Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is folA [H]
Identifier: 91787701
GI number: 91787701
Start: 1886763
End: 1887257
Strand: Reverse
Name: folA [H]
Synonym: Bpro_1822
Alternate gene names: 91787701
Gene position: 1887257-1886763 (Counterclockwise)
Preceding gene: 91787702
Following gene: 91787700
Centisome position: 36.29
GC content: 58.99
Gene sequence:
>495_bases ATGCGCATCAACATGATTTTTGCCCGCGCCGCCAACGGCGTGATCGGCAACAACAATCGCATGCCCTGGCATCTGCCGGA AGACATGGCCCACTTCAAGCGCCTGACCCAGGGCTGGCCCGTCATCATGGGGCGAAAGACCTGGGACTCACTGCCGCCCA AATTCCGCCCCCTGCCCGGCCGCACCAATATTGTCATCACCCGGCAGCAGGACTGGAAAGAAGATGGCGCCGAGCCAGCA GCCAGCCTGGCCGACGCTTTGAGCCTTTGCGGGCAGTCTGAAGAAGTCTGGGTCATCGGTGGCGCGCAAATTTACGCGCA AGCCAAGCCCCTGGCGCAGCGCATCGAAGTCACCGAAATTGCCCAGGACTTTGAAGGGGATGCCTTTGCGCCCCCGCTGG GTTCCGAATGGATTGAAGCTGCGCGTGAGGATCACATCTCCTCCAATGGGCTGAAGTTCAGTTTTATCACTTACGACAAA CACAAAGGGAATTGA
Upstream 100 bases:
>100_bases GCGCAAGCCCGAGTCGATCTTCGACTACCAGTTCGACGATTTCGAGTTCCTTGACTACCAGCACCATGCGGCCATCAAGG CGCCGGTAGCGGTGTAGTTC
Downstream 100 bases:
>100_bases CATGTCAGGAGCCGGATTTCACGTCCACGGGCCGCACGACCACGAGCTGGAGCATGCCGCCCAAGGCGCTCATGGCGCAG CACACGACGGCGGCGGCGGC
Product: dihydrofolate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MRINMIFARAANGVIGNNNRMPWHLPEDMAHFKRLTQGWPVIMGRKTWDSLPPKFRPLPGRTNIVITRQQDWKEDGAEPA ASLADALSLCGQSEEVWVIGGAQIYAQAKPLAQRIEVTEIAQDFEGDAFAPPLGSEWIEAAREDHISSNGLKFSFITYDK HKGN
Sequences:
>Translated_164_residues MRINMIFARAANGVIGNNNRMPWHLPEDMAHFKRLTQGWPVIMGRKTWDSLPPKFRPLPGRTNIVITRQQDWKEDGAEPA ASLADALSLCGQSEEVWVIGGAQIYAQAKPLAQRIEVTEIAQDFEGDAFAPPLGSEWIEAAREDHISSNGLKFSFITYDK HKGN >Mature_164_residues MRINMIFARAANGVIGNNNRMPWHLPEDMAHFKRLTQGWPVIMGRKTWDSLPPKFRPLPGRTNIVITRQQDWKEDGAEPA ASLADALSLCGQSEEVWVIGGAQIYAQAKPLAQRIEVTEIAQDFEGDAFAPPLGSEWIEAAREDHISSNGLKFSFITYDK HKGN
Specific function: Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis [H]
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DHFR (dihydrofolate reductase) domain [H]
Homologues:
Organism=Homo sapiens, GI4503323, Length=182, Percent_Identity=36.2637362637363, Blast_Score=96, Evalue=1e-20, Organism=Homo sapiens, GI28827793, Length=146, Percent_Identity=36.986301369863, Blast_Score=79, Evalue=2e-15, Organism=Escherichia coli, GI1786233, Length=129, Percent_Identity=44.9612403100775, Blast_Score=107, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17505899, Length=178, Percent_Identity=35.9550561797753, Blast_Score=99, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6324810, Length=151, Percent_Identity=33.112582781457, Blast_Score=81, Evalue=8e-17, Organism=Drosophila melanogaster, GI116008026, Length=180, Percent_Identity=31.6666666666667, Blast_Score=94, Evalue=5e-20, Organism=Drosophila melanogaster, GI24647458, Length=180, Percent_Identity=31.6666666666667, Blast_Score=94, Evalue=5e-20,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 10,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012259 - InterPro: IPR017925 - InterPro: IPR001796 [H]
Pfam domain/function: PF00186 DHFR_1 [H]
EC number: =1.5.1.3 [H]
Molecular weight: Translated: 18371; Mature: 18371
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00075 DHFR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRINMIFARAANGVIGNNNRMPWHLPEDMAHFKRLTQGWPVIMGRKTWDSLPPKFRPLPG CEEEEEEEECCCCEECCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCC RTNIVITRQQDWKEDGAEPAASLADALSLCGQSEEVWVIGGAQIYAQAKPLAQRIEVTEI CCCEEEECCCCCHHCCCCHHHHHHHHHHHCCCCCCEEEEECCEEEEHHHHHHHHHHHHHH AQDFEGDAFAPPLGSEWIEAAREDHISSNGLKFSFITYDKHKGN HHHCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCC >Mature Secondary Structure MRINMIFARAANGVIGNNNRMPWHLPEDMAHFKRLTQGWPVIMGRKTWDSLPPKFRPLPG CEEEEEEEECCCCEECCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCC RTNIVITRQQDWKEDGAEPAASLADALSLCGQSEEVWVIGGAQIYAQAKPLAQRIEVTEI CCCEEEECCCCCHHCCCCHHHHHHHHHHHCCCCCCEEEEECCEEEEHHHHHHHHHHHHHH AQDFEGDAFAPPLGSEWIEAAREDHISSNGLKFSFITYDKHKGN HHHCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6434541 [H]