Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is accC [H]
Identifier: 91786998
GI number: 91786998
Start: 1133083
End: 1134432
Strand: Direct
Name: accC [H]
Synonym: Bpro_1100
Alternate gene names: 91786998
Gene position: 1133083-1134432 (Clockwise)
Preceding gene: 91786997
Following gene: 91786999
Centisome position: 21.79
GC content: 61.04
Gene sequence:
>1350_bases ATGTTCAAAAAAATACTGATCGCCAACCGGGGTGAGATTGCCCTCCGGATCCAGCGTGCCTGCCGGGAACTCGGCGTCAA GGCCGTGATGGTCTACTCCGAGGCCGACCGGGAAGCCAAATACATCAAGCTGGCCGATGAGTCGGTGTGTATCGGTCCCG CCCCTTCCTCCCACAGCTACCTCAACATGCCCGCGATCATCTCGGCGGCCGAGGTCACTGACGCCGAGGCGATTCACCCG GGCTATGGTTTCCTGAGCGAAAACGCCGATTTCGCCGAACGGGTTGAAAAGAGCGGTTTCAAGTTCATTGGCCCCACACC CGAGTCGATTCGCATCATGGGCGACAAGGTGTCGGCCAAGCAGACCATGATCAAGGCGGGTGTTCCCTGCGTGCCTGGTT CCGAGGGTGCACTGCCGGATGACCCCGTGGTCATCAAGCGGATCGCCAAACAGGTCGGCTACCCCGTGATCATCAAGGCC GCCGGCGGCGGCGGTGGCCGCGGCATGCGTGTGGTGCACACCGAAGCGGCCTTGCTCCATGCGGTGCAGACCACCAAGGC CGAAGCCGGTGCGGCGTTCGGCAATCCCGAGGTCTACATGGAGAAATTCCTGCAGAATCCGCGACACGTCGAAATCCAGA TCCTGGCCGATCAGCACAGGAACGCGGTCTGGCTTGGCGAGCGCGACTGCTCCATGCAGCGGCGCCACCAGAAGGTCATT GAAGAGGCGCCGGCGCCGGGCATTCCGCGCAAGCTGATAGAAAAAATCGGCGAGCGCTGCGTGGCTGCCGTCAAGAAAAT CAACTACCGTGGTGCCGGCACCTTCGAATTTCTCTACGAGAACGGCGAGTTTTATTTCATCGAAATGAACACCCGCGTGC AGGTGGAGCATCCGGTGACGGAGTGGATCACGGGCGTGGACATCGTGAAAACCCAGATCATGGTGGCCGCCGGCGAAAAG CTGCCCTTTTTGCAGCGCGACATCCAGTTCAAGGGCCATGCGATCGAATGCCGCATCAACGCGGAAGATCCCTACAAGTT CATCCCTTCACCAGGGCGTATCACGACCTGGCACACGCCGGGCGGCCCCGGGGTGCGGGTGGACTCGCATATTTATGCCA ACTACTTCGTGCCGCCCAACTACGACTCCATGATCGGCAAGATCATCGTTCACGGGGACACGCGCGAGCAGGCCCTGGCG CGCATGCGCACGGCGCTGGCCGAGACCGTGGTGGAAGGCATCAACACCAACATCCCGCTGCACCGCGAACTCATGGTGGA CGCCAAATTCATGGACGGCGGCACCAACATCCACTACCTCGAAGAGTGGCTGTCCAAGCGTGACCGATAG
Upstream 100 bases:
>100_bases TACTCTCGGAAAACGGCCAGGCTGTGGAATACGGGCAGCCCCTCTTCATCATTGAGTAAGCAGGCTCCAGCCCTCCTTGC CGAACCAGGCCCATCGACGC
Downstream 100 bases:
>100_bases CTTGAGTTTCACTGCAATGAAAGATCGTGTGACCTTGCGCCGCGCCGGGCCGCCCCAGGCAAGCCCAGCCCCCTCGGGGG GCAGAGAGCTACACGGAGTG
Product: acetyl-CoA carboxylase, biotin carboxylase
Products: NA
Alternate protein names: Acetyl-CoA carboxylase subunit A; ACC [H]
Number of amino acids: Translated: 449; Mature: 449
Protein sequence:
>449_residues MFKKILIANRGEIALRIQRACRELGVKAVMVYSEADREAKYIKLADESVCIGPAPSSHSYLNMPAIISAAEVTDAEAIHP GYGFLSENADFAERVEKSGFKFIGPTPESIRIMGDKVSAKQTMIKAGVPCVPGSEGALPDDPVVIKRIAKQVGYPVIIKA AGGGGGRGMRVVHTEAALLHAVQTTKAEAGAAFGNPEVYMEKFLQNPRHVEIQILADQHRNAVWLGERDCSMQRRHQKVI EEAPAPGIPRKLIEKIGERCVAAVKKINYRGAGTFEFLYENGEFYFIEMNTRVQVEHPVTEWITGVDIVKTQIMVAAGEK LPFLQRDIQFKGHAIECRINAEDPYKFIPSPGRITTWHTPGGPGVRVDSHIYANYFVPPNYDSMIGKIIVHGDTREQALA RMRTALAETVVEGINTNIPLHRELMVDAKFMDGGTNIHYLEEWLSKRDR
Sequences:
>Translated_449_residues MFKKILIANRGEIALRIQRACRELGVKAVMVYSEADREAKYIKLADESVCIGPAPSSHSYLNMPAIISAAEVTDAEAIHP GYGFLSENADFAERVEKSGFKFIGPTPESIRIMGDKVSAKQTMIKAGVPCVPGSEGALPDDPVVIKRIAKQVGYPVIIKA AGGGGGRGMRVVHTEAALLHAVQTTKAEAGAAFGNPEVYMEKFLQNPRHVEIQILADQHRNAVWLGERDCSMQRRHQKVI EEAPAPGIPRKLIEKIGERCVAAVKKINYRGAGTFEFLYENGEFYFIEMNTRVQVEHPVTEWITGVDIVKTQIMVAAGEK LPFLQRDIQFKGHAIECRINAEDPYKFIPSPGRITTWHTPGGPGVRVDSHIYANYFVPPNYDSMIGKIIVHGDTREQALA RMRTALAETVVEGINTNIPLHRELMVDAKFMDGGTNIHYLEEWLSKRDR >Mature_449_residues MFKKILIANRGEIALRIQRACRELGVKAVMVYSEADREAKYIKLADESVCIGPAPSSHSYLNMPAIISAAEVTDAEAIHP GYGFLSENADFAERVEKSGFKFIGPTPESIRIMGDKVSAKQTMIKAGVPCVPGSEGALPDDPVVIKRIAKQVGYPVIIKA AGGGGGRGMRVVHTEAALLHAVQTTKAEAGAAFGNPEVYMEKFLQNPRHVEIQILADQHRNAVWLGERDCSMQRRHQKVI EEAPAPGIPRKLIEKIGERCVAAVKKINYRGAGTFEFLYENGEFYFIEMNTRVQVEHPVTEWITGVDIVKTQIMVAAGEK LPFLQRDIQFKGHAIECRINAEDPYKFIPSPGRITTWHTPGGPGVRVDSHIYANYFVPPNYDSMIGKIIVHGDTREQALA RMRTALAETVVEGINTNIPLHRELMVDAKFMDGGTNIHYLEEWLSKRDR
Specific function: This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA [H]
COG id: COG0439
COG function: function code I; Biotin carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotin carboxylation domain [H]
Homologues:
Organism=Homo sapiens, GI65506442, Length=445, Percent_Identity=47.1910112359551, Blast_Score=415, Evalue=1e-116, Organism=Homo sapiens, GI189095269, Length=445, Percent_Identity=47.1910112359551, Blast_Score=414, Evalue=1e-116, Organism=Homo sapiens, GI295821183, Length=445, Percent_Identity=47.1910112359551, Blast_Score=414, Evalue=1e-116, Organism=Homo sapiens, GI116805327, Length=440, Percent_Identity=47.7272727272727, Blast_Score=413, Evalue=1e-115, Organism=Homo sapiens, GI106049528, Length=451, Percent_Identity=45.0110864745011, Blast_Score=369, Evalue=1e-102, Organism=Homo sapiens, GI106049295, Length=451, Percent_Identity=45.0110864745011, Blast_Score=369, Evalue=1e-102, Organism=Homo sapiens, GI106049292, Length=451, Percent_Identity=45.0110864745011, Blast_Score=369, Evalue=1e-102, Organism=Homo sapiens, GI38679960, Length=508, Percent_Identity=31.1023622047244, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI38679977, Length=508, Percent_Identity=31.1023622047244, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI38679967, Length=508, Percent_Identity=31.1023622047244, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI38679974, Length=508, Percent_Identity=31.1023622047244, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI38679971, Length=508, Percent_Identity=31.1023622047244, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI134142062, Length=510, Percent_Identity=30.5882352941176, Blast_Score=223, Evalue=4e-58, Organism=Escherichia coli, GI1789654, Length=449, Percent_Identity=66.369710467706, Blast_Score=595, Evalue=1e-171, Organism=Escherichia coli, GI1786216, Length=243, Percent_Identity=23.8683127572016, Blast_Score=62, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17567343, Length=445, Percent_Identity=47.1910112359551, Blast_Score=414, Evalue=1e-116, Organism=Caenorhabditis elegans, GI71987519, Length=441, Percent_Identity=46.7120181405896, Blast_Score=390, Evalue=1e-109, Organism=Caenorhabditis elegans, GI17562816, Length=448, Percent_Identity=43.9732142857143, Blast_Score=352, Evalue=2e-97, Organism=Caenorhabditis elegans, GI133931226, Length=490, Percent_Identity=29.3877551020408, Blast_Score=212, Evalue=4e-55, Organism=Caenorhabditis elegans, GI71997163, Length=510, Percent_Identity=27.4509803921569, Blast_Score=183, Evalue=1e-46, Organism=Caenorhabditis elegans, GI71997168, Length=510, Percent_Identity=27.4509803921569, Blast_Score=183, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6319685, Length=446, Percent_Identity=41.7040358744395, Blast_Score=355, Evalue=7e-99, Organism=Saccharomyces cerevisiae, GI6319695, Length=440, Percent_Identity=46.1363636363636, Blast_Score=339, Evalue=6e-94, Organism=Saccharomyces cerevisiae, GI6321376, Length=449, Percent_Identity=46.1024498886414, Blast_Score=335, Evalue=8e-93, Organism=Saccharomyces cerevisiae, GI6324343, Length=525, Percent_Identity=31.047619047619, Blast_Score=221, Evalue=2e-58, Organism=Saccharomyces cerevisiae, GI6323863, Length=464, Percent_Identity=32.7586206896552, Blast_Score=216, Evalue=5e-57, Organism=Drosophila melanogaster, GI24651757, Length=443, Percent_Identity=45.1467268623025, Blast_Score=383, Evalue=1e-106, Organism=Drosophila melanogaster, GI281363050, Length=451, Percent_Identity=46.5631929046563, Blast_Score=378, Evalue=1e-105, Organism=Drosophila melanogaster, GI24652224, Length=451, Percent_Identity=46.5631929046563, Blast_Score=378, Evalue=1e-105, Organism=Drosophila melanogaster, GI24652222, Length=451, Percent_Identity=46.5631929046563, Blast_Score=378, Evalue=1e-105, Organism=Drosophila melanogaster, GI24652220, Length=451, Percent_Identity=46.5631929046563, Blast_Score=378, Evalue=1e-105, Organism=Drosophila melanogaster, GI24652218, Length=451, Percent_Identity=46.5631929046563, Blast_Score=378, Evalue=1e-105, Organism=Drosophila melanogaster, GI24652212, Length=451, Percent_Identity=46.5631929046563, Blast_Score=378, Evalue=1e-105, Organism=Drosophila melanogaster, GI24652210, Length=451, Percent_Identity=46.5631929046563, Blast_Score=378, Evalue=1e-105, Organism=Drosophila melanogaster, GI24652214, Length=451, Percent_Identity=46.5631929046563, Blast_Score=378, Evalue=1e-105, Organism=Drosophila melanogaster, GI19921944, Length=451, Percent_Identity=46.5631929046563, Blast_Score=378, Evalue=1e-105, Organism=Drosophila melanogaster, GI24652216, Length=451, Percent_Identity=46.5631929046563, Blast_Score=378, Evalue=1e-105, Organism=Drosophila melanogaster, GI24651759, Length=406, Percent_Identity=44.3349753694581, Blast_Score=343, Evalue=2e-94, Organism=Drosophila melanogaster, GI161076409, Length=503, Percent_Identity=30.0198807157058, Blast_Score=213, Evalue=3e-55, Organism=Drosophila melanogaster, GI24586458, Length=503, Percent_Identity=30.0198807157058, Blast_Score=213, Evalue=3e-55, Organism=Drosophila melanogaster, GI161076407, Length=503, Percent_Identity=30.0198807157058, Blast_Score=212, Evalue=3e-55, Organism=Drosophila melanogaster, GI24586460, Length=503, Percent_Identity=30.0198807157058, Blast_Score=212, Evalue=3e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004549 - InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR011764 - InterPro: IPR005482 - InterPro: IPR005479 - InterPro: IPR005481 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 [H]
Pfam domain/function: PF02785 Biotin_carb_C; PF00289 CPSase_L_chain; PF02786 CPSase_L_D2 [H]
EC number: =6.3.4.14; =6.4.1.2 [H]
Molecular weight: Translated: 49814; Mature: 49814
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: PS50975 ATP_GRASP ; PS00866 CPSASE_1 ; PS00867 CPSASE_2 ; PS50979 BC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKKILIANRGEIALRIQRACRELGVKAVMVYSEADREAKYIKLADESVCIGPAPSSHSY CCCEEEEECCCCEEHHHHHHHHHCCCEEEEEEECCCCCCEEEEEECCCEEECCCCCCCCE LNMPAIISAAEVTDAEAIHPGYGFLSENADFAERVEKSGFKFIGPTPESIRIMGDKVSAK ECCCHHEEHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCEEEECCCHHHH QTMIKAGVPCVPGSEGALPDDPVVIKRIAKQVGYPVIIKAAGGGGGRGMRVVHTEAALLH HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEHHHHHHH AVQTTKAEAGAAFGNPEVYMEKFLQNPRHVEIQILADQHRNAVWLGERDCSMQRRHQKVI HHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCEEEECCCCHHHHHHHHHHH EEAPAPGIPRKLIEKIGERCVAAVKKINYRGAGTFEFLYENGEFYFIEMNTRVQVEHPVT HHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEECCEEEECCCHH EWITGVDIVKTQIMVAAGEKLPFLQRDIQFKGHAIECRINAEDPYKFIPSPGRITTWHTP HHHCCHHHHHHEEEEECCCCCCCHHHHHEECCEEEEEEECCCCCCEECCCCCCEEEEECC GGPGVRVDSHIYANYFVPPNYDSMIGKIIVHGDTREQALARMRTALAETVVEGINTNIPL CCCCEEECCEEEEEEECCCCHHHCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCE HRELMVDAKFMDGGTNIHYLEEWLSKRDR EHEEEEEEEEECCCCCHHHHHHHHHHCCC >Mature Secondary Structure MFKKILIANRGEIALRIQRACRELGVKAVMVYSEADREAKYIKLADESVCIGPAPSSHSY CCCEEEEECCCCEEHHHHHHHHHCCCEEEEEEECCCCCCEEEEEECCCEEECCCCCCCCE LNMPAIISAAEVTDAEAIHPGYGFLSENADFAERVEKSGFKFIGPTPESIRIMGDKVSAK ECCCHHEEHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCEEEECCCHHHH QTMIKAGVPCVPGSEGALPDDPVVIKRIAKQVGYPVIIKAAGGGGGRGMRVVHTEAALLH HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEHHHHHHH AVQTTKAEAGAAFGNPEVYMEKFLQNPRHVEIQILADQHRNAVWLGERDCSMQRRHQKVI HHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCEEEECCCCHHHHHHHHHHH EEAPAPGIPRKLIEKIGERCVAAVKKINYRGAGTFEFLYENGEFYFIEMNTRVQVEHPVT HHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEECCEEEECCCHH EWITGVDIVKTQIMVAAGEKLPFLQRDIQFKGHAIECRINAEDPYKFIPSPGRITTWHTP HHHCCHHHHHHEEEEECCCCCCCHHHHHEECCEEEEEEECCCCCCEECCCCCCEEEEECC GGPGVRVDSHIYANYFVPPNYDSMIGKIIVHGDTREQALARMRTALAETVVEGINTNIPL CCCCEEECCEEEEEEECCCCHHHCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCE HRELMVDAKFMDGGTNIHYLEEWLSKRDR EHEEEEEEEEECCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9560425 [H]