Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256491
Identifier: 89256491
GI number: 89256491
Start: 1112317
End: 1112811
Strand: Reverse
Name: 89256491
Synonym: FTL_1169
Alternate gene names: NA
Gene position: 1112811-1112317 (Counterclockwise)
Preceding gene: 89256492
Following gene: 89256490
Centisome position: 58.69
GC content: 30.1
Gene sequence:
>495_bases ATGTCAAAAGCAGACCATATTTTCAACTTAGAAGAGCAAGGCTTGCTCATAGATATCAAAGATGATTCAAAAGGCTGCAC TACGAAACTAGAGTCCTCTGGAAAAATCACTCATAATGCAACTGAATCGATAGAGTCAAGCGCTGATAAACAAATAATTG AAAATGTCAAAGACTCAAAAATATCAATAACTGAAAAAGAAATTTTGTTAGCTACTAAGAAATCAAGCATTATGCTTAGT GAAGATAAAATTGTCATAAAAATAGGTAATTCTTTAATTATACTTGATGATTCAAATATTTCGCTAGAGTCTGCAACTAT TAATATAAAAAGCTCTGCTAATATAAATATTCAAGCATCACAGAACATAGATATAAAAAGTCTAAATAATAGTATCAAAG CAGATGTAAACCTTAATGCTGAAGGGTTAGATGTAAATATTAAAGGAAGTGTAACAGCAAGTATAAAAGGTTCTACAGCA ACAATGGTTGGATAA
Upstream 100 bases:
>100_bases AAAAACTGAAAACTGGAAATACATAATAAGTTCAGATTCTGTAAATAAATTTACTATAAAAAATGATAGTAGCATAGAAA AAGATTAAGGGGATATTCTT
Downstream 100 bases:
>100_bases TAATATGAATAATAATATTGATAAATGGTTTGAGAATTTATTTAGCAATATCCATTTATATTATAAACAAGAGCAATCTT ATAAAATAAGTAAGCTTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MSKADHIFNLEEQGLLIDIKDDSKGCTTKLESSGKITHNATESIESSADKQIIENVKDSKISITEKEILLATKKSSIMLS EDKIVIKIGNSLIILDDSNISLESATINIKSSANINIQASQNIDIKSLNNSIKADVNLNAEGLDVNIKGSVTASIKGSTA TMVG
Sequences:
>Translated_164_residues MSKADHIFNLEEQGLLIDIKDDSKGCTTKLESSGKITHNATESIESSADKQIIENVKDSKISITEKEILLATKKSSIMLS EDKIVIKIGNSLIILDDSNISLESATINIKSSANINIQASQNIDIKSLNNSIKADVNLNAEGLDVNIKGSVTASIKGSTA TMVG >Mature_163_residues SKADHIFNLEEQGLLIDIKDDSKGCTTKLESSGKITHNATESIESSADKQIIENVKDSKISITEKEILLATKKSSIMLSE DKIVIKIGNSLIILDDSNISLESATINIKSSANINIQASQNIDIKSLNNSIKADVNLNAEGLDVNIKGSVTASIKGSTAT MVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17502; Mature: 17371
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKADHIFNLEEQGLLIDIKDDSKGCTTKLESSGKITHNATESIESSADKQIIENVKDSK CCCCCCEECCCCCCEEEEECCCCCCCEEEECCCCCEEECCHHHHHHHHHHHHHHHCCCCE ISITEKEILLATKKSSIMLSEDKIVIKIGNSLIILDDSNISLESATINIKSSANINIQAS EEEEEEEEEEEECCCEEEEECCEEEEEECCEEEEEECCCCEEEEEEEEEECCCCEEEEEC QNIDIKSLNNSIKADVNLNAEGLDVNIKGSVTASIKGSTATMVG CCCEEEECCCCEEEEEECCCCCEEEEECCEEEEEECCCEEEECC >Mature Secondary Structure SKADHIFNLEEQGLLIDIKDDSKGCTTKLESSGKITHNATESIESSADKQIIENVKDSK CCCCCEECCCCCCEEEEECCCCCCCEEEECCCCCEEECCHHHHHHHHHHHHHHHCCCCE ISITEKEILLATKKSSIMLSEDKIVIKIGNSLIILDDSNISLESATINIKSSANINIQAS EEEEEEEEEEEECCCEEEEECCEEEEEECCEEEEEECCCCEEEEEEEEEECCCCEEEEEC QNIDIKSLNNSIKADVNLNAEGLDVNIKGSVTASIKGSTATMVG CCCEEEECCCCEEEEEECCCCCEEEEECCEEEEEECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA