Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787325

Identifier: 91787325

GI number: 91787325

Start: 1477103

End: 1478320

Strand: Direct

Name: 91787325

Synonym: Bpro_1430

Alternate gene names: NA

Gene position: 1477103-1478320 (Clockwise)

Preceding gene: 91787324

Following gene: 91787326

Centisome position: 28.4

GC content: 63.14

Gene sequence:

>1218_bases
ATGGAAAACTACCTTCTCGACTGGGCCAACCTGCTGCTGCGCTGGGTCCATGTCATCACCGCCATCGCCTGGGTCGGTTC
CTCGTTTTATTTTGTCTTTCTCGATTCCAGCCTGACGCCGCCGGAAGACGAAGACCTGAAGCGACAGGGTGTCAGCGGCG
AGCTCTGGGCGGTGCACGGCGGCGGGTTTTATCACCCGGTCAAGTTCGCGGTCAAACCGCCGCAGTTGCCGGCGCACCTG
CACTGGTTTTACTGGGAAAGCTACAGCACCTGGTTGTCGGGTTTTGCGCTCTTCACCATCTCCTACCTCTGGAACGCCGG
CACCTACCTGATCGACAAGTCCCTGATGAACTGGTCGACGGGTGCGGCTGTCGGTGTGGCGCTGTCTTTCCTGGTGGTGT
TCTGGATGCTGTATGACGGCATCTGCCAGCTGTGGGGCCAGCGCAAAAATGGCGATGCCGTGGTGGGGGCGCTGGTTGCG
CTGCTGGTGGTCATCGCGTCCTGGCTCGCCTGCCACTGGTTTGCCGGGCGCGCGGCTTTCCTGCTGGTGGGCGCCATGGT
GGCCACGGCCATGAGCGCCAATGTCTTTTTCTGGATCATCCCGGGCCAGCGCAAGGTGATTGCAAGCATCAAGGCCGGTG
AGCCGGTGGACCCGGTGCACGGCCTGCGCGGCAAGCAGCGCAGCGTGCACAACACCTACTTCACGCTGCCGGTGCTGTTT
GCCATGCTGAGCAACCACTACAGTTTTACCTGGAGTCATCCGCAGAACTGGCTGGTGCTCATCCTGATGATGCTGGCCGG
CGCCGCCATCCGCCAGTTCTTTGTGCTGCGCCATGGCTACAAGCTGGGCCGCAACCGCCACCCGCTGCCTTATGCGCTGA
CCGGGGTGGCGGTAATCATCGGCGCGATCGTCTGGATGAATCCGGTTGCCACTGGATCGATGGCGACTGGCCAAAGTGGT
GCGGGGGCTGACGGCGCCGGCAGTTATGCAGCGGTGCAGAAGGTGCTGGCCCAGCGCTGCTACCAGTGCCATGGCGAGCA
GGTGCAGATGAAAAACGTGCGGCTGGACTCGCCGGAGCAGCTCAGCCGGCATGCGCAAGCCGTGTACCAGCAGGTCGTGG
TGAGCAAGGCCATGCCCATGAACAATGCCACTGGCATGACCGACGCGGAGCGCGAGCTGCTCCGGCGGTGGTTTGAGGCG
GGTGCCCGGACGCCCTGA

Upstream 100 bases:

>100_bases
GGCCGCAGCGGAGCCGGGAAACGACTGTTTCTTTTGTTCGCGGCCTAATTTCTGCTTACAGCGCCCGCAGTGGTGAGCAG
GTTTGCATAGGTTGAGAGAT

Downstream 100 bases:

>100_bases
TCCGCTGATCGGCCACCACAACTGTCGCGCAGCAAGGCGCGGCGCATCTGCGTAATTTCACGTACCGGCATCGCCGGATC
CCGTGCTTCAATTCGTGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein; Cytochrome C Subfamily; Cytochrome C Region

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MENYLLDWANLLLRWVHVITAIAWVGSSFYFVFLDSSLTPPEDEDLKRQGVSGELWAVHGGGFYHPVKFAVKPPQLPAHL
HWFYWESYSTWLSGFALFTISYLWNAGTYLIDKSLMNWSTGAAVGVALSFLVVFWMLYDGICQLWGQRKNGDAVVGALVA
LLVVIASWLACHWFAGRAAFLLVGAMVATAMSANVFFWIIPGQRKVIASIKAGEPVDPVHGLRGKQRSVHNTYFTLPVLF
AMLSNHYSFTWSHPQNWLVLILMMLAGAAIRQFFVLRHGYKLGRNRHPLPYALTGVAVIIGAIVWMNPVATGSMATGQSG
AGADGAGSYAAVQKVLAQRCYQCHGEQVQMKNVRLDSPEQLSRHAQAVYQQVVVSKAMPMNNATGMTDAERELLRRWFEA
GARTP

Sequences:

>Translated_405_residues
MENYLLDWANLLLRWVHVITAIAWVGSSFYFVFLDSSLTPPEDEDLKRQGVSGELWAVHGGGFYHPVKFAVKPPQLPAHL
HWFYWESYSTWLSGFALFTISYLWNAGTYLIDKSLMNWSTGAAVGVALSFLVVFWMLYDGICQLWGQRKNGDAVVGALVA
LLVVIASWLACHWFAGRAAFLLVGAMVATAMSANVFFWIIPGQRKVIASIKAGEPVDPVHGLRGKQRSVHNTYFTLPVLF
AMLSNHYSFTWSHPQNWLVLILMMLAGAAIRQFFVLRHGYKLGRNRHPLPYALTGVAVIIGAIVWMNPVATGSMATGQSG
AGADGAGSYAAVQKVLAQRCYQCHGEQVQMKNVRLDSPEQLSRHAQAVYQQVVVSKAMPMNNATGMTDAERELLRRWFEA
GARTP
>Mature_405_residues
MENYLLDWANLLLRWVHVITAIAWVGSSFYFVFLDSSLTPPEDEDLKRQGVSGELWAVHGGGFYHPVKFAVKPPQLPAHL
HWFYWESYSTWLSGFALFTISYLWNAGTYLIDKSLMNWSTGAAVGVALSFLVVFWMLYDGICQLWGQRKNGDAVVGALVA
LLVVIASWLACHWFAGRAAFLLVGAMVATAMSANVFFWIIPGQRKVIASIKAGEPVDPVHGLRGKQRSVHNTYFTLPVLF
AMLSNHYSFTWSHPQNWLVLILMMLAGAAIRQFFVLRHGYKLGRNRHPLPYALTGVAVIIGAIVWMNPVATGSMATGQSG
AGADGAGSYAAVQKVLAQRCYQCHGEQVQMKNVRLDSPEQLSRHAQAVYQQVVVSKAMPMNNATGMTDAERELLRRWFEA
GARTP

Specific function: Unknown

COG id: COG3748

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45026; Mature: 45026

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENYLLDWANLLLRWVHVITAIAWVGSSFYFVFLDSSLTPPEDEDLKRQGVSGELWAVHG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHCCCCCCEEEEEC
GGFYHPVKFAVKPPQLPAHLHWFYWESYSTWLSGFALFTISYLWNAGTYLIDKSLMNWST
CCEECCEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
GAAVGVALSFLVVFWMLYDGICQLWGQRKNGDAVVGALVALLVVIASWLACHWFAGRAAF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLVGAMVATAMSANVFFWIIPGQRKVIASIKAGEPVDPVHGLRGKQRSVHNTYFTLPVLF
HHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHH
AMLSNHYSFTWSHPQNWLVLILMMLAGAAIRQFFVLRHGYKLGRNRHPLPYALTGVAVII
HHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
GAIVWMNPVATGSMATGQSGAGADGAGSYAAVQKVLAQRCYQCHGEQVQMKNVRLDSPEQ
HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHH
LSRHAQAVYQQVVVSKAMPMNNATGMTDAERELLRRWFEAGARTP
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MENYLLDWANLLLRWVHVITAIAWVGSSFYFVFLDSSLTPPEDEDLKRQGVSGELWAVHG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHCCCCCCEEEEEC
GGFYHPVKFAVKPPQLPAHLHWFYWESYSTWLSGFALFTISYLWNAGTYLIDKSLMNWST
CCEECCEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
GAAVGVALSFLVVFWMLYDGICQLWGQRKNGDAVVGALVALLVVIASWLACHWFAGRAAF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLVGAMVATAMSANVFFWIIPGQRKVIASIKAGEPVDPVHGLRGKQRSVHNTYFTLPVLF
HHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHH
AMLSNHYSFTWSHPQNWLVLILMMLAGAAIRQFFVLRHGYKLGRNRHPLPYALTGVAVII
HHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
GAIVWMNPVATGSMATGQSGAGADGAGSYAAVQKVLAQRCYQCHGEQVQMKNVRLDSPEQ
HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHH
LSRHAQAVYQQVVVSKAMPMNNATGMTDAERELLRRWFEAGARTP
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA