Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91787222
Identifier: 91787222
GI number: 91787222
Start: 1364600
End: 1365823
Strand: Direct
Name: 91787222
Synonym: Bpro_1326
Alternate gene names: NA
Gene position: 1364600-1365823 (Clockwise)
Preceding gene: 91787221
Following gene: 91787223
Centisome position: 26.24
GC content: 68.22
Gene sequence:
>1224_bases ATGAGCACACTGATCGTTTATCTCCCCTTGGCGGCACCCGGTGCTGCGGCAAGCTATGACTACGTACGCACGCACGACGG TCGAACGATGACGGACCACGCCAGTGTGCCGTTGGCCCTGCTGCCGGGCGCCGAGCGCGGCGGCGAGGTGATCGCCGTCG TGCCCGTGGGGTTGCTGTCGTGGCATCTGGTCGAGTTGCCCAAGGGCGTTGGCATGGGCTCACCGCGGCTGCGCTCCATC CTGGAAGGCCTGCTCGAAGACCGGCTGCTGGATGAGCCGGAGCAACTGCATCTGGCCCTGGCGCCGGGTGCCGTTGCCGG TGGACAGGCCTGGGTCGCTGTTTGTGACAAGCACTGGCTGCGTGGGCACCTGCAGGCGCTGGAACTCGCGCAACGTCCGG TCACCCGCATCGTGCCGGAGTTTGCCCCGGCGCCTGGCCCTCTGTACCTGCACGCTGTGGGTGAGGCCGACCTGCCGCAG CTGCTGGTTACCGGCGATGTTGCAGCGGGCGTGATGCTACTTCCCCTGAACGCCGCAGCGATGACCCTGATCCCGGTCAC CAGTGAATCCGATGAAGAGCTTCAGGCCCTGGCTGAACCCGGCGTGGCCGCACTGGCCGAGCAGGTGCTTCAGCGCAAGG TCGGCGTGATGACCCGGCCCCAGCGCTGGCTGGAGGCCGCCCGTTCGCCCTGGGACCTGGCGCAGTTTGAGCTCGCCTCC TCGAGCCGCGCGCGCACGGTCAAACGCCTGTCCAGCGTGGGCCGCGAGCTGTGGCAATCGCCCGCCTGGCGACCGGCGCG GTGGGGCGCTGCGCTGCTGCTGCTGGCCAATCTGATCGGTTTGAATGCCTGGGCCTGGAAAGAGCAATCGGCGCTGCAGG CCCGGCGTGCGGCGGTCAAGGACACCCTGATGCAGACCTTTCCGAACGTCAAGGTGGTGGTGGATGCGCCGCTTCAAATG GAGCGTGAGGTGGCGGCATTGCGGCAGGCCACCGGAGCCGCCTCGGGGCGCGATCTGGAGGCCATTCTGGCGGCGCTGGG CGCAACCATGGCTCACGGCCGGACCGCGGGCGCCATTGAATTCGTGGCTGGCGAGGCCCGCATCAAGGGCCTGCAACTCG GTCCCGAGGAAGCGTCCACCCTGTCCGTCCAGCTCAAGGGCCAGGGCTACAGCGCGCGGGCGGAAGGCGACACCATGTTC ATCAAGCAGGAGCTGGCCCCATGA
Upstream 100 bases:
>100_bases ATCCATTGCATCCGGCCGCGGTCGGGGTACGTTGAGGGTACGTTGGGGTATTCATAGTCAAAACGCTACCCTACAATGAA ATGAACCGGGGTCTTTGCCC
Downstream 100 bases:
>100_bases AAATCGCCGATGCCCTGGCCCCTCTTCAGGCGCGCTGGCATGCACTTGGCCAACGCGAGCAAACCTTGCTCCGCAGCGTT GCGTTGCTGGTGGGGCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: General Secretion Pathway Protein L
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MSTLIVYLPLAAPGAAASYDYVRTHDGRTMTDHASVPLALLPGAERGGEVIAVVPVGLLSWHLVELPKGVGMGSPRLRSI LEGLLEDRLLDEPEQLHLALAPGAVAGGQAWVAVCDKHWLRGHLQALELAQRPVTRIVPEFAPAPGPLYLHAVGEADLPQ LLVTGDVAAGVMLLPLNAAAMTLIPVTSESDEELQALAEPGVAALAEQVLQRKVGVMTRPQRWLEAARSPWDLAQFELAS SSRARTVKRLSSVGRELWQSPAWRPARWGAALLLLANLIGLNAWAWKEQSALQARRAAVKDTLMQTFPNVKVVVDAPLQM EREVAALRQATGAASGRDLEAILAALGATMAHGRTAGAIEFVAGEARIKGLQLGPEEASTLSVQLKGQGYSARAEGDTMF IKQELAP
Sequences:
>Translated_407_residues MSTLIVYLPLAAPGAAASYDYVRTHDGRTMTDHASVPLALLPGAERGGEVIAVVPVGLLSWHLVELPKGVGMGSPRLRSI LEGLLEDRLLDEPEQLHLALAPGAVAGGQAWVAVCDKHWLRGHLQALELAQRPVTRIVPEFAPAPGPLYLHAVGEADLPQ LLVTGDVAAGVMLLPLNAAAMTLIPVTSESDEELQALAEPGVAALAEQVLQRKVGVMTRPQRWLEAARSPWDLAQFELAS SSRARTVKRLSSVGRELWQSPAWRPARWGAALLLLANLIGLNAWAWKEQSALQARRAAVKDTLMQTFPNVKVVVDAPLQM EREVAALRQATGAASGRDLEAILAALGATMAHGRTAGAIEFVAGEARIKGLQLGPEEASTLSVQLKGQGYSARAEGDTMF IKQELAP >Mature_406_residues STLIVYLPLAAPGAAASYDYVRTHDGRTMTDHASVPLALLPGAERGGEVIAVVPVGLLSWHLVELPKGVGMGSPRLRSIL EGLLEDRLLDEPEQLHLALAPGAVAGGQAWVAVCDKHWLRGHLQALELAQRPVTRIVPEFAPAPGPLYLHAVGEADLPQL LVTGDVAAGVMLLPLNAAAMTLIPVTSESDEELQALAEPGVAALAEQVLQRKVGVMTRPQRWLEAARSPWDLAQFELASS SRARTVKRLSSVGRELWQSPAWRPARWGAALLLLANLIGLNAWAWKEQSALQARRAAVKDTLMQTFPNVKVVVDAPLQME REVAALRQATGAASGRDLEAILAALGATMAHGRTAGAIEFVAGEARIKGLQLGPEEASTLSVQLKGQGYSARAEGDTMFI KQELAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43385; Mature: 43253
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLIVYLPLAAPGAAASYDYVRTHDGRTMTDHASVPLALLPGAERGGEVIAVVPVGLLS CCEEEEEEECCCCCCCCCCCCEEECCCCEECCCCCCCEEEECCCCCCCCEEEEECHHHHH WHLVELPKGVGMGSPRLRSILEGLLEDRLLDEPEQLHLALAPGAVAGGQAWVAVCDKHWL HHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHH RGHLQALELAQRPVTRIVPEFAPAPGPLYLHAVGEADLPQLLVTGDVAAGVMLLPLNAAA HHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEECCCCCCCCEEEECCHHHCEEEEECCCCE MTLIPVTSESDEELQALAEPGVAALAEQVLQRKVGVMTRPQRWLEAARSPWDLAQFELAS EEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHC SSRARTVKRLSSVGRELWQSPAWRPARWGAALLLLANLIGLNAWAWKEQSALQARRAAVK CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH DTLMQTFPNVKVVVDAPLQMEREVAALRQATGAASGRDLEAILAALGATMAHGRTAGAIE HHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEE FVAGEARIKGLQLGPEEASTLSVQLKGQGYSARAEGDTMFIKQELAP EEECCHHEECEECCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCC >Mature Secondary Structure STLIVYLPLAAPGAAASYDYVRTHDGRTMTDHASVPLALLPGAERGGEVIAVVPVGLLS CEEEEEEECCCCCCCCCCCCEEECCCCEECCCCCCCEEEECCCCCCCCEEEEECHHHHH WHLVELPKGVGMGSPRLRSILEGLLEDRLLDEPEQLHLALAPGAVAGGQAWVAVCDKHWL HHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHH RGHLQALELAQRPVTRIVPEFAPAPGPLYLHAVGEADLPQLLVTGDVAAGVMLLPLNAAA HHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEECCCCCCCCEEEECCHHHCEEEEECCCCE MTLIPVTSESDEELQALAEPGVAALAEQVLQRKVGVMTRPQRWLEAARSPWDLAQFELAS EEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHC SSRARTVKRLSSVGRELWQSPAWRPARWGAALLLLANLIGLNAWAWKEQSALQARRAAVK CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH DTLMQTFPNVKVVVDAPLQMEREVAALRQATGAASGRDLEAILAALGATMAHGRTAGAIE HHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEE FVAGEARIKGLQLGPEEASTLSVQLKGQGYSARAEGDTMFIKQELAP EEECCHHEECEECCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA