Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91786685

Identifier: 91786685

GI number: 91786685

Start: 805662

End: 806336

Strand: Direct

Name: 91786685

Synonym: Bpro_0783

Alternate gene names: NA

Gene position: 805662-806336 (Clockwise)

Preceding gene: 91786684

Following gene: 91786686

Centisome position: 15.49

GC content: 55.85

Gene sequence:

>675_bases
ATGGCAAAAAAACCAAAATCTTCTGTCGATTTCGGCGGTATTCAACGCAGCCTGAAAGCCCAGTTCAGCGGGCTGGATCC
GAATGATCCAACCTCGTGGCCGGCTTTGCCGCGCTTCCTGCTATGCCTTGCCGTTACGGTGCTGGTGGTCGTTGCCATCT
GGTTTTTAGGCTTGAACGCCTCTGACGAAGAGTTGACGGCGGAAAAAGCAAAAGAAGTTCAGCTCAGGGACGACTACAAG
AAGAAGCTTGTGCAGGCCGTCAATCTGGAGGCCCTGAAGAAACAGCGTGAACAGGTCCAGCAATACGTGACGCAGCTTGA
AAAGCAGCTGCCCAGCAAAGCTGAGATGGATGCCCTGCTGTCTGATATCAATCAGGCCGGACTGGGGCGCAGCCTGCAGT
TTGAGTTGTTTCGCCCGGGTCAGGTGAGCGTCAGGGAGTATTACGCGGAATTGCCGATTGCGGTGCGCGTGTCGGGGCGC
TATCACGATCTTGGCGCGTTTGCGGCGGATATTGCCAATCTGTCCCGTATCGTCACCCTGAACAATCTGAGTATCCTGCC
GGCCAAGGATGGCAATCTGACAATGGATACCACGGCCAAGACTTTCCGTTACCTCGACGGTGACGAGGTGGCCTTGCAGC
GCAAGAGCGCTCCCGCCAAGGGGGCCAAGAAATGA

Upstream 100 bases:

>100_bases
GCGCTTCCTGCGGCGTCTTCTGCCGTAGCCAAGCCAGCTCCCGTCGCCTCGGCGTCGGCAGCGGCCAAGATATGAAGACC
AAGGTTGAACGAGACTGATC

Downstream 100 bases:

>100_bases
GACTCAATCGCCCTGCATTGATCGTCAGTTTGACGCTGGTTTTTCTCGGAATGGCCGGTTGCAGTTCTTCCGAACAGGAA
GAACTGCAGCAGTGGATGGT

Product: pilus assembly protein PilO

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein PilO; Type 4 Fimbrial Biogenesis Protein PilO; Type IV Pilus Assembly Protein PilO; Fimbrial Assembly Membrane Protein; Fimbrial Assembly Protein PilO; Tfp Pilus Assembly Protein PilO; Pilus Assembly Protein; Fimbrial Type-4 Assembly Transmembrane Protein; Fimbrial Type-4 Assembly Membrane Transmembrane Protein; Type IV Pilus Assembly Membrane Transmembrane Protein; Pilo Protein; Pilus Assembly Protein Pilo; PilO Type IV Pilus Assembly Protein; Fimbriae Biogenesis-Related Fusion Protein; Fimbrial Type-IV Assembly Protein PilO; Fimbrial Assembly Protein; Pili Assembly Protein PilO; Pilus Iv Assembly Membrane Protein Pilo; Type 4 Fimbrial Biogenesis Protein; Pilus Assembly Protein PilO-Like

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MAKKPKSSVDFGGIQRSLKAQFSGLDPNDPTSWPALPRFLLCLAVTVLVVVAIWFLGLNASDEELTAEKAKEVQLRDDYK
KKLVQAVNLEALKKQREQVQQYVTQLEKQLPSKAEMDALLSDINQAGLGRSLQFELFRPGQVSVREYYAELPIAVRVSGR
YHDLGAFAADIANLSRIVTLNNLSILPAKDGNLTMDTTAKTFRYLDGDEVALQRKSAPAKGAKK

Sequences:

>Translated_224_residues
MAKKPKSSVDFGGIQRSLKAQFSGLDPNDPTSWPALPRFLLCLAVTVLVVVAIWFLGLNASDEELTAEKAKEVQLRDDYK
KKLVQAVNLEALKKQREQVQQYVTQLEKQLPSKAEMDALLSDINQAGLGRSLQFELFRPGQVSVREYYAELPIAVRVSGR
YHDLGAFAADIANLSRIVTLNNLSILPAKDGNLTMDTTAKTFRYLDGDEVALQRKSAPAKGAKK
>Mature_223_residues
AKKPKSSVDFGGIQRSLKAQFSGLDPNDPTSWPALPRFLLCLAVTVLVVVAIWFLGLNASDEELTAEKAKEVQLRDDYKK
KLVQAVNLEALKKQREQVQQYVTQLEKQLPSKAEMDALLSDINQAGLGRSLQFELFRPGQVSVREYYAELPIAVRVSGRY
HDLGAFAADIANLSRIVTLNNLSILPAKDGNLTMDTTAKTFRYLDGDEVALQRKSAPAKGAKK

Specific function: Unknown

COG id: COG3167

COG function: function code NU; Tfp pilus assembly protein PilO

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24792; Mature: 24661

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKPKSSVDFGGIQRSLKAQFSGLDPNDPTSWPALPRFLLCLAVTVLVVVAIWFLGLNA
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
SDEELTAEKAKEVQLRDDYKKKLVQAVNLEALKKQREQVQQYVTQLEKQLPSKAEMDALL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
SDINQAGLGRSLQFELFRPGQVSVREYYAELPIAVRVSGRYHDLGAFAADIANLSRIVTL
HHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHEEEE
NNLSILPAKDGNLTMDTTAKTFRYLDGDEVALQRKSAPAKGAKK
CCEEEEECCCCCEEECCHHHHHHHCCCCHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AKKPKSSVDFGGIQRSLKAQFSGLDPNDPTSWPALPRFLLCLAVTVLVVVAIWFLGLNA
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
SDEELTAEKAKEVQLRDDYKKKLVQAVNLEALKKQREQVQQYVTQLEKQLPSKAEMDALL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
SDINQAGLGRSLQFELFRPGQVSVREYYAELPIAVRVSGRYHDLGAFAADIANLSRIVTL
HHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHEEEE
NNLSILPAKDGNLTMDTTAKTFRYLDGDEVALQRKSAPAKGAKK
CCEEEEECCCCCEEECCHHHHHHHCCCCHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA