Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91787676

Identifier: 91787676

GI number: 91787676

Start: 1855886

End: 1856461

Strand: Reverse

Name: 91787676

Synonym: Bpro_1794

Alternate gene names: NA

Gene position: 1856461-1855886 (Counterclockwise)

Preceding gene: 91787677

Following gene: 91787675

Centisome position: 35.7

GC content: 56.94

Gene sequence:

>576_bases
ATGAAAAAACTGATCACCACACTGGCGATGGCCGGCCTTGCCTGCTCCACCGCCATTCATGCGCAAACGCCAGACCCGAA
AACCGAATGGGCCACCAAAGTCGTCGCCCTGCAGCAAGGCCCGGAGCTTGACAGGCTCGTAGCTCAGCTCGCGGGCAGTA
CGGCCCAGGAACTGATCGCCAATTGGGGCCCCAAGCTGGAGGCGAATGTACCCAAGGCCAAACAGCAAAAAGCGTCGGAT
GATCTCAACGCAGAACTCAAAAAGTATGCCGAAGACACCAACAAGCTGATTGGCAAACAGGTCAGCAAAGTCAGCAGCGA
CGTCCTGGTACCCGCTTATGCGGAGCGTTTTACGGTCGACGAGCTCAAACAGATCGCCGCCTTTTTCGAGTCTCCTGCCA
TCAAGAAATACCAGGCCAGCACACCAGAGCTGGGCAGTATCTTCATAAAGAAACTGGTCGAAGCATCGCGCGCCGATGTG
GTCGCCCGCGTCAAGCAGTTTGATGATGCCGCACTGAAAATTGTCGGCCCCGCACCTGCGGCACCAGGGGCGAGCAAGCC
ACCCGCCAAAAAATAA

Upstream 100 bases:

>100_bases
CCCTGGACGACAACGACGTTGAAAACGACGCAGGCAAGGACGCCTCGACTCCGCTCTAACGCTCTAACCACCTTAATCTG
TCCCAATCCGGAAGCTATTC

Downstream 100 bases:

>100_bases
CCCGATCCTAATGACCCGACCCTTCAATTTTTCCGCCGGCCCCGCGAATTTGCCTGAAGAGGTTTTGCAGCAGGCCGCCG
CCGAAATGCTGGACTGGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MKKLITTLAMAGLACSTAIHAQTPDPKTEWATKVVALQQGPELDRLVAQLAGSTAQELIANWGPKLEANVPKAKQQKASD
DLNAELKKYAEDTNKLIGKQVSKVSSDVLVPAYAERFTVDELKQIAAFFESPAIKKYQASTPELGSIFIKKLVEASRADV
VARVKQFDDAALKIVGPAPAAPGASKPPAKK

Sequences:

>Translated_191_residues
MKKLITTLAMAGLACSTAIHAQTPDPKTEWATKVVALQQGPELDRLVAQLAGSTAQELIANWGPKLEANVPKAKQQKASD
DLNAELKKYAEDTNKLIGKQVSKVSSDVLVPAYAERFTVDELKQIAAFFESPAIKKYQASTPELGSIFIKKLVEASRADV
VARVKQFDDAALKIVGPAPAAPGASKPPAKK
>Mature_191_residues
MKKLITTLAMAGLACSTAIHAQTPDPKTEWATKVVALQQGPELDRLVAQLAGSTAQELIANWGPKLEANVPKAKQQKASD
DLNAELKKYAEDTNKLIGKQVSKVSSDVLVPAYAERFTVDELKQIAAFFESPAIKKYQASTPELGSIFIKKLVEASRADV
VARVKQFDDAALKIVGPAPAAPGASKPPAKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20421; Mature: 20421

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLITTLAMAGLACSTAIHAQTPDPKTEWATKVVALQQGPELDRLVAQLAGSTAQELIA
CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHH
NWGPKLEANVPKAKQQKASDDLNAELKKYAEDTNKLIGKQVSKVSSDVLVPAYAERFTVD
HCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHH
ELKQIAAFFESPAIKKYQASTPELGSIFIKKLVEASRADVVARVKQFDDAALKIVGPAPA
HHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEECCCCC
APGASKPPAKK
CCCCCCCCCCC
>Mature Secondary Structure
MKKLITTLAMAGLACSTAIHAQTPDPKTEWATKVVALQQGPELDRLVAQLAGSTAQELIA
CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHH
NWGPKLEANVPKAKQQKASDDLNAELKKYAEDTNKLIGKQVSKVSSDVLVPAYAERFTVD
HCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHH
ELKQIAAFFESPAIKKYQASTPELGSIFIKKLVEASRADVVARVKQFDDAALKIVGPAPA
HHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEECCCCC
APGASKPPAKK
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA