Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91786684
Identifier: 91786684
GI number: 91786684
Start: 804953
End: 805636
Strand: Direct
Name: 91786684
Synonym: Bpro_0782
Alternate gene names: NA
Gene position: 804953-805636 (Clockwise)
Preceding gene: 91786683
Following gene: 91786685
Centisome position: 15.48
GC content: 58.19
Gene sequence:
>684_bases GTGATTCTGATCAATCTGCTCCCGCACCGGGAGGCTGCGCGCAAACGCAGGCGCGAGGTGTTTTATGCGACCTTGGGCGT TGCCGCGCTGGCGGGTGTGCTGATTTCCGGCGCTGTGTACACCTGGTATCTGGCTCAAATTGAAAGTCAGCAGACAAAAA ACAACTTTCTGAAAACGGAAATCACCCGTCTTGAAGGTCAGATCAAGGAGATCGCAACCTTGCAGGCGGAGATCGCCGCG CTGAGGGCTCGCCAGAATGCAGTGGAAGATTTGCAGGGAAACCGCAACCTGCCGGTTTACCTGCTCAGTGAATTGGTCAA GCAATTGCCTGATGGCGTCTATATCAACAGCATGAAGCAGGACAACCAGACCGTCCTGATCATCGGTGTTGCGCAATCCA ACGAGCGGGTTTCCGAACTGTTGCGCAATCTGGCCAACAACAGCCCCTGGTTGACCAAGCCGGAACTCGTGGAAATCACC GCCGGCTCGGTCACGCTGAGCCAGCGTGACCAGCGGCGGGTAGCCAACTTCTCCATGCGCGTGGGGCTCAAACGGGCCAG TGATCCGAAAGCTGCAAGTTCTGCGGCCTCAAGTTCAGTAGCTGGGCCTGCGCTTCCTGCGGCGTCTTCTGCCGTAGCCA AGCCAGCTCCCGTCGCCTCGGCGTCGGCAGCGGCCAAGATATGA
Upstream 100 bases:
>100_bases AAGGCATGGAGTTGGGTAGCGATGTCCGGGAAAAGAAAATGCGGCGTGAAGCGTCATCTTATTTGACGTCTTGCGGCTTG GCCTTGCGGAGGTTTGTGCA
Downstream 100 bases:
>100_bases AGACCAAGGTTGAACGAGACTGATCATGGCAAAAAAACCAAAATCTTCTGTCGATTTCGGCGGTATTCAACGCAGCCTGA AAGCCCAGTTCAGCGGGCTG
Product: fimbrial assembly
Products: NA
Alternate protein names: Fimbrial Assembly; Type IV Pilus Biogenesis Protein PilN; Type 4 Fimbrial Biogenesis Protein PilN; Fimbrial Assembly Protein; Tfp Pilus Assembly Protein PilN; Type IV Pilus Assembly Protein PilN; Fimbrial Assembly Protein PilN; Periplasmic Sensor Signal Transduction Histidine Kinase; Tfp Pilus Assembly Protein; PilN Type IV Pilus Assembly Protein; Type IV Pilus Biogenesis Fimbrial Assembly; Fimbrial Assembly Membrane Protein; Type IV Fimbrial Biogenesis Protein PilN; Fimbriae Biogenesis-Like Protein; Type 4 Fimbrial Biogenesis Protein; Type IV Pilus Assembly Protein Piln; Fimbrial Type-4 Assembly Transmembrane Protein
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MILINLLPHREAARKRRREVFYATLGVAALAGVLISGAVYTWYLAQIESQQTKNNFLKTEITRLEGQIKEIATLQAEIAA LRARQNAVEDLQGNRNLPVYLLSELVKQLPDGVYINSMKQDNQTVLIIGVAQSNERVSELLRNLANNSPWLTKPELVEIT AGSVTLSQRDQRRVANFSMRVGLKRASDPKAASSAASSSVAGPALPAASSAVAKPAPVASASAAAKI
Sequences:
>Translated_227_residues MILINLLPHREAARKRRREVFYATLGVAALAGVLISGAVYTWYLAQIESQQTKNNFLKTEITRLEGQIKEIATLQAEIAA LRARQNAVEDLQGNRNLPVYLLSELVKQLPDGVYINSMKQDNQTVLIIGVAQSNERVSELLRNLANNSPWLTKPELVEIT AGSVTLSQRDQRRVANFSMRVGLKRASDPKAASSAASSSVAGPALPAASSAVAKPAPVASASAAAKI >Mature_227_residues MILINLLPHREAARKRRREVFYATLGVAALAGVLISGAVYTWYLAQIESQQTKNNFLKTEITRLEGQIKEIATLQAEIAA LRARQNAVEDLQGNRNLPVYLLSELVKQLPDGVYINSMKQDNQTVLIIGVAQSNERVSELLRNLANNSPWLTKPELVEIT AGSVTLSQRDQRRVANFSMRVGLKRASDPKAASSAASSSVAGPALPAASSAVAKPAPVASASAAAKI
Specific function: Unknown
COG id: COG3166
COG function: function code NU; Tfp pilus assembly protein PilN
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24470; Mature: 24470
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILINLLPHREAARKRRREVFYATLGVAALAGVLISGAVYTWYLAQIESQQTKNNFLKTE CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITRLEGQIKEIATLQAEIAALRARQNAVEDLQGNRNLPVYLLSELVKQLPDGVYINSMKQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEECCCC DNQTVLIIGVAQSNERVSELLRNLANNSPWLTKPELVEITAGSVTLSQRDQRRVANFSMR CCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEECHHHHHHHHHHHHH VGLKRASDPKAASSAASSSVAGPALPAASSAVAKPAPVASASAAAKI HCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCHHHCCC >Mature Secondary Structure MILINLLPHREAARKRRREVFYATLGVAALAGVLISGAVYTWYLAQIESQQTKNNFLKTE CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITRLEGQIKEIATLQAEIAALRARQNAVEDLQGNRNLPVYLLSELVKQLPDGVYINSMKQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEECCCC DNQTVLIIGVAQSNERVSELLRNLANNSPWLTKPELVEITAGSVTLSQRDQRRVANFSMR CCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEECHHHHHHHHHHHHH VGLKRASDPKAASSAASSSVAGPALPAASSAVAKPAPVASASAAAKI HCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA