Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is xcpX [H]

Identifier: 91787221

GI number: 91787221

Start: 1363537

End: 1364481

Strand: Direct

Name: xcpX [H]

Synonym: Bpro_1325

Alternate gene names: 91787221

Gene position: 1363537-1364481 (Clockwise)

Preceding gene: 91787220

Following gene: 91787222

Centisome position: 26.22

GC content: 65.71

Gene sequence:

>945_bases
ATGGCTCTCGAGTCGGGTGCGGCGCTCCTGAGTGCCATGCTCACCGTGACACTGGTGGCTACCTTTGCCGCGGCGGCGCT
CTGGCAGCAGTGGCGCAGTGTGGAAGTGGAGGCGGCTGAGCGTGCCCGGGTGCAGTCGGCATGGATTCTGACGGGCGCCC
TGGACTGGACGCGCCTGATCCTGCGTGAGGATGCCCGTGCGGGCGGAGCGGACCACCTGGCTGAGCCGTGGGCCGTGCCC
TTGAATGAGGCGCGGCTGTCGAGCTTTCTGGCCATTGACAAGAATGCCAGCGAGACCGAGCGCGAAGCGTTTCTTTCCGG
CCAGGTGAGCGACTTGCAGGGCAGGCTCAACGTGATCAACCTGGTTGCAGGCAACGCGATTTCGGAACCCGCCATGGTCA
GCTTTGGCCGGCTGTTCGAGTTGCTGGGTTTGCCAGTCCAGCAGTTGAATACTCTGGCCAGCCAACTGCTGCAGGCCTCG
CAAGCCGGCGCTCAGGCGCCTACCCAGCTGACGCCCCTGATGCCCCAGCGGGTCGAGCAACTGGTCTGGCTGGGGCTTGC
CCCGGAGACGCTTGCCGCGCTGGAACCCTACATCACGCTGCTGCCCGTGCGTACCCCTGTCAACCTCAATACCGCCAGCG
CCGAAGTTATTTATGCCAGTACAGCCGGGCTGGAGATGGCTGAAGCGCAAAAGCTGGTGGCCGCGCGTGCGCGCAGCCAC
TTTCGAACGCTGGCCGATGCCAATCAGCAACACAGTGGCCCAAGCGGGGCGTTCAATGACGGCCAGCACGCGGTGGCCTC
CCGGTTTTTTGAAGTACGCGGCAGATTGCGGCTCGACCAGACGGAGGTCCAGGAGCGTTCAGTGCTGCAGCGCGACGGCC
TGACGGTGCGCACGCTCCGGCGCGACCGGGGCGTTGTCACGGTGACAGACGTGGCCCGCCGCTGA

Upstream 100 bases:

>100_bases
AGCTCCCTGCCCCCCGAGGGGGCTGCTGCGCCTGCGGTCTGGCAAAGCCAGTCCCGCGGCTCCTGCTGGGGTGGAGAGTC
CCCACGCTCGCTCGCTGCGT

Downstream 100 bases:

>100_bases
GACGCAGAGAAGAATTGCATCCATTGCATCCGGCCGCGGTCGGGGTACGTTGAGGGTACGTTGGGGTATTCATAGTCAAA
ACGCTACCCTACAATGAAAT

Product: general secretion pathway protein K

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MALESGAALLSAMLTVTLVATFAAAALWQQWRSVEVEAAERARVQSAWILTGALDWTRLILREDARAGGADHLAEPWAVP
LNEARLSSFLAIDKNASETEREAFLSGQVSDLQGRLNVINLVAGNAISEPAMVSFGRLFELLGLPVQQLNTLASQLLQAS
QAGAQAPTQLTPLMPQRVEQLVWLGLAPETLAALEPYITLLPVRTPVNLNTASAEVIYASTAGLEMAEAQKLVAARARSH
FRTLADANQQHSGPSGAFNDGQHAVASRFFEVRGRLRLDQTEVQERSVLQRDGLTVRTLRRDRGVVTVTDVARR

Sequences:

>Translated_314_residues
MALESGAALLSAMLTVTLVATFAAAALWQQWRSVEVEAAERARVQSAWILTGALDWTRLILREDARAGGADHLAEPWAVP
LNEARLSSFLAIDKNASETEREAFLSGQVSDLQGRLNVINLVAGNAISEPAMVSFGRLFELLGLPVQQLNTLASQLLQAS
QAGAQAPTQLTPLMPQRVEQLVWLGLAPETLAALEPYITLLPVRTPVNLNTASAEVIYASTAGLEMAEAQKLVAARARSH
FRTLADANQQHSGPSGAFNDGQHAVASRFFEVRGRLRLDQTEVQERSVLQRDGLTVRTLRRDRGVVTVTDVARR
>Mature_313_residues
ALESGAALLSAMLTVTLVATFAAAALWQQWRSVEVEAAERARVQSAWILTGALDWTRLILREDARAGGADHLAEPWAVPL
NEARLSSFLAIDKNASETEREAFLSGQVSDLQGRLNVINLVAGNAISEPAMVSFGRLFELLGLPVQQLNTLASQLLQASQ
AGAQAPTQLTPLMPQRVEQLVWLGLAPETLAALEPYITLLPVRTPVNLNTASAEVIYASTAGLEMAEAQKLVAARARSHF
RTLADANQQHSGPSGAFNDGQHAVASRFFEVRGRLRLDQTEVQERSVLQRDGLTVRTLRRDRGVVTVTDVARR

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG3156

COG function: function code U; Type II secretory pathway, component PulK

Gene ontology:

Cell location: Cell inner membrane (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP K family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005628 [H]

Pfam domain/function: PF03934 GspK [H]

EC number: NA

Molecular weight: Translated: 34061; Mature: 33930

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALESGAALLSAMLTVTLVATFAAAALWQQWRSVEVEAAERARVQSAWILTGALDWTRLI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEECHHHHHHHH
LREDARAGGADHLAEPWAVPLNEARLSSFLAIDKNASETEREAFLSGQVSDLQGRLNVIN
HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCHHHHHHHHCCCHHHHHCCHHEEE
LVAGNAISEPAMVSFGRLFELLGLPVQQLNTLASQLLQASQAGAQAPTQLTPLMPQRVEQ
EEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
LVWLGLAPETLAALEPYITLLPVRTPVNLNTASAEVIYASTAGLEMAEAQKLVAARARSH
HHHHCCCHHHHHHHCCHHEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
FRTLADANQQHSGPSGAFNDGQHAVASRFFEVRGRLRLDQTEVQERSVLQRDGLTVRTLR
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEHH
RDRGVVTVTDVARR
HCCCCEEECCHHCC
>Mature Secondary Structure 
ALESGAALLSAMLTVTLVATFAAAALWQQWRSVEVEAAERARVQSAWILTGALDWTRLI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEECHHHHHHHH
LREDARAGGADHLAEPWAVPLNEARLSSFLAIDKNASETEREAFLSGQVSDLQGRLNVIN
HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCHHHHHHHHCCCHHHHHCCHHEEE
LVAGNAISEPAMVSFGRLFELLGLPVQQLNTLASQLLQASQAGAQAPTQLTPLMPQRVEQ
EEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
LVWLGLAPETLAALEPYITLLPVRTPVNLNTASAEVIYASTAGLEMAEAQKLVAARARSH
HHHHCCCHHHHHHHCCHHEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
FRTLADANQQHSGPSGAFNDGQHAVASRFFEVRGRLRLDQTEVQERSVLQRDGLTVRTLR
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEHH
RDRGVVTVTDVARR
HCCCCEEECCHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1588814; 10984043 [H]