Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is xcpT [H]
Identifier: 91787217
GI number: 91787217
Start: 1361127
End: 1361603
Strand: Direct
Name: xcpT [H]
Synonym: Bpro_1321
Alternate gene names: 91787217
Gene position: 1361127-1361603 (Clockwise)
Preceding gene: 91787202
Following gene: 91787218
Centisome position: 26.17
GC content: 60.17
Gene sequence:
>477_bases ATGATGGAAGCACACTGGTCTACCGACATCCCAACCATGACCTCTCTCAAGTTTTTCGCGCGCCGTAGCCAGCAGGCTGG TTTCACCCTGATTGAGCTGATGGTCGTTCTGGTCATCATTGGTGTGCTGGCGGCGCTGATTGTTCCCAATGTGCTGGACC GTGCCGATGATGCGCGTGTCATGGCGGCCAGAACCGATGTGAACAACCTGAGCCAGGCGCTCAGGCTCTACAAGCTGGAC AACCAGCGCATGCCTACCGCCGAGCAGAGCCTGCAGGCGCTGATCGTCAAGCCCACGAGCGGGCCGATTCCGGCCAACTG GAAACCCTACGTGGAAAAGCTGCCCAACGATCCCTGGGGCCGTCCTTACCAGTACCTCAACCCCGGCATCAAAGGGGAAG TCGACGTCATGTCTCTGGGGGCCGACGGCCAGGCCGGCGGTGAAGGCAAAGATGCTGACATCGGCAGCTGGCAATAG
Upstream 100 bases:
>100_bases GTCCCCAGTACACCAGGCTCGCAGCAGCGAGTGCCCAGACTACCAGCGTAATGGCCCGCAAGCCCAGCCTGCTTTGTGAA AGTATTACCACACAGAGATT
Downstream 100 bases:
>100_bases CGATATTGCCTCCATTCCCGTCCCTGCACGTGCTGCCCCGGGAGCCCGTGCCCGCAATCTCCGCAACCGGGGATTTACCT TGCTCGAACTCCTCGTGGTG
Product: general secretion pathway protein G
Products: NA
Alternate protein names: PilD-dependent protein pddA [H]
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MMEAHWSTDIPTMTSLKFFARRSQQAGFTLIELMVVLVIIGVLAALIVPNVLDRADDARVMAARTDVNNLSQALRLYKLD NQRMPTAEQSLQALIVKPTSGPIPANWKPYVEKLPNDPWGRPYQYLNPGIKGEVDVMSLGADGQAGGEGKDADIGSWQ
Sequences:
>Translated_158_residues MMEAHWSTDIPTMTSLKFFARRSQQAGFTLIELMVVLVIIGVLAALIVPNVLDRADDARVMAARTDVNNLSQALRLYKLD NQRMPTAEQSLQALIVKPTSGPIPANWKPYVEKLPNDPWGRPYQYLNPGIKGEVDVMSLGADGQAGGEGKDADIGSWQ >Mature_158_residues MMEAHWSTDIPTMTSLKFFARRSQQAGFTLIELMVVLVIIGVLAALIVPNVLDRADDARVMAARTDVNNLSQALRLYKLD NQRMPTAEQSLQALIVKPTSGPIPANWKPYVEKLPNDPWGRPYQYLNPGIKGEVDVMSLGADGQAGGEGKDADIGSWQ
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of a variety of enzymes across the outer membrane [H]
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP G family [H]
Homologues:
Organism=Escherichia coli, GI1789725, Length=136, Percent_Identity=46.3235294117647, Blast_Score=104, Evalue=3e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000983 - InterPro: IPR012902 - InterPro: IPR001120 - InterPro: IPR013545 - InterPro: IPR010054 [H]
Pfam domain/function: PF08334 GSPII_G; PF07963 N_methyl [H]
EC number: NA
Molecular weight: Translated: 17365; Mature: 17365
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMEAHWSTDIPTMTSLKFFARRSQQAGFTLIELMVVLVIIGVLAALIVPNVLDRADDARV CCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE MAARTDVNNLSQALRLYKLDNQRMPTAEQSLQALIVKPTSGPIPANWKPYVEKLPNDPWG EHHHCCHHHHHHHHHHHHCCCCCCCCHHHHCEEEEECCCCCCCCCCCCHHHHHCCCCCCC RPYQYLNPGIKGEVDVMSLGADGQAGGEGKDADIGSWQ CCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MMEAHWSTDIPTMTSLKFFARRSQQAGFTLIELMVVLVIIGVLAALIVPNVLDRADDARV CCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE MAARTDVNNLSQALRLYKLDNQRMPTAEQSLQALIVKPTSGPIPANWKPYVEKLPNDPWG EHHHCCHHHHHHHHHHHHCCCCCCCCHHHHCEEEEECCCCCCCCCCCCHHHHHCCCCCCC RPYQYLNPGIKGEVDVMSLGADGQAGGEGKDADIGSWQ CCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1588814; 1309616; 10984043 [H]