Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is cyaY

Identifier: 91786681

GI number: 91786681

Start: 800764

End: 801114

Strand: Direct

Name: cyaY

Synonym: Bpro_0779

Alternate gene names: 91786681

Gene position: 800764-801114 (Clockwise)

Preceding gene: 91786680

Following gene: 91786683

Centisome position: 15.4

GC content: 55.84

Gene sequence:

>351_bases
ATGACGGACCTTGAATACCAGGACCTGGCCGAGAGCGCGCTCACGGCAATAGAGACTGCCTGCGACCGGATCAATGATGA
AACCGACGCTGACATTGACAACCAGCGTACCGGCGGCATGATCACGCTGACATTTTCAAACCGCAGCCAGATCATCATCA
ACCTGCAAAAACCGCTGCAGGAAATATGGATGGCCGCCAAGGCGGGTGGTTTCCATTACAAGTTCCGTGGCAATCAATGG
CTGGACACCAAGGATTCCAGCGAGTTCTTCACCGGTTTGTCACGTTACGCCAGCGAGCAGGCGGGTCAGCCGCTGGTGTT
CAATGCACCTGTTCCGGTGACCGGCAAGTAG

Upstream 100 bases:

>100_bases
CAACCACGACGGCAACAAGGCCATGCCTGGAAACAAAAGCCCGAAGGCGGCCTAAAATTTGAAGCCAGGAATGATGTGAA
GAAACCATGATGGGATTGTA

Downstream 100 bases:

>100_bases
GCCTTCGGGTAGCGAGGAAGGTCGAATCCGCGCCGGTGCCGGCAGCGGGAGTCAACTGTGACGCCGCAATTTTTGTCCGT
CAGTTCTTGAACAGATCCAG

Product: frataxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MTDLEYQDLAESALTAIETACDRINDETDADIDNQRTGGMITLTFSNRSQIIINLQKPLQEIWMAAKAGGFHYKFRGNQW
LDTKDSSEFFTGLSRYASEQAGQPLVFNAPVPVTGK

Sequences:

>Translated_116_residues
MTDLEYQDLAESALTAIETACDRINDETDADIDNQRTGGMITLTFSNRSQIIINLQKPLQEIWMAAKAGGFHYKFRGNQW
LDTKDSSEFFTGLSRYASEQAGQPLVFNAPVPVTGK
>Mature_115_residues
TDLEYQDLAESALTAIETACDRINDETDADIDNQRTGGMITLTFSNRSQIIINLQKPLQEIWMAAKAGGFHYKFRGNQWL
DTKDSSEFFTGLSRYASEQAGQPLVFNAPVPVTGK

Specific function: Not Known; Its Knock Out Does Not Affect Cellular Iron Content. [C]

COG id: COG1965

COG function: function code P; Protein implicated in iron transport, frataxin homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the frataxin family

Homologues:

Organism=Escherichia coli, GI1790239, Length=108, Percent_Identity=35.1851851851852, Blast_Score=75, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CYAY_POLSJ (Q12FF7)

Other databases:

- EMBL:   CP000316
- RefSeq:   YP_547633.1
- ProteinModelPortal:   Q12FF7
- SMR:   Q12FF7
- STRING:   Q12FF7
- GeneID:   4011161
- GenomeReviews:   CP000316_GR
- KEGG:   pol:Bpro_0779
- NMPDR:   fig|296591.1.peg.3155
- eggNOG:   COG1965
- HOGENOM:   HBG687517
- OMA:   GGFHFRR
- PhylomeDB:   Q12FF7
- ProtClustDB:   CLSK951636
- BioCyc:   PSP296591:BPRO_0779-MONOMER
- HAMAP:   MF_00142
- InterPro:   IPR002908
- InterPro:   IPR020895
- Gene3D:   G3DSA:3.30.920.10
- TIGRFAMs:   TIGR03421

Pfam domain/function: PF01491 Frataxin_Cyay; SSF55387 Frataxin_like

EC number: NA

Molecular weight: Translated: 12937; Mature: 12805

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: PS01344 FRATAXIN_1; PS50810 FRATAXIN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLEYQDLAESALTAIETACDRINDETDADIDNQRTGGMITLTFSNRSQIIINLQKPLQ
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEHHHHHH
EIWMAAKAGGFHYKFRGNQWLDTKDSSEFFTGLSRYASEQAGQPLVFNAPVPVTGK
HHHHHHCCCCEEEEECCCEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCC
>Mature Secondary Structure 
TDLEYQDLAESALTAIETACDRINDETDADIDNQRTGGMITLTFSNRSQIIINLQKPLQ
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEHHHHHH
EIWMAAKAGGFHYKFRGNQWLDTKDSSEFFTGLSRYASEQAGQPLVFNAPVPVTGK
HHHHHHCCCCEEEEECCCEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA