Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91787676
Identifier: 91787676
GI number: 91787676
Start: 1855886
End: 1856461
Strand: Reverse
Name: 91787676
Synonym: Bpro_1794
Alternate gene names: NA
Gene position: 1856461-1855886 (Counterclockwise)
Preceding gene: 91787677
Following gene: 91787675
Centisome position: 35.7
GC content: 56.94
Gene sequence:
>576_bases ATGAAAAAACTGATCACCACACTGGCGATGGCCGGCCTTGCCTGCTCCACCGCCATTCATGCGCAAACGCCAGACCCGAA AACCGAATGGGCCACCAAAGTCGTCGCCCTGCAGCAAGGCCCGGAGCTTGACAGGCTCGTAGCTCAGCTCGCGGGCAGTA CGGCCCAGGAACTGATCGCCAATTGGGGCCCCAAGCTGGAGGCGAATGTACCCAAGGCCAAACAGCAAAAAGCGTCGGAT GATCTCAACGCAGAACTCAAAAAGTATGCCGAAGACACCAACAAGCTGATTGGCAAACAGGTCAGCAAAGTCAGCAGCGA CGTCCTGGTACCCGCTTATGCGGAGCGTTTTACGGTCGACGAGCTCAAACAGATCGCCGCCTTTTTCGAGTCTCCTGCCA TCAAGAAATACCAGGCCAGCACACCAGAGCTGGGCAGTATCTTCATAAAGAAACTGGTCGAAGCATCGCGCGCCGATGTG GTCGCCCGCGTCAAGCAGTTTGATGATGCCGCACTGAAAATTGTCGGCCCCGCACCTGCGGCACCAGGGGCGAGCAAGCC ACCCGCCAAAAAATAA
Upstream 100 bases:
>100_bases CCCTGGACGACAACGACGTTGAAAACGACGCAGGCAAGGACGCCTCGACTCCGCTCTAACGCTCTAACCACCTTAATCTG TCCCAATCCGGAAGCTATTC
Downstream 100 bases:
>100_bases CCCGATCCTAATGACCCGACCCTTCAATTTTTCCGCCGGCCCCGCGAATTTGCCTGAAGAGGTTTTGCAGCAGGCCGCCG CCGAAATGCTGGACTGGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MKKLITTLAMAGLACSTAIHAQTPDPKTEWATKVVALQQGPELDRLVAQLAGSTAQELIANWGPKLEANVPKAKQQKASD DLNAELKKYAEDTNKLIGKQVSKVSSDVLVPAYAERFTVDELKQIAAFFESPAIKKYQASTPELGSIFIKKLVEASRADV VARVKQFDDAALKIVGPAPAAPGASKPPAKK
Sequences:
>Translated_191_residues MKKLITTLAMAGLACSTAIHAQTPDPKTEWATKVVALQQGPELDRLVAQLAGSTAQELIANWGPKLEANVPKAKQQKASD DLNAELKKYAEDTNKLIGKQVSKVSSDVLVPAYAERFTVDELKQIAAFFESPAIKKYQASTPELGSIFIKKLVEASRADV VARVKQFDDAALKIVGPAPAAPGASKPPAKK >Mature_191_residues MKKLITTLAMAGLACSTAIHAQTPDPKTEWATKVVALQQGPELDRLVAQLAGSTAQELIANWGPKLEANVPKAKQQKASD DLNAELKKYAEDTNKLIGKQVSKVSSDVLVPAYAERFTVDELKQIAAFFESPAIKKYQASTPELGSIFIKKLVEASRADV VARVKQFDDAALKIVGPAPAAPGASKPPAKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20421; Mature: 20421
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLITTLAMAGLACSTAIHAQTPDPKTEWATKVVALQQGPELDRLVAQLAGSTAQELIA CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHH NWGPKLEANVPKAKQQKASDDLNAELKKYAEDTNKLIGKQVSKVSSDVLVPAYAERFTVD HCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHH ELKQIAAFFESPAIKKYQASTPELGSIFIKKLVEASRADVVARVKQFDDAALKIVGPAPA HHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEECCCCC APGASKPPAKK CCCCCCCCCCC >Mature Secondary Structure MKKLITTLAMAGLACSTAIHAQTPDPKTEWATKVVALQQGPELDRLVAQLAGSTAQELIA CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHH NWGPKLEANVPKAKQQKASDDLNAELKKYAEDTNKLIGKQVSKVSSDVLVPAYAERFTVD HCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHH ELKQIAAFFESPAIKKYQASTPELGSIFIKKLVEASRADVVARVKQFDDAALKIVGPAPA HHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEECCCCC APGASKPPAKK CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA