Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91787200
Identifier: 91787200
GI number: 91787200
Start: 1348487
End: 1348816
Strand: Direct
Name: 91787200
Synonym: Bpro_1304
Alternate gene names: NA
Gene position: 1348487-1348816 (Clockwise)
Preceding gene: 91787199
Following gene: 91787202
Centisome position: 25.93
GC content: 55.76
Gene sequence:
>330_bases GTGTCTGTAAGGTGTCTATTGATCTATGGTCATGCGTGGACACAGGAAACCAGATACCATAGATTCCCCCTAGGATCACA CGCACTGGAGGAAGCCATGACTAGCGTCAGATGGGAGACCGTCACCGACGACGGTACCGCAGAGTTTCAGGTCCAATACG GTGGGAAGACAGCGAAGATCAAGCTTGAAGGACTGGACACGACGGGATGGCAGGAAGAACCCGCTCCACCGTGGACGGAG TTCTACCTGAAGTGCTTCAAGGAGCTGTTCGACGCGATCCAAGCCAAGGACACACACTGGACGGATCGCCACCCCGGCGG TAAAGGGTGA
Upstream 100 bases:
>100_bases AGTCCAACACGCCCTACCACCCAGAAGTCTTATAAACAAAGGAAAGCCTGCTATTCAATAGATAGCAGGCTTCTTTTTTT CGACTGTCCTGGGTGCACTG
Downstream 100 bases:
>100_bases CCCCGGTCACCAGCGCGGCGTCAACGTTGGCTGCCAGCCTTGCACCCCGGCGTCGGGGAATAGCGCCAGCACTGCCTCAC GTCGGCGCTCCAACTCATCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MSVRCLLIYGHAWTQETRYHRFPLGSHALEEAMTSVRWETVTDDGTAEFQVQYGGKTAKIKLEGLDTTGWQEEPAPPWTE FYLKCFKELFDAIQAKDTHWTDRHPGGKG
Sequences:
>Translated_109_residues MSVRCLLIYGHAWTQETRYHRFPLGSHALEEAMTSVRWETVTDDGTAEFQVQYGGKTAKIKLEGLDTTGWQEEPAPPWTE FYLKCFKELFDAIQAKDTHWTDRHPGGKG >Mature_108_residues SVRCLLIYGHAWTQETRYHRFPLGSHALEEAMTSVRWETVTDDGTAEFQVQYGGKTAKIKLEGLDTTGWQEEPAPPWTEF YLKCFKELFDAIQAKDTHWTDRHPGGKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12533; Mature: 12402
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVRCLLIYGHAWTQETRYHRFPLGSHALEEAMTSVRWETVTDDGTAEFQVQYGGKTAKI CCEEEEEEECCCCCCCCCEEECCCCHHHHHHHHHHCCCEEECCCCCEEEEEEECCEEEEE KLEGLDTTGWQEEPAPPWTEFYLKCFKELFDAIQAKDTHWTDRHPGGKG EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SVRCLLIYGHAWTQETRYHRFPLGSHALEEAMTSVRWETVTDDGTAEFQVQYGGKTAKI CEEEEEEECCCCCCCCCEEECCCCHHHHHHHHHHCCCEEECCCCCEEEEEEECCEEEEE KLEGLDTTGWQEEPAPPWTEFYLKCFKELFDAIQAKDTHWTDRHPGGKG EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA