Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91787325
Identifier: 91787325
GI number: 91787325
Start: 1477103
End: 1478320
Strand: Direct
Name: 91787325
Synonym: Bpro_1430
Alternate gene names: NA
Gene position: 1477103-1478320 (Clockwise)
Preceding gene: 91787324
Following gene: 91787326
Centisome position: 28.4
GC content: 63.14
Gene sequence:
>1218_bases ATGGAAAACTACCTTCTCGACTGGGCCAACCTGCTGCTGCGCTGGGTCCATGTCATCACCGCCATCGCCTGGGTCGGTTC CTCGTTTTATTTTGTCTTTCTCGATTCCAGCCTGACGCCGCCGGAAGACGAAGACCTGAAGCGACAGGGTGTCAGCGGCG AGCTCTGGGCGGTGCACGGCGGCGGGTTTTATCACCCGGTCAAGTTCGCGGTCAAACCGCCGCAGTTGCCGGCGCACCTG CACTGGTTTTACTGGGAAAGCTACAGCACCTGGTTGTCGGGTTTTGCGCTCTTCACCATCTCCTACCTCTGGAACGCCGG CACCTACCTGATCGACAAGTCCCTGATGAACTGGTCGACGGGTGCGGCTGTCGGTGTGGCGCTGTCTTTCCTGGTGGTGT TCTGGATGCTGTATGACGGCATCTGCCAGCTGTGGGGCCAGCGCAAAAATGGCGATGCCGTGGTGGGGGCGCTGGTTGCG CTGCTGGTGGTCATCGCGTCCTGGCTCGCCTGCCACTGGTTTGCCGGGCGCGCGGCTTTCCTGCTGGTGGGCGCCATGGT GGCCACGGCCATGAGCGCCAATGTCTTTTTCTGGATCATCCCGGGCCAGCGCAAGGTGATTGCAAGCATCAAGGCCGGTG AGCCGGTGGACCCGGTGCACGGCCTGCGCGGCAAGCAGCGCAGCGTGCACAACACCTACTTCACGCTGCCGGTGCTGTTT GCCATGCTGAGCAACCACTACAGTTTTACCTGGAGTCATCCGCAGAACTGGCTGGTGCTCATCCTGATGATGCTGGCCGG CGCCGCCATCCGCCAGTTCTTTGTGCTGCGCCATGGCTACAAGCTGGGCCGCAACCGCCACCCGCTGCCTTATGCGCTGA CCGGGGTGGCGGTAATCATCGGCGCGATCGTCTGGATGAATCCGGTTGCCACTGGATCGATGGCGACTGGCCAAAGTGGT GCGGGGGCTGACGGCGCCGGCAGTTATGCAGCGGTGCAGAAGGTGCTGGCCCAGCGCTGCTACCAGTGCCATGGCGAGCA GGTGCAGATGAAAAACGTGCGGCTGGACTCGCCGGAGCAGCTCAGCCGGCATGCGCAAGCCGTGTACCAGCAGGTCGTGG TGAGCAAGGCCATGCCCATGAACAATGCCACTGGCATGACCGACGCGGAGCGCGAGCTGCTCCGGCGGTGGTTTGAGGCG GGTGCCCGGACGCCCTGA
Upstream 100 bases:
>100_bases GGCCGCAGCGGAGCCGGGAAACGACTGTTTCTTTTGTTCGCGGCCTAATTTCTGCTTACAGCGCCCGCAGTGGTGAGCAG GTTTGCATAGGTTGAGAGAT
Downstream 100 bases:
>100_bases TCCGCTGATCGGCCACCACAACTGTCGCGCAGCAAGGCGCGGCGCATCTGCGTAATTTCACGTACCGGCATCGCCGGATC CCGTGCTTCAATTCGTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Cytochrome C Subfamily; Cytochrome C Region
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MENYLLDWANLLLRWVHVITAIAWVGSSFYFVFLDSSLTPPEDEDLKRQGVSGELWAVHGGGFYHPVKFAVKPPQLPAHL HWFYWESYSTWLSGFALFTISYLWNAGTYLIDKSLMNWSTGAAVGVALSFLVVFWMLYDGICQLWGQRKNGDAVVGALVA LLVVIASWLACHWFAGRAAFLLVGAMVATAMSANVFFWIIPGQRKVIASIKAGEPVDPVHGLRGKQRSVHNTYFTLPVLF AMLSNHYSFTWSHPQNWLVLILMMLAGAAIRQFFVLRHGYKLGRNRHPLPYALTGVAVIIGAIVWMNPVATGSMATGQSG AGADGAGSYAAVQKVLAQRCYQCHGEQVQMKNVRLDSPEQLSRHAQAVYQQVVVSKAMPMNNATGMTDAERELLRRWFEA GARTP
Sequences:
>Translated_405_residues MENYLLDWANLLLRWVHVITAIAWVGSSFYFVFLDSSLTPPEDEDLKRQGVSGELWAVHGGGFYHPVKFAVKPPQLPAHL HWFYWESYSTWLSGFALFTISYLWNAGTYLIDKSLMNWSTGAAVGVALSFLVVFWMLYDGICQLWGQRKNGDAVVGALVA LLVVIASWLACHWFAGRAAFLLVGAMVATAMSANVFFWIIPGQRKVIASIKAGEPVDPVHGLRGKQRSVHNTYFTLPVLF AMLSNHYSFTWSHPQNWLVLILMMLAGAAIRQFFVLRHGYKLGRNRHPLPYALTGVAVIIGAIVWMNPVATGSMATGQSG AGADGAGSYAAVQKVLAQRCYQCHGEQVQMKNVRLDSPEQLSRHAQAVYQQVVVSKAMPMNNATGMTDAERELLRRWFEA GARTP >Mature_405_residues MENYLLDWANLLLRWVHVITAIAWVGSSFYFVFLDSSLTPPEDEDLKRQGVSGELWAVHGGGFYHPVKFAVKPPQLPAHL HWFYWESYSTWLSGFALFTISYLWNAGTYLIDKSLMNWSTGAAVGVALSFLVVFWMLYDGICQLWGQRKNGDAVVGALVA LLVVIASWLACHWFAGRAAFLLVGAMVATAMSANVFFWIIPGQRKVIASIKAGEPVDPVHGLRGKQRSVHNTYFTLPVLF AMLSNHYSFTWSHPQNWLVLILMMLAGAAIRQFFVLRHGYKLGRNRHPLPYALTGVAVIIGAIVWMNPVATGSMATGQSG AGADGAGSYAAVQKVLAQRCYQCHGEQVQMKNVRLDSPEQLSRHAQAVYQQVVVSKAMPMNNATGMTDAERELLRRWFEA GARTP
Specific function: Unknown
COG id: COG3748
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45026; Mature: 45026
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENYLLDWANLLLRWVHVITAIAWVGSSFYFVFLDSSLTPPEDEDLKRQGVSGELWAVHG CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHCCCCCCEEEEEC GGFYHPVKFAVKPPQLPAHLHWFYWESYSTWLSGFALFTISYLWNAGTYLIDKSLMNWST CCEECCEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC GAAVGVALSFLVVFWMLYDGICQLWGQRKNGDAVVGALVALLVVIASWLACHWFAGRAAF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLVGAMVATAMSANVFFWIIPGQRKVIASIKAGEPVDPVHGLRGKQRSVHNTYFTLPVLF HHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHH AMLSNHYSFTWSHPQNWLVLILMMLAGAAIRQFFVLRHGYKLGRNRHPLPYALTGVAVII HHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH GAIVWMNPVATGSMATGQSGAGADGAGSYAAVQKVLAQRCYQCHGEQVQMKNVRLDSPEQ HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHH LSRHAQAVYQQVVVSKAMPMNNATGMTDAERELLRRWFEAGARTP HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MENYLLDWANLLLRWVHVITAIAWVGSSFYFVFLDSSLTPPEDEDLKRQGVSGELWAVHG CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHCCCCCCEEEEEC GGFYHPVKFAVKPPQLPAHLHWFYWESYSTWLSGFALFTISYLWNAGTYLIDKSLMNWST CCEECCEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC GAAVGVALSFLVVFWMLYDGICQLWGQRKNGDAVVGALVALLVVIASWLACHWFAGRAAF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLVGAMVATAMSANVFFWIIPGQRKVIASIKAGEPVDPVHGLRGKQRSVHNTYFTLPVLF HHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHH AMLSNHYSFTWSHPQNWLVLILMMLAGAAIRQFFVLRHGYKLGRNRHPLPYALTGVAVII HHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH GAIVWMNPVATGSMATGQSGAGADGAGSYAAVQKVLAQRCYQCHGEQVQMKNVRLDSPEQ HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHH LSRHAQAVYQQVVVSKAMPMNNATGMTDAERELLRRWFEAGARTP HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA