Definition Francisella tularensis subsp. holarctica LVS chromosome, complete genome.
Accession NC_007880
Length 1,895,994

Click here to switch to the map view.

The map label for this gene is 89256492

Identifier: 89256492

GI number: 89256492

Start: 1112824

End: 1113201

Strand: Reverse

Name: 89256492

Synonym: FTL_1170

Alternate gene names: NA

Gene position: 1113201-1112824 (Counterclockwise)

Preceding gene: 89256493

Following gene: 89256491

Centisome position: 58.71

GC content: 23.81

Gene sequence:

>378_bases
ATGTACAATAAATTATTGAAAAATCTTTGTTTAGTATTATCCACAATCATAGGGCTTAGCAGTTGTATTAGTGATGGTTT
GTATATCAACAACAATATTCCTAAGACAAAAATAGTTCTAGAATCTAAACCTGATAAAAATATTTTCTACTCAGATAACT
ATCAATCTATTTCTCAAAGAATATATGATGATAATGTAAAAGTATTAAATCTTAAAACAGGAAAGAATGAATTTCCATTA
GATAAAGATATCAAGGATTATGCCTTGTATTTTATACTTCCTGAAAATAAAAAAACTGAAAACTGGAAATACATAATAAG
TTCAGATTCTGTAAATAAATTTACTATAAAAAATGATAGTAGCATAGAAAAAGATTAA

Upstream 100 bases:

>100_bases
ACCTGGATAATCAAGCACAAAGGTAAAAAATATCCTTTAAGCTTCAAAATAGAATCAAAATTCTTACAAGTATTAGGATG
GCAAAAACAAGGAGAAGTCA

Downstream 100 bases:

>100_bases
GGGGATATTCTTATGTCAAAAGCAGACCATATTTTCAACTTAGAAGAGCAAGGCTTGCTCATAGATATCAAAGATGATTC
AAAAGGCTGCACTACGAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MYNKLLKNLCLVLSTIIGLSSCISDGLYINNNIPKTKIVLESKPDKNIFYSDNYQSISQRIYDDNVKVLNLKTGKNEFPL
DKDIKDYALYFILPENKKTENWKYIISSDSVNKFTIKNDSSIEKD

Sequences:

>Translated_125_residues
MYNKLLKNLCLVLSTIIGLSSCISDGLYINNNIPKTKIVLESKPDKNIFYSDNYQSISQRIYDDNVKVLNLKTGKNEFPL
DKDIKDYALYFILPENKKTENWKYIISSDSVNKFTIKNDSSIEKD
>Mature_125_residues
MYNKLLKNLCLVLSTIIGLSSCISDGLYINNNIPKTKIVLESKPDKNIFYSDNYQSISQRIYDDNVKVLNLKTGKNEFPL
DKDIKDYALYFILPENKKTENWKYIISSDSVNKFTIKNDSSIEKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14469; Mature: 14469

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNKLLKNLCLVLSTIIGLSSCISDGLYINNNIPKTKIVLESKPDKNIFYSDNYQSISQR
CHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEECCCCCCCEECCCHHHHHHH
IYDDNVKVLNLKTGKNEFPLDKDIKDYALYFILPENKKTENWKYIISSDSVNKFTIKNDS
HCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCEEEECCCC
SIEKD
CCCCC
>Mature Secondary Structure
MYNKLLKNLCLVLSTIIGLSSCISDGLYINNNIPKTKIVLESKPDKNIFYSDNYQSISQR
CHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEECCCCCCCEECCCHHHHHHH
IYDDNVKVLNLKTGKNEFPLDKDIKDYALYFILPENKKTENWKYIISSDSVNKFTIKNDS
HCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCEEEECCCC
SIEKD
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA