Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is xcpX [H]
Identifier: 91787221
GI number: 91787221
Start: 1363537
End: 1364481
Strand: Direct
Name: xcpX [H]
Synonym: Bpro_1325
Alternate gene names: 91787221
Gene position: 1363537-1364481 (Clockwise)
Preceding gene: 91787220
Following gene: 91787222
Centisome position: 26.22
GC content: 65.71
Gene sequence:
>945_bases ATGGCTCTCGAGTCGGGTGCGGCGCTCCTGAGTGCCATGCTCACCGTGACACTGGTGGCTACCTTTGCCGCGGCGGCGCT CTGGCAGCAGTGGCGCAGTGTGGAAGTGGAGGCGGCTGAGCGTGCCCGGGTGCAGTCGGCATGGATTCTGACGGGCGCCC TGGACTGGACGCGCCTGATCCTGCGTGAGGATGCCCGTGCGGGCGGAGCGGACCACCTGGCTGAGCCGTGGGCCGTGCCC TTGAATGAGGCGCGGCTGTCGAGCTTTCTGGCCATTGACAAGAATGCCAGCGAGACCGAGCGCGAAGCGTTTCTTTCCGG CCAGGTGAGCGACTTGCAGGGCAGGCTCAACGTGATCAACCTGGTTGCAGGCAACGCGATTTCGGAACCCGCCATGGTCA GCTTTGGCCGGCTGTTCGAGTTGCTGGGTTTGCCAGTCCAGCAGTTGAATACTCTGGCCAGCCAACTGCTGCAGGCCTCG CAAGCCGGCGCTCAGGCGCCTACCCAGCTGACGCCCCTGATGCCCCAGCGGGTCGAGCAACTGGTCTGGCTGGGGCTTGC CCCGGAGACGCTTGCCGCGCTGGAACCCTACATCACGCTGCTGCCCGTGCGTACCCCTGTCAACCTCAATACCGCCAGCG CCGAAGTTATTTATGCCAGTACAGCCGGGCTGGAGATGGCTGAAGCGCAAAAGCTGGTGGCCGCGCGTGCGCGCAGCCAC TTTCGAACGCTGGCCGATGCCAATCAGCAACACAGTGGCCCAAGCGGGGCGTTCAATGACGGCCAGCACGCGGTGGCCTC CCGGTTTTTTGAAGTACGCGGCAGATTGCGGCTCGACCAGACGGAGGTCCAGGAGCGTTCAGTGCTGCAGCGCGACGGCC TGACGGTGCGCACGCTCCGGCGCGACCGGGGCGTTGTCACGGTGACAGACGTGGCCCGCCGCTGA
Upstream 100 bases:
>100_bases AGCTCCCTGCCCCCCGAGGGGGCTGCTGCGCCTGCGGTCTGGCAAAGCCAGTCCCGCGGCTCCTGCTGGGGTGGAGAGTC CCCACGCTCGCTCGCTGCGT
Downstream 100 bases:
>100_bases GACGCAGAGAAGAATTGCATCCATTGCATCCGGCCGCGGTCGGGGTACGTTGAGGGTACGTTGGGGTATTCATAGTCAAA ACGCTACCCTACAATGAAAT
Product: general secretion pathway protein K
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MALESGAALLSAMLTVTLVATFAAAALWQQWRSVEVEAAERARVQSAWILTGALDWTRLILREDARAGGADHLAEPWAVP LNEARLSSFLAIDKNASETEREAFLSGQVSDLQGRLNVINLVAGNAISEPAMVSFGRLFELLGLPVQQLNTLASQLLQAS QAGAQAPTQLTPLMPQRVEQLVWLGLAPETLAALEPYITLLPVRTPVNLNTASAEVIYASTAGLEMAEAQKLVAARARSH FRTLADANQQHSGPSGAFNDGQHAVASRFFEVRGRLRLDQTEVQERSVLQRDGLTVRTLRRDRGVVTVTDVARR
Sequences:
>Translated_314_residues MALESGAALLSAMLTVTLVATFAAAALWQQWRSVEVEAAERARVQSAWILTGALDWTRLILREDARAGGADHLAEPWAVP LNEARLSSFLAIDKNASETEREAFLSGQVSDLQGRLNVINLVAGNAISEPAMVSFGRLFELLGLPVQQLNTLASQLLQAS QAGAQAPTQLTPLMPQRVEQLVWLGLAPETLAALEPYITLLPVRTPVNLNTASAEVIYASTAGLEMAEAQKLVAARARSH FRTLADANQQHSGPSGAFNDGQHAVASRFFEVRGRLRLDQTEVQERSVLQRDGLTVRTLRRDRGVVTVTDVARR >Mature_313_residues ALESGAALLSAMLTVTLVATFAAAALWQQWRSVEVEAAERARVQSAWILTGALDWTRLILREDARAGGADHLAEPWAVPL NEARLSSFLAIDKNASETEREAFLSGQVSDLQGRLNVINLVAGNAISEPAMVSFGRLFELLGLPVQQLNTLASQLLQASQ AGAQAPTQLTPLMPQRVEQLVWLGLAPETLAALEPYITLLPVRTPVNLNTASAEVIYASTAGLEMAEAQKLVAARARSHF RTLADANQQHSGPSGAFNDGQHAVASRFFEVRGRLRLDQTEVQERSVLQRDGLTVRTLRRDRGVVTVTDVARR
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG3156
COG function: function code U; Type II secretory pathway, component PulK
Gene ontology:
Cell location: Cell inner membrane (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP K family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005628 [H]
Pfam domain/function: PF03934 GspK [H]
EC number: NA
Molecular weight: Translated: 34061; Mature: 33930
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALESGAALLSAMLTVTLVATFAAAALWQQWRSVEVEAAERARVQSAWILTGALDWTRLI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEECHHHHHHHH LREDARAGGADHLAEPWAVPLNEARLSSFLAIDKNASETEREAFLSGQVSDLQGRLNVIN HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCHHHHHHHHCCCHHHHHCCHHEEE LVAGNAISEPAMVSFGRLFELLGLPVQQLNTLASQLLQASQAGAQAPTQLTPLMPQRVEQ EEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH LVWLGLAPETLAALEPYITLLPVRTPVNLNTASAEVIYASTAGLEMAEAQKLVAARARSH HHHHCCCHHHHHHHCCHHEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH FRTLADANQQHSGPSGAFNDGQHAVASRFFEVRGRLRLDQTEVQERSVLQRDGLTVRTLR HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEHH RDRGVVTVTDVARR HCCCCEEECCHHCC >Mature Secondary Structure ALESGAALLSAMLTVTLVATFAAAALWQQWRSVEVEAAERARVQSAWILTGALDWTRLI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEECHHHHHHHH LREDARAGGADHLAEPWAVPLNEARLSSFLAIDKNASETEREAFLSGQVSDLQGRLNVIN HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCHHHHHHHHCCCHHHHHCCHHEEE LVAGNAISEPAMVSFGRLFELLGLPVQQLNTLASQLLQASQAGAQAPTQLTPLMPQRVEQ EEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH LVWLGLAPETLAALEPYITLLPVRTPVNLNTASAEVIYASTAGLEMAEAQKLVAARARSH HHHHCCCHHHHHHHCCHHEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH FRTLADANQQHSGPSGAFNDGQHAVASRFFEVRGRLRLDQTEVQERSVLQRDGLTVRTLR HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEHH RDRGVVTVTDVARR HCCCCEEECCHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1588814; 10984043 [H]