Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787326

Identifier: 91787326

GI number: 91787326

Start: 1478560

End: 1479702

Strand: Direct

Name: 91787326

Synonym: Bpro_1431

Alternate gene names: NA

Gene position: 1478560-1479702 (Clockwise)

Preceding gene: 91787325

Following gene: 91787327

Centisome position: 28.43

GC content: 64.04

Gene sequence:

>1143_bases
ATGATGCGTTTGCAGTTCCTGATTCATAGCCTTCGTAGCCTGGCTGTTGCCGGTGCCCTGGCCGCGCCGCTGGCAGCCCA
TGCCGTCCAGATCGTTGTCGGGCAGGTGGCCCCCTTGTCCGGTCTCGAGGGCACGCAGGCCCGTGCCTATTCAACCGGCA
TCCAGCTGGCCCTGAACAAGGCCAACAAGGCGGGCGGCGTGAATGGCCACACCTTCAGCCTGGTCCGCAAGAACGATTCG
GGCAGCCCCGCTGAAAACATGGCCGCCACCCGGCAGTTGCTCGGAGAGAACCGTCCACTCGTACTGGCCGGTTATTTCGG
CGACCATGTGATTGGCGAACTGGTCAGCTCCGGCCTGCTCGAAAAGGAAAATATCCCGCTGGTGGGCTACCGCGTGAACG
AGATCAGGGCCGAGGCGCCCCTGCTTTATAGCGTCCGTGCGAATCTGCGCGATGAGATCAACAAGATCACCGAACATCTG
GTCACGGTCGGTATCACCCGCATTGGCCTCTTTTACCAGGATGGCCCCGGCGCCGCCTCGTTGATGGCCGCGACCGACGA
GGTGATGAAGAGCAAGGGCGCCCACATCACGGCCAGGGGCGCTTACGCGGCCGGCACGGCCAAGGTCCCGAATGCGGTGC
TTGACACCTTCATTGCCGCGGCGCCGCAGGCGATCATCATCGTCGCCAGCGGCTCCGCGGCGGCCGCCTTTATTGAAAAA
TACCAGGGAGGTGGCGGCACGGCGCGCCTGTTTGCCCACTCCGGCGCAGACATAGAGCAGATCTCCAAGCGTCTGGGCGA
GGCCCAGCTCAAGGGGCTGGCCATCACCCAGGTCACGCCCAACCCCTACAAGATTTCAGGCCGGTTGAACAAGGAGTTCA
TCGACCTGGCGGGCGGCACCCCTGACCTGGAAGTACCGGTGAGCTACGCCATGATGGAGGGCTACATTGCCGGCACGGTG
ATTGTGGAGGCCGTGCGGCGCATGGGGGCCCGTGTCTCCCGCGACGGGTTGGTCAAAGCGCTCGACGGTCTGGACAACTT
CGACCTGGGCGGCTACAAGGTCGGCTTCAAGCCCGGCGTGCGTTCCGGCTCGCGGTTTGTGGAGCTGACCATCGTCACCG
AGGCCGGACGTATCCGGCAGTGA

Upstream 100 bases:

>100_bases
CAGCGACCGTTCCCTATATCCCAAAGCAAAAAAAACCGGTGGTCACTGCGGCCTGTTCAGTCCGCCCGGCTGGCCACGCC
CCCATGAGGAGGAGAAATCC

Downstream 100 bases:

>100_bases
TCTGGCCGGCATGACCGCCTCAGCGCGGTCTGTCGCTGCGTGCCGGGCTGTTTTTCGTGGAGACCCGCCGCCCGCTGATG
GCGGCGTTGACCAGGGGAAC

Product: putative substrate-binding periplasmic (PBP) ABC transporter protein

Products: NA

Alternate protein names: Lipoprotein

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MMRLQFLIHSLRSLAVAGALAAPLAAHAVQIVVGQVAPLSGLEGTQARAYSTGIQLALNKANKAGGVNGHTFSLVRKNDS
GSPAENMAATRQLLGENRPLVLAGYFGDHVIGELVSSGLLEKENIPLVGYRVNEIRAEAPLLYSVRANLRDEINKITEHL
VTVGITRIGLFYQDGPGAASLMAATDEVMKSKGAHITARGAYAAGTAKVPNAVLDTFIAAAPQAIIIVASGSAAAAFIEK
YQGGGGTARLFAHSGADIEQISKRLGEAQLKGLAITQVTPNPYKISGRLNKEFIDLAGGTPDLEVPVSYAMMEGYIAGTV
IVEAVRRMGARVSRDGLVKALDGLDNFDLGGYKVGFKPGVRSGSRFVELTIVTEAGRIRQ

Sequences:

>Translated_380_residues
MMRLQFLIHSLRSLAVAGALAAPLAAHAVQIVVGQVAPLSGLEGTQARAYSTGIQLALNKANKAGGVNGHTFSLVRKNDS
GSPAENMAATRQLLGENRPLVLAGYFGDHVIGELVSSGLLEKENIPLVGYRVNEIRAEAPLLYSVRANLRDEINKITEHL
VTVGITRIGLFYQDGPGAASLMAATDEVMKSKGAHITARGAYAAGTAKVPNAVLDTFIAAAPQAIIIVASGSAAAAFIEK
YQGGGGTARLFAHSGADIEQISKRLGEAQLKGLAITQVTPNPYKISGRLNKEFIDLAGGTPDLEVPVSYAMMEGYIAGTV
IVEAVRRMGARVSRDGLVKALDGLDNFDLGGYKVGFKPGVRSGSRFVELTIVTEAGRIRQ
>Mature_380_residues
MMRLQFLIHSLRSLAVAGALAAPLAAHAVQIVVGQVAPLSGLEGTQARAYSTGIQLALNKANKAGGVNGHTFSLVRKNDS
GSPAENMAATRQLLGENRPLVLAGYFGDHVIGELVSSGLLEKENIPLVGYRVNEIRAEAPLLYSVRANLRDEINKITEHL
VTVGITRIGLFYQDGPGAASLMAATDEVMKSKGAHITARGAYAAGTAKVPNAVLDTFIAAAPQAIIIVASGSAAAAFIEK
YQGGGGTARLFAHSGADIEQISKRLGEAQLKGLAITQVTPNPYKISGRLNKEFIDLAGGTPDLEVPVSYAMMEGYIAGTV
IVEAVRRMGARVSRDGLVKALDGLDNFDLGGYKVGFKPGVRSGSRFVELTIVTEAGRIRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39914; Mature: 39914

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRLQFLIHSLRSLAVAGALAAPLAAHAVQIVVGQVAPLSGLEGTQARAYSTGIQLALNK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCEEEEEEC
ANKAGGVNGHTFSLVRKNDSGSPAENMAATRQLLGENRPLVLAGYFGDHVIGELVSSGLL
CCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCC
EKENIPLVGYRVNEIRAEAPLLYSVRANLRDEINKITEHLVTVGITRIGLFYQDGPGAAS
CCCCCCEEEEEHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHH
LMAATDEVMKSKGAHITARGAYAAGTAKVPNAVLDTFIAAAPQAIIIVASGSAAAAFIEK
HHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHH
YQGGGGTARLFAHSGADIEQISKRLGEAQLKGLAITQVTPNPYKISGRLNKEFIDLAGGT
HCCCCCEEEEEEECCCCHHHHHHHHCHHHHCCEEEEEECCCCEEEECCCCCHHHHHCCCC
PDLEVPVSYAMMEGYIAGTVIVEAVRRMGARVSRDGLVKALDGLDNFDLGGYKVGFKPGV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCEEECCCCCC
RSGSRFVELTIVTEAGRIRQ
CCCCEEEEEEEEECCCCCCC
>Mature Secondary Structure
MMRLQFLIHSLRSLAVAGALAAPLAAHAVQIVVGQVAPLSGLEGTQARAYSTGIQLALNK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCEEEEEEC
ANKAGGVNGHTFSLVRKNDSGSPAENMAATRQLLGENRPLVLAGYFGDHVIGELVSSGLL
CCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCC
EKENIPLVGYRVNEIRAEAPLLYSVRANLRDEINKITEHLVTVGITRIGLFYQDGPGAAS
CCCCCCEEEEEHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHH
LMAATDEVMKSKGAHITARGAYAAGTAKVPNAVLDTFIAAAPQAIIIVASGSAAAAFIEK
HHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHH
YQGGGGTARLFAHSGADIEQISKRLGEAQLKGLAITQVTPNPYKISGRLNKEFIDLAGGT
HCCCCCEEEEEEECCCCHHHHHHHHCHHHHCCEEEEEECCCCEEEECCCCCHHHHHCCCC
PDLEVPVSYAMMEGYIAGTVIVEAVRRMGARVSRDGLVKALDGLDNFDLGGYKVGFKPGV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCEEECCCCCC
RSGSRFVELTIVTEAGRIRQ
CCCCEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA