Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is accB [H]
Identifier: 91786997
GI number: 91786997
Start: 1132589
End: 1133041
Strand: Direct
Name: accB [H]
Synonym: Bpro_1099
Alternate gene names: 91786997
Gene position: 1132589-1133041 (Clockwise)
Preceding gene: 91786996
Following gene: 91786998
Centisome position: 21.78
GC content: 58.5
Gene sequence:
>453_bases ATGGATCTAAGAAAACTCAAGACACTGATCGACCTCGTCTCGGAGTCCAATGTGTCCGAACTTGAGATTACCGAAGCCGA GGGCAAGGTACGCATTGTCAAATCCAGTGGTGCTCCTGTCGTCATGCAGCAGGCTCCCGTCGCCATGGTAGCAGCTCCTG CGCCCGCTCCCGCGAATGGCGTGCCCGCCGTTGAAACCACCGCGCCGGCCGCTCCCGCTGGCCACGCCGTCAAATCACCC ATGGTCGGCACCTTTTATCGCTCCGCCAGCCCGGGCGCCAAGCCTTTTGTCGAACTTGGCAGCGTGGTGAAGGAAGGTGA CACGATCTGCATCATCGAGGCCATGAAGATCCTCAACGAGATTGAGGCCGACAAGTCCGGCACCATCACCAAGATACTCT CGGAAAACGGCCAGGCTGTGGAATACGGGCAGCCCCTCTTCATCATTGAGTAA
Upstream 100 bases:
>100_bases AATGCAAAAAGAACGAAGATCGGCAGCGCCGATTTTCATGGGCTATTCAAGCTGTGTGCTGCCATCCTGGCGCCCAGTAT CTACCGTCGTTGGAGCATCT
Downstream 100 bases:
>100_bases GCAGGCTCCAGCCCTCCTTGCCGAACCAGGCCCATCGACGCATGTTCAAAAAAATACTGATCGCCAACCGGGGTGAGATT GCCCTCCGGATCCAGCGTGC
Product: biotin carboxyl carrier protein
Products: Malonyl-CoA; malonyl-CoA; phosphate; ADP [C]
Alternate protein names: BCCP [H]
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MDLRKLKTLIDLVSESNVSELEITEAEGKVRIVKSSGAPVVMQQAPVAMVAAPAPAPANGVPAVETTAPAAPAGHAVKSP MVGTFYRSASPGAKPFVELGSVVKEGDTICIIEAMKILNEIEADKSGTITKILSENGQAVEYGQPLFIIE
Sequences:
>Translated_150_residues MDLRKLKTLIDLVSESNVSELEITEAEGKVRIVKSSGAPVVMQQAPVAMVAAPAPAPANGVPAVETTAPAAPAGHAVKSP MVGTFYRSASPGAKPFVELGSVVKEGDTICIIEAMKILNEIEADKSGTITKILSENGQAVEYGQPLFIIE >Mature_150_residues MDLRKLKTLIDLVSESNVSELEITEAEGKVRIVKSSGAPVVMQQAPVAMVAAPAPAPANGVPAVETTAPAAPAGHAVKSP MVGTFYRSASPGAKPFVELGSVVKEGDTICIIEAMKILNEIEADKSGTITKILSENGQAVEYGQPLFIIE
Specific function: This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA [H]
COG id: COG0511
COG function: function code I; Biotin carboxyl carrier protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotinyl-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1789653, Length=157, Percent_Identity=56.0509554140127, Blast_Score=157, Evalue=2e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001249 - InterPro: IPR001882 - InterPro: IPR000089 - InterPro: IPR011053 [H]
Pfam domain/function: PF00364 Biotin_lipoyl [H]
EC number: NA
Molecular weight: Translated: 15613; Mature: 15613
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: PS50968 BIOTINYL_LIPOYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLRKLKTLIDLVSESNVSELEITEAEGKVRIVKSSGAPVVMQQAPVAMVAAPAPAPANG CCHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCCEEEECCCEEEEECCCCCCCCC VPAVETTAPAAPAGHAVKSPMVGTFYRSASPGAKPFVELGSVVKEGDTICIIEAMKILNE CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHH IEADKSGTITKILSENGQAVEYGQPLFIIE HCCCCCCCEEEECCCCCCEEECCCEEEEEC >Mature Secondary Structure MDLRKLKTLIDLVSESNVSELEITEAEGKVRIVKSSGAPVVMQQAPVAMVAAPAPAPANG CCHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCCEEEECCCEEEEECCCCCCCCC VPAVETTAPAAPAGHAVKSPMVGTFYRSASPGAKPFVELGSVVKEGDTICIIEAMKILNE CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHH IEADKSGTITKILSENGQAVEYGQPLFIIE HCCCCCCCEEEECCCCCCEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Acetyl-CoA; HCO3-; Proton; acetyl-CoA; ATP [C]
Specific reaction: acetyl-CoA = malonyl-CoA HCO3- + Proton + acetyl-CoA + ATP = malonyl-CoA + phosphate + ADP [C]
General reaction: Ligases; Forming Carbon-Carbon Bonds; acetyl-CoA carboxylase Reaction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]