Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91787724

Identifier: 91787724

GI number: 91787724

Start: 1906808

End: 1907440

Strand: Reverse

Name: 91787724

Synonym: Bpro_1845

Alternate gene names: NA

Gene position: 1907440-1906808 (Counterclockwise)

Preceding gene: 91787725

Following gene: 91787723

Centisome position: 36.68

GC content: 58.93

Gene sequence:

>633_bases
ATGGCACAGGCAAACTGGCGTCTCGAAGGTGAATGGATCAAGAACTGCAACTGCGCATTTGGCTGCCCCTGCGATTTCAA
CGCGCCGCCCACCAAGGGCTACTGCGAAGGCCTGCTCGGGATGCGGATCACCAAGGGAAACTTTGAAGACACGCGCCTTG
ACGGACTGAGTTTTTTTGTGACGGTGCGCTTTCCTGGCGCATTGCACGAAGGAAACGGACAGGCCCAACCGATCATCGAA
GAGCGCGCGACACCGGCGCAACGCGAGGCTTTGTTTTCGATCATGTCGGGCAAGAACTCGGCGGAAGGAACGCTGTTCAA
TATCTTCAGCCTGATCGTCACCAAGATGCACGATCCGATCTTCGCGCCCGTGAGTTTCGAGTTTGACAAGAAGGCCCGGA
CCGCACGCCTGAGCATTCCCGGCGTGCTTGAAACCGACGTCGAACCAATCAAGAACCCGGTGACCGGGGCACCGCATCGC
ATTCAGGTCGTGATGCCGGAGGGGTTCGAGCACATCGAGGGTGAGATCGCATCGGCCAACATCCACAGCACCGGCGCGAT
TCCGTTCGACACCACAGGGTCGCACAGTACGCTTGCCCATGTTGTCCAGACTCCGCAGGGCGTTGTCGCCTGA

Upstream 100 bases:

>100_bases
GCATGCGTTTTGCGTTCGGCCGGGTTTGCAGGAGGAGTTGCAGATTCAAAAAACAACTCTCGCTGCATTTGTTGAAAACG
GCAAACAGGAGGATGCGATC

Downstream 100 bases:

>100_bases
CCGGGCGGCGGCCTTCCCGGCGCGTAGCCACGACAAATGGGCATGGCCAGTGCGAGCGTTGAAAAGGCATTGAAGCACGA
CCGGCTGCTGGTTATTTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MAQANWRLEGEWIKNCNCAFGCPCDFNAPPTKGYCEGLLGMRITKGNFEDTRLDGLSFFVTVRFPGALHEGNGQAQPIIE
ERATPAQREALFSIMSGKNSAEGTLFNIFSLIVTKMHDPIFAPVSFEFDKKARTARLSIPGVLETDVEPIKNPVTGAPHR
IQVVMPEGFEHIEGEIASANIHSTGAIPFDTTGSHSTLAHVVQTPQGVVA

Sequences:

>Translated_210_residues
MAQANWRLEGEWIKNCNCAFGCPCDFNAPPTKGYCEGLLGMRITKGNFEDTRLDGLSFFVTVRFPGALHEGNGQAQPIIE
ERATPAQREALFSIMSGKNSAEGTLFNIFSLIVTKMHDPIFAPVSFEFDKKARTARLSIPGVLETDVEPIKNPVTGAPHR
IQVVMPEGFEHIEGEIASANIHSTGAIPFDTTGSHSTLAHVVQTPQGVVA
>Mature_209_residues
AQANWRLEGEWIKNCNCAFGCPCDFNAPPTKGYCEGLLGMRITKGNFEDTRLDGLSFFVTVRFPGALHEGNGQAQPIIEE
RATPAQREALFSIMSGKNSAEGTLFNIFSLIVTKMHDPIFAPVSFEFDKKARTARLSIPGVLETDVEPIKNPVTGAPHRI
QVVMPEGFEHIEGEIASANIHSTGAIPFDTTGSHSTLAHVVQTPQGVVA

Specific function: Unknown

COG id: COG5588

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22796; Mature: 22665

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQANWRLEGEWIKNCNCAFGCPCDFNAPPTKGYCEGLLGMRITKGNFEDTRLDGLSFFV
CCCCCEEECCHHHCCCCCEECCCCCCCCCCCCHHHHHHHCEEEECCCCCCCEECCEEEEE
TVRFPGALHEGNGQAQPIIEERATPAQREALFSIMSGKNSAEGTLFNIFSLIVTKMHDPI
EEECCCEEECCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCE
FAPVSFEFDKKARTARLSIPGVLETDVEPIKNPVTGAPHRIQVVMPEGFEHIEGEIASAN
ECCEEECCCCCCCEEEECCCCCCCCCCHHHCCCCCCCCCEEEEECCCCCHHHCCEEEECC
IHSTGAIPFDTTGSHSTLAHVVQTPQGVVA
CCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AQANWRLEGEWIKNCNCAFGCPCDFNAPPTKGYCEGLLGMRITKGNFEDTRLDGLSFFV
CCCCEEECCHHHCCCCCEECCCCCCCCCCCCHHHHHHHCEEEECCCCCCCEECCEEEEE
TVRFPGALHEGNGQAQPIIEERATPAQREALFSIMSGKNSAEGTLFNIFSLIVTKMHDPI
EEECCCEEECCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCE
FAPVSFEFDKKARTARLSIPGVLETDVEPIKNPVTGAPHRIQVVMPEGFEHIEGEIASAN
ECCEEECCCCCCCEEEECCCCCCCCCCHHHCCCCCCCCCEEEEECCCCCHHHCCEEEECC
IHSTGAIPFDTTGSHSTLAHVVQTPQGVVA
CCCCCCCCCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA