Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91787106
Identifier: 91787106
GI number: 91787106
Start: 1252171
End: 1252905
Strand: Direct
Name: 91787106
Synonym: Bpro_1209
Alternate gene names: NA
Gene position: 1252171-1252905 (Clockwise)
Preceding gene: 91787105
Following gene: 91787108
Centisome position: 24.08
GC content: 73.74
Gene sequence:
>735_bases ATGTCGACCACGTTGGCTGTCACGGCGCTGCTGATGGGGCTGGCCGGTGGCCCGCATTGTGTGGCCATGTGCGGCGCGGC CTGCGCCGCCATGTACCGGCCGGGCCAGGGCTCGCCCACGCTTATACCCATATCCCCATCCCCATCCCCATCCGCGTCCG CGTCCATGCCGTCGCACTCACTCTGGATCTTCCTGGCCGGCCGGCTCGCCGGCTATTCCGTGGCCGGGGCGGCCGCCGCG CTGGCGGTGGAAAGCTTTGCCTGGCTCACGGGCCATGCCGCGGCGCTGCGGCCGGTCTGGACGCTGTTCCATCTGGCGGT GCTGGCATGGGGGCTGGTGTTGCTGGCCCAGGCGCGCCAGCCGGCCTGGGTGAATGCGGCCGGCCGCTCGGCCTGGGCGC GCATCCGCCCGCTCGCGGCGGCGCGTGGCGGTGTGTTTGCCACGGGCGCGTTGTGGACCTTCATGCCCTGTGGCCTCCTG TATTCGGCGCTGCTGGTCGCCTCACTGAGCGGCGGCGCGCTGCAAGGGGCGCTGTCGATGGCGCTGTTCGCCGCCGGCAG CGGCGTCTCGCTGGCGTTGGCGCCCACGTTGCTGGCGCGCCTGCGGGGCGCGGGTGACCGGCTTCGGCAGGACTGGGGCA CCCGTGCGGCGGGTGCCCTGTTGGCGCTGACCGCTGCGTGGGCCCTGTGGGCAGACCTTGCCGCCCGCGTGGCCGTCTGG TGCGGGCTGGCCTAG
Upstream 100 bases:
>100_bases GTTTTTTGTGCGGGCCGTGGCCATGGTGTTTGACCGCTACCTGCAGGCCGACCGCAACCGCGCGAAGTTCTCGCGCATTA TCTGAAGCGCGCCAACTGTC
Downstream 100 bases:
>100_bases CCTCAATACCGTTCAGTTAAGCCGTTCGCCCTGAACTCCGCCTGTCCTGAGCCCGTCGAAGGGTCGAAGGGTCGGATCGC AGGTCAACAAGGCTTCGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MSTTLAVTALLMGLAGGPHCVAMCGAACAAMYRPGQGSPTLIPISPSPSPSASASMPSHSLWIFLAGRLAGYSVAGAAAA LAVESFAWLTGHAAALRPVWTLFHLAVLAWGLVLLAQARQPAWVNAAGRSAWARIRPLAAARGGVFATGALWTFMPCGLL YSALLVASLSGGALQGALSMALFAAGSGVSLALAPTLLARLRGAGDRLRQDWGTRAAGALLALTAAWALWADLAARVAVW CGLA
Sequences:
>Translated_244_residues MSTTLAVTALLMGLAGGPHCVAMCGAACAAMYRPGQGSPTLIPISPSPSPSASASMPSHSLWIFLAGRLAGYSVAGAAAA LAVESFAWLTGHAAALRPVWTLFHLAVLAWGLVLLAQARQPAWVNAAGRSAWARIRPLAAARGGVFATGALWTFMPCGLL YSALLVASLSGGALQGALSMALFAAGSGVSLALAPTLLARLRGAGDRLRQDWGTRAAGALLALTAAWALWADLAARVAVW CGLA >Mature_243_residues STTLAVTALLMGLAGGPHCVAMCGAACAAMYRPGQGSPTLIPISPSPSPSASASMPSHSLWIFLAGRLAGYSVAGAAAAL AVESFAWLTGHAAALRPVWTLFHLAVLAWGLVLLAQARQPAWVNAAGRSAWARIRPLAAARGGVFATGALWTFMPCGLLY SALLVASLSGGALQGALSMALFAAGSGVSLALAPTLLARLRGAGDRLRQDWGTRAAGALLALTAAWALWADLAARVAVWC GLA
Specific function: Unknown
COG id: COG2836
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24698; Mature: 24567
Theoretical pI: Translated: 11.45; Mature: 11.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTLAVTALLMGLAGGPHCVAMCGAACAAMYRPGQGSPTLIPISPSPSPSASASMPSHS CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCH LWIFLAGRLAGYSVAGAAAALAVESFAWLTGHAAALRPVWTLFHLAVLAWGLVLLAQARQ HHEEEEHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC PAWVNAAGRSAWARIRPLAAARGGVFATGALWTFMPCGLLYSALLVASLSGGALQGALSM CCEECCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH ALFAAGSGVSLALAPTLLARLRGAGDRLRQDWGTRAAGALLALTAAWALWADLAARVAVW HHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH CGLA HCCC >Mature Secondary Structure STTLAVTALLMGLAGGPHCVAMCGAACAAMYRPGQGSPTLIPISPSPSPSASASMPSHS CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCH LWIFLAGRLAGYSVAGAAAALAVESFAWLTGHAAALRPVWTLFHLAVLAWGLVLLAQARQ HHEEEEHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC PAWVNAAGRSAWARIRPLAAARGGVFATGALWTFMPCGLLYSALLVASLSGGALQGALSM CCEECCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH ALFAAGSGVSLALAPTLLARLRGAGDRLRQDWGTRAAGALLALTAAWALWADLAARVAVW HHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH CGLA HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA