Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91787108
Identifier: 91787108
GI number: 91787108
Start: 1254933
End: 1255532
Strand: Direct
Name: 91787108
Synonym: Bpro_1211
Alternate gene names: NA
Gene position: 1254933-1255532 (Clockwise)
Preceding gene: 91787106
Following gene: 91787110
Centisome position: 24.13
GC content: 54.0
Gene sequence:
>600_bases ATGATCACCGAATGCCCAGGATGCGAAGCCAAGGTTGACTGCGAAGAGAGGGGTGACGTCAACATTGACCTCGAACACAC CGGTGTGCCGACTCGGTACGTACTACTTGAGTGCAAGGTATGTCACCGAGCTCTGCTAGGAATCACTGAGCTAATCCAGA CCGGGGCTGACACTTGGGAATGGGACTCAGCCTCTAGGGTGTGGCCGAGCACAGACGACGCCATTGACTGGAGCATTCCA GAAATTGCCCGAGACTCCCTAGTCGAAGCTCAGGTTTGCTTCAAAGCCAAGGCCTATCAAGCGTGCGCAGTGATGTGCGG CCGTGCTATCGAAGGACTTTGCAAGCATCACGACGCAAAAATCAAGACGCTAGCGGCCGGACTGAAGAAGCTAAAAGACG ATGGCGTGATCGATGAGCGGATTTTCAACTGGGGCGAGGCGCTTCGCGAGAACAGGAACTTGGGAGCGCACGCGACGGCT ATCAAGGTAACTAAGGAAGATGCGCGAGACCTTCTTGATTTTGGTCTGGCCATCTGCGAGTACGTCTATGTTCTCAATGA AAAATTCAACCGCTTCCAAGAGCGTCGCGCAAAGGCCTAA
Upstream 100 bases:
>100_bases TCGTATCCAGTGGCGGAATTCTGGTTTATCTGGTCGGATAAGCTGGGATTGCCAGAATATCCGACGGTCTACATCACGTT AGGCCTTTTAGGGACGAATC
Downstream 100 bases:
>100_bases CCCTTTACTGGGACTTCTCACGTAGTCAAGTAACGGCGGCGATAAATTTTCCTTGGTGACGGTTTTCCTGCACTGGCGTG AAGTGAAGCGGCGGTGAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MITECPGCEAKVDCEERGDVNIDLEHTGVPTRYVLLECKVCHRALLGITELIQTGADTWEWDSASRVWPSTDDAIDWSIP EIARDSLVEAQVCFKAKAYQACAVMCGRAIEGLCKHHDAKIKTLAAGLKKLKDDGVIDERIFNWGEALRENRNLGAHATA IKVTKEDARDLLDFGLAICEYVYVLNEKFNRFQERRAKA
Sequences:
>Translated_199_residues MITECPGCEAKVDCEERGDVNIDLEHTGVPTRYVLLECKVCHRALLGITELIQTGADTWEWDSASRVWPSTDDAIDWSIP EIARDSLVEAQVCFKAKAYQACAVMCGRAIEGLCKHHDAKIKTLAAGLKKLKDDGVIDERIFNWGEALRENRNLGAHATA IKVTKEDARDLLDFGLAICEYVYVLNEKFNRFQERRAKA >Mature_199_residues MITECPGCEAKVDCEERGDVNIDLEHTGVPTRYVLLECKVCHRALLGITELIQTGADTWEWDSASRVWPSTDDAIDWSIP EIARDSLVEAQVCFKAKAYQACAVMCGRAIEGLCKHHDAKIKTLAAGLKKLKDDGVIDERIFNWGEALRENRNLGAHATA IKVTKEDARDLLDFGLAICEYVYVLNEKFNRFQERRAKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22343; Mature: 22343
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITECPGCEAKVDCEERGDVNIDLEHTGVPTRYVLLECKVCHRALLGITELIQTGADTWE CCCCCCCCCCCCCHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC WDSASRVWPSTDDAIDWSIPEIARDSLVEAQVCFKAKAYQACAVMCGRAIEGLCKHHDAK CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH IKTLAAGLKKLKDDGVIDERIFNWGEALRENRNLGAHATAIKVTKEDARDLLDFGLAICE HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHEEEECHHHHHHHHHHHHHHHH YVYVLNEKFNRFQERRAKA HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MITECPGCEAKVDCEERGDVNIDLEHTGVPTRYVLLECKVCHRALLGITELIQTGADTWE CCCCCCCCCCCCCHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC WDSASRVWPSTDDAIDWSIPEIARDSLVEAQVCFKAKAYQACAVMCGRAIEGLCKHHDAK CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH IKTLAAGLKKLKDDGVIDERIFNWGEALRENRNLGAHATAIKVTKEDARDLLDFGLAICE HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHEEEECHHHHHHHHHHHHHHHH YVYVLNEKFNRFQERRAKA HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA