Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91787700
Identifier: 91787700
GI number: 91787700
Start: 1886165
End: 1886761
Strand: Reverse
Name: 91787700
Synonym: Bpro_1821
Alternate gene names: NA
Gene position: 1886761-1886165 (Counterclockwise)
Preceding gene: 91787701
Following gene: 91787699
Centisome position: 36.28
GC content: 61.47
Gene sequence:
>597_bases ATGTCAGGAGCCGGATTTCACGTCCACGGGCCGCACGACCACGAGCTGGAGCATGCCGCCCAAGGCGCTCATGGCGCAGC ACACGACGGCGGCGGCGGCATGATCGCCCAGATCGCCGTCGTGACGGCCATCATTGCGACCGTGGGGGCCATTTTTGCCT ACATGGGCGGTGCGACCCAGGCCAATGCAGGCCTGTATAAAAATAACGCCGCCATCAAAAAAACCGAAGCCTCCAATCAG TGGAATTACTTTCAGGCCAAGAGCACCAAGCAGTCGCTCGCCGAATTCGCCCGCGATCTGGCGCCTGAAGACAGGAAGGC CGGCTACCTGAGCAAGATCGAGCGCTACGAAAAAGAGAAGAACGAAATCAAGACAGCCGCCGAGAAACTGGAGGCTGAAG CCGCCACTTGGGACAAGTCGTCGGACGACCAGATGCATCAGCACCACCGCTGGGCACAGGCCACCACGGTGCTGCAGGTC TCCATCGCGCTGGCGGCCATTGCCCTGCTGACACGCAAGCGTTGGCTGGAATATGGCATGTTCGCGCTGGCCGGCGTGGG CATGGCGGTCGGCGCGCTCGCGTTGCTGCATATTTGA
Upstream 100 bases:
>100_bases CTGGGTTCCGAATGGATTGAAGCTGCGCGTGAGGATCACATCTCCTCCAATGGGCTGAAGTTCAGTTTTATCACTTACGA CAAACACAAAGGGAATTGAC
Downstream 100 bases:
>100_bases TAGCATCTCCTCCTTATCTTGCTTGCCCTGGAACACCAAAACCATGAAAATCGCCACCTGGAATGTCAACTCGCTGGCCG TGCGGCTGCCGCAGGTCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Tranmembrane Protein
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MSGAGFHVHGPHDHELEHAAQGAHGAAHDGGGGMIAQIAVVTAIIATVGAIFAYMGGATQANAGLYKNNAAIKKTEASNQ WNYFQAKSTKQSLAEFARDLAPEDRKAGYLSKIERYEKEKNEIKTAAEKLEAEAATWDKSSDDQMHQHHRWAQATTVLQV SIALAAIALLTRKRWLEYGMFALAGVGMAVGALALLHI
Sequences:
>Translated_198_residues MSGAGFHVHGPHDHELEHAAQGAHGAAHDGGGGMIAQIAVVTAIIATVGAIFAYMGGATQANAGLYKNNAAIKKTEASNQ WNYFQAKSTKQSLAEFARDLAPEDRKAGYLSKIERYEKEKNEIKTAAEKLEAEAATWDKSSDDQMHQHHRWAQATTVLQV SIALAAIALLTRKRWLEYGMFALAGVGMAVGALALLHI >Mature_197_residues SGAGFHVHGPHDHELEHAAQGAHGAAHDGGGGMIAQIAVVTAIIATVGAIFAYMGGATQANAGLYKNNAAIKKTEASNQW NYFQAKSTKQSLAEFARDLAPEDRKAGYLSKIERYEKEKNEIKTAAEKLEAEAATWDKSSDDQMHQHHRWAQATTVLQVS IALAAIALLTRKRWLEYGMFALAGVGMAVGALALLHI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21263; Mature: 21132
Theoretical pI: Translated: 7.46; Mature: 7.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGAGFHVHGPHDHELEHAAQGAHGAAHDGGGGMIAQIAVVTAIIATVGAIFAYMGGATQ CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC ANAGLYKNNAAIKKTEASNQWNYFQAKSTKQSLAEFARDLAPEDRKAGYLSKIERYEKEK CCCCEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH NEIKTAAEKLEAEAATWDKSSDDQMHQHHRWAQATTVLQVSIALAAIALLTRKRWLEYGM HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FALAGVGMAVGALALLHI HHHHHHHHHHHHHHHHCC >Mature Secondary Structure SGAGFHVHGPHDHELEHAAQGAHGAAHDGGGGMIAQIAVVTAIIATVGAIFAYMGGATQ CCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC ANAGLYKNNAAIKKTEASNQWNYFQAKSTKQSLAEFARDLAPEDRKAGYLSKIERYEKEK CCCCEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH NEIKTAAEKLEAEAATWDKSSDDQMHQHHRWAQATTVLQVSIALAAIALLTRKRWLEYGM HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FALAGVGMAVGALALLHI HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA