Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91787202
Identifier: 91787202
GI number: 91787202
Start: 1349596
End: 1350135
Strand: Direct
Name: 91787202
Synonym: Bpro_1306
Alternate gene names: NA
Gene position: 1349596-1350135 (Clockwise)
Preceding gene: 91787200
Following gene: 91787217
Centisome position: 25.95
GC content: 48.15
Gene sequence:
>540_bases GTGGCGTTTCCCGGGGTAATTGGTTCGGGCTCTTCGGCTGACCGGGTTGGCCAGCAGAAGGTTCTTGAGCCTAAAGCTGA TGTCGGGTTGCAAGGGAATGTCAATGCCACTTCGGATAAGAAAAAAGAGGCGCAACCAGAATTCAAAGCAACTGCTGAAG TGGCGAGCAAACCACATACAGAAGCAGAGTTTTATCAAGGCCTTGCAACTAGAGTTTTCCTGTCCATAACCTTTGGCATC TTCGCAGCATACGCCGGACGACAAGCAAGTCGGTTTTTTGAGATGGAGCAAAAGAATAGAAAGTTGGCGCTTGAACTTGA AGCACTTGGCCCATTTATAGAGCCTTTAGATAAGTCGGATAGGGATAAGTTTAGAGTGCAAATTGGAGACCGCTCCTTTG GGGTGCCGGATCATGACGCGTCCAAGCCCAAAGAAGATGATCCGGTAACACTTGCTGGGTGGATCAAATCCAAAGATGGA ATAGAGGCCATCACCAATCCGATAAAGGAGGTCTTGAAAGCTCTGAAGATAGGTAACTGA
Upstream 100 bases:
>100_bases TCATTTAACAAAAATTCACGGAGGAACTGTATGAGCCACTGGATCGATAGAGTCCGTCACACTCCTTGCTCTAGCTGGTT TGATTTTTGTCGCCTTTTTG
Downstream 100 bases:
>100_bases ACCGTTCGGTGCAGCACCAGCGATGACGTTACAACAAATTGCGCCTGTGATGCGCTGCGAGACGAGCCAGGTAGCCGTCA TGGGCCTTGCGCCTTGCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MAFPGVIGSGSSADRVGQQKVLEPKADVGLQGNVNATSDKKKEAQPEFKATAEVASKPHTEAEFYQGLATRVFLSITFGI FAAYAGRQASRFFEMEQKNRKLALELEALGPFIEPLDKSDRDKFRVQIGDRSFGVPDHDASKPKEDDPVTLAGWIKSKDG IEAITNPIKEVLKALKIGN
Sequences:
>Translated_179_residues MAFPGVIGSGSSADRVGQQKVLEPKADVGLQGNVNATSDKKKEAQPEFKATAEVASKPHTEAEFYQGLATRVFLSITFGI FAAYAGRQASRFFEMEQKNRKLALELEALGPFIEPLDKSDRDKFRVQIGDRSFGVPDHDASKPKEDDPVTLAGWIKSKDG IEAITNPIKEVLKALKIGN >Mature_178_residues AFPGVIGSGSSADRVGQQKVLEPKADVGLQGNVNATSDKKKEAQPEFKATAEVASKPHTEAEFYQGLATRVFLSITFGIF AAYAGRQASRFFEMEQKNRKLALELEALGPFIEPLDKSDRDKFRVQIGDRSFGVPDHDASKPKEDDPVTLAGWIKSKDGI EAITNPIKEVLKALKIGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19521; Mature: 19390
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFPGVIGSGSSADRVGQQKVLEPKADVGLQGNVNATSDKKKEAQPEFKATAEVASKPHT CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCH EAEFYQGLATRVFLSITFGIFAAYAGRQASRFFEMEQKNRKLALELEALGPFIEPLDKSD HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEEEHHHHCCHHHHCCCCC RDKFRVQIGDRSFGVPDHDASKPKEDDPVTLAGWIKSKDGIEAITNPIKEVLKALKIGN CCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AFPGVIGSGSSADRVGQQKVLEPKADVGLQGNVNATSDKKKEAQPEFKATAEVASKPHT CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCH EAEFYQGLATRVFLSITFGIFAAYAGRQASRFFEMEQKNRKLALELEALGPFIEPLDKSD HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEEEHHHHCCHHHHCCCCC RDKFRVQIGDRSFGVPDHDASKPKEDDPVTLAGWIKSKDGIEAITNPIKEVLKALKIGN CCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA