Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91786737
Identifier: 91786737
GI number: 91786737
Start: 858247
End: 858768
Strand: Direct
Name: 91786737
Synonym: Bpro_0835
Alternate gene names: NA
Gene position: 858247-858768 (Clockwise)
Preceding gene: 91786736
Following gene: 91786742
Centisome position: 16.5
GC content: 61.49
Gene sequence:
>522_bases ATGACTTTCAAACCGGCCGCTGCGGCCCGCCTTTCTTGTGTAGCGCTTGCGCTGGCTTTCAGTTGCGCGGTCTCGGCCCA GAGCGCCACGGATGACCCGGACTGGAAGGAGTCGGAGGCTCCGCCACCTCCGGCATTCGATGCGGGCAAGCTGGTTACTT TCGATGTGTCACCCAATTCCTCGCTGGTCTTCGGCGTTGATCCCGCGACTATCCGCATTTCCAACAGCGACGGCCTTGTG CGCTATGTGATGGTGGCGACCAGCGCGAGTGGTGCGCGCAACGTGATGTACGAAGGCATACGCTGCGCTACCGGGGAATA CAAGACCTACGCGCGATACTCGCCCGATGGCCGCTGGACCCCGGTGGCCAATGCGGAGTGGCGCTCCATGTTCGGAAACA TGCCGTCCAAGCATGTTTTGCGGTTCGCCAAGGCCGGCGCATGCGACAACGCCGCACCGGCGCCTTCAGTCACCGTCCTG ATAAGCCGGCTGAAAAGTCCGAATTTCAGGATCTCGGAATAG
Upstream 100 bases:
>100_bases ACACGGCCAGATTGGGCGCCTCGTTTGAATTGCCCCCTGGCGCCACCTTTGAACCCGATCCGCAGACCAGCCTGGGCGCG GATCCTTCGCCCCCCAAAAC
Downstream 100 bases:
>100_bases CACACCGTACCCTGTCGTGCGGGGGCATCGCCCGGTCGTATGGGGTCGGGAGGACTGGTTGCTCCGGTGCACCTTTCGAT GCCGGCGGTGCTCTGCCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MTFKPAAAARLSCVALALAFSCAVSAQSATDDPDWKESEAPPPPAFDAGKLVTFDVSPNSSLVFGVDPATIRISNSDGLV RYVMVATSASGARNVMYEGIRCATGEYKTYARYSPDGRWTPVANAEWRSMFGNMPSKHVLRFAKAGACDNAAPAPSVTVL ISRLKSPNFRISE
Sequences:
>Translated_173_residues MTFKPAAAARLSCVALALAFSCAVSAQSATDDPDWKESEAPPPPAFDAGKLVTFDVSPNSSLVFGVDPATIRISNSDGLV RYVMVATSASGARNVMYEGIRCATGEYKTYARYSPDGRWTPVANAEWRSMFGNMPSKHVLRFAKAGACDNAAPAPSVTVL ISRLKSPNFRISE >Mature_172_residues TFKPAAAARLSCVALALAFSCAVSAQSATDDPDWKESEAPPPPAFDAGKLVTFDVSPNSSLVFGVDPATIRISNSDGLVR YVMVATSASGARNVMYEGIRCATGEYKTYARYSPDGRWTPVANAEWRSMFGNMPSKHVLRFAKAGACDNAAPAPSVTVLI SRLKSPNFRISE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18457; Mature: 18326
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFKPAAAARLSCVALALAFSCAVSAQSATDDPDWKESEAPPPPAFDAGKLVTFDVSPNS CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC SLVFGVDPATIRISNSDGLVRYVMVATSASGARNVMYEGIRCATGEYKTYARYSPDGRWT EEEEECCCEEEEEECCCCEEEEEEEEECCCCCHHHHHCCEEECCCCCCEEEEECCCCCCC PVANAEWRSMFGNMPSKHVLRFAKAGACDNAAPAPSVTVLISRLKSPNFRISE CCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEECC >Mature Secondary Structure TFKPAAAARLSCVALALAFSCAVSAQSATDDPDWKESEAPPPPAFDAGKLVTFDVSPNS CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC SLVFGVDPATIRISNSDGLVRYVMVATSASGARNVMYEGIRCATGEYKTYARYSPDGRWT EEEEECCCEEEEEECCCCEEEEEEEEECCCCCHHHHHCCEEECCCCCCEEEEECCCCCCC PVANAEWRSMFGNMPSKHVLRFAKAGACDNAAPAPSVTVLISRLKSPNFRISE CCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA