Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is eutJ [C]
Identifier: 91786683
GI number: 91786683
Start: 803877
End: 804956
Strand: Direct
Name: eutJ [C]
Synonym: Bpro_0781
Alternate gene names: 91786683
Gene position: 803877-804956 (Clockwise)
Preceding gene: 91786681
Following gene: 91786684
Centisome position: 15.46
GC content: 58.43
Gene sequence:
>1080_bases TTGATCTCTTTGGGATCGTTATTCAACAGTCAGGAGCCCGCTCTGCTGGGCCTCGATATCAGTTCGTCCAGCGTCAAGCT GGTGGAGTTGAGCCGTGACAAGGCGGGCAACCTGGTGCTTGACCGCTGTGCGATAGAGCCGCTGGAGCGCGGCTGGATCA CTGATGGCAATGTCGAGAAATTCGACGAAGTTGCCGAGGCGGTGCGCCGGCTGGTCAAAAAGAGCGGAACGCGCACCAAA AACGTGGCCATGGCACTCCCTGCCTCGGCGGTGATTACCAAGAAGATCATCCTGCCGGGCGGCCTGAGCGATTCCGAACT TGAGCTTCAGGTCGAAACCGAAGCCAATCAGTACATACCCTTTTCGCTCGATGAGGTCAGCCTGGATTTCTGCGTGGTGG GGCCCAGCGCCACTTCGAGTGGCGACGTCGAGGTCCTGATTGCCGCTTCGCGCAAGGAAAAAGTGCAGGATCGGCAGGGG CTGGCTGAGGCCGCCGGGCTGAAACCCATTGTGATCGATGTCGAGTCTTACGCCTCGCGGCTGGCGACCGCGCGGCTGAT CGAGAGTCTGCCCAACAAGGGGGTGGATACGCTGGTTGCCCTGTTTGAAGTGGGCGCCTTGACCACCAGCATGCAGGTCA TCAAGAACGATGAGGTGCTGTACGAGCGCGACCAGGCCTTTGGCGGCGCGCAACTCACTCAGCTGATTGTTCGTCAATAC GGTTTTTCGTCCGAAGAGGCGGAGAGTAAAAAGCGCAGCGGCGACCTGCCGGAAGATTACGAATCGGGTGTCCTGAAACC TTTTGTCGAGAGCATGGCCCAGGAAATCGGCCGGGCACTCCAGTTCTTCTTCACCAGCACGCCCCATAACAAAGTCGATT ACGTGATGCTGGCGGGCGGCTCATCCGCATTGCCTGGGCTCAATGATGCCGTCACGCAGCAGACTTCCTTTGCCTGCCTG CTGGCCAATCCCTTTGAAGGCATGGAGTTGGGTAGCGATGTCCGGGAAAAGAAAATGCGGCGTGAAGCGTCATCTTATTT GACGTCTTGCGGCTTGGCCTTGCGGAGGTTTGTGCAGTGA
Upstream 100 bases:
>100_bases AAATGAGAAAAATCCTTACAGCACAAAGAGCTTACTGCTACTATTCAAGTGATTTCTTAAGTATGCAGGGCTACATATTA GCCGTCATTTGGGGACCGCC
Downstream 100 bases:
>100_bases TTCTGATCAATCTGCTCCCGCACCGGGAGGCTGCGCGCAAACGCAGGCGCGAGGTGTTTTATGCGACCTTGGGCGTTGCC GCGCTGGCGGGTGTGCTGAT
Product: type IV pilus assembly protein PilM
Products: NA
Alternate protein names: Type IV Pilus Biogenesis Protein PilM; Tfp Pilus Assembly Protein ATPase PilM; Type 4 Fimbrial Biogenesis Protein PilM; Fimbrial Assembly Protein PilM; Tfp Pilus Assembly Protein; Fimbrial Assembly Membrane Protein; Type Iv Pilus Assembly Protein Pilm; Type IV Pili Biogenesis Protein PilM; Tfp Pilus Assembly Protein ATPase PilM-Like Protein; Type IV Fimbrial Biogenesis Protein PilM; Fimbrial Assembly Protein; Type IV Pilus Assembly Protein; Response Regulator Receiver Domain Protein; Response Regulator Receiver Domain-Containing Protein; Fimbrial Assembly Family Protein; Protein FtsA; PilM Type IV Pilus Assembly Protein; Tfp Pilus Assembly Protein ATPase PilM-Like Protein Protein; Pili Assembly Protein PilM; Type IV Pilus Biogenesis Protein TapM; Type IV Pilus Assembly Protein ATPase PilM; Type 4 Fimbrial Biogenesis Protein; Pili Assembly Protein; Competence Protein PilM; Type IV Pilus Biogenesis ATPase PilM
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MISLGSLFNSQEPALLGLDISSSSVKLVELSRDKAGNLVLDRCAIEPLERGWITDGNVEKFDEVAEAVRRLVKKSGTRTK NVAMALPASAVITKKIILPGGLSDSELELQVETEANQYIPFSLDEVSLDFCVVGPSATSSGDVEVLIAASRKEKVQDRQG LAEAAGLKPIVIDVESYASRLATARLIESLPNKGVDTLVALFEVGALTTSMQVIKNDEVLYERDQAFGGAQLTQLIVRQY GFSSEEAESKKRSGDLPEDYESGVLKPFVESMAQEIGRALQFFFTSTPHNKVDYVMLAGGSSALPGLNDAVTQQTSFACL LANPFEGMELGSDVREKKMRREASSYLTSCGLALRRFVQ
Sequences:
>Translated_359_residues MISLGSLFNSQEPALLGLDISSSSVKLVELSRDKAGNLVLDRCAIEPLERGWITDGNVEKFDEVAEAVRRLVKKSGTRTK NVAMALPASAVITKKIILPGGLSDSELELQVETEANQYIPFSLDEVSLDFCVVGPSATSSGDVEVLIAASRKEKVQDRQG LAEAAGLKPIVIDVESYASRLATARLIESLPNKGVDTLVALFEVGALTTSMQVIKNDEVLYERDQAFGGAQLTQLIVRQY GFSSEEAESKKRSGDLPEDYESGVLKPFVESMAQEIGRALQFFFTSTPHNKVDYVMLAGGSSALPGLNDAVTQQTSFACL LANPFEGMELGSDVREKKMRREASSYLTSCGLALRRFVQ >Mature_359_residues MISLGSLFNSQEPALLGLDISSSSVKLVELSRDKAGNLVLDRCAIEPLERGWITDGNVEKFDEVAEAVRRLVKKSGTRTK NVAMALPASAVITKKIILPGGLSDSELELQVETEANQYIPFSLDEVSLDFCVVGPSATSSGDVEVLIAASRKEKVQDRQG LAEAAGLKPIVIDVESYASRLATARLIESLPNKGVDTLVALFEVGALTTSMQVIKNDEVLYERDQAFGGAQLTQLIVRQY GFSSEEAESKKRSGDLPEDYESGVLKPFVESMAQEIGRALQFFFTSTPHNKVDYVMLAGGSSALPGLNDAVTQQTSFACL LANPFEGMELGSDVREKKMRREASSYLTSCGLALRRFVQ
Specific function: Ethanolamine utilization. [C]
COG id: COG4972
COG function: function code NU; Tfp pilus assembly protein, ATPase PilM
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38898; Mature: 38898
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS01036 HSP70_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISLGSLFNSQEPALLGLDISSSSVKLVELSRDKAGNLVLDRCAIEPLERGWITDGNVEK CCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCEEHHHHHHHHHHCCCCCCCCHHH FDEVAEAVRRLVKKSGTRTKNVAMALPASAVITKKIILPGGLSDSELELQVETEANQYIP HHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHEEECCCCCCCEEEEEEECCCCCCCC FSLDEVSLDFCVVGPSATSSGDVEVLIAASRKEKVQDRQGLAEAAGLKPIVIDVESYASR CCCCCCCEEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHH LATARLIESLPNKGVDTLVALFEVGALTTSMQVIKNDEVLYERDQAFGGAQLTQLIVRQY HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHH GFSSEEAESKKRSGDLPEDYESGVLKPFVESMAQEIGRALQFFFTSTPHNKVDYVMLAGG CCCCHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC SSALPGLNDAVTQQTSFACLLANPFEGMELGSDVREKKMRREASSYLTSCGLALRRFVQ CCCCCCCCHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MISLGSLFNSQEPALLGLDISSSSVKLVELSRDKAGNLVLDRCAIEPLERGWITDGNVEK CCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCEEHHHHHHHHHHCCCCCCCCHHH FDEVAEAVRRLVKKSGTRTKNVAMALPASAVITKKIILPGGLSDSELELQVETEANQYIP HHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHEEECCCCCCCEEEEEEECCCCCCCC FSLDEVSLDFCVVGPSATSSGDVEVLIAASRKEKVQDRQGLAEAAGLKPIVIDVESYASR CCCCCCCEEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHH LATARLIESLPNKGVDTLVALFEVGALTTSMQVIKNDEVLYERDQAFGGAQLTQLIVRQY HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHH GFSSEEAESKKRSGDLPEDYESGVLKPFVESMAQEIGRALQFFFTSTPHNKVDYVMLAGG CCCCHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC SSALPGLNDAVTQQTSFACLLANPFEGMELGSDVREKKMRREASSYLTSCGLALRRFVQ CCCCCCCCHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA