Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256490
Identifier: 89256490
GI number: 89256490
Start: 1110648
End: 1112312
Strand: Reverse
Name: 89256490
Synonym: FTL_1168
Alternate gene names: NA
Gene position: 1112312-1110648 (Counterclockwise)
Preceding gene: 89256491
Following gene: 89256489
Centisome position: 58.67
GC content: 23.84
Gene sequence:
>1665_bases ATGAATAATAATATTGATAAATGGTTTGAGAATTTATTTAGCAATATCCATTTATATTATAAACAAGAGCAATCTTATAA AATAAGTAAGCTTAATGAGTGCATCACTAACGTAATCAAATTTATAAATATAAAAGATTATAGAAAAGCTGACATCTATA ATCTGACCTATGTTATTGAAGATGTAAGATACTCAACGAATCTAATTTTATCTGACTCTGCAATTAAATTTAATGATTTA ATATTAAAAAAATTAGATAACCTCTTAGATTGTACTGATATTAACTATTTTACTAGCCTTATGAAGAATTTAAAGGTTCT TTTAGAAAAGTATAAACTAGTAATAGAGAAAGATATATCGAATAGAATAGAACTTATAAAAACTAAGCAGATCGATAAAC TAGAATCTATATTTTTAGACTATATAAACAACCATAGTATCAGCGCTTATGATGATAGTCTTGTAAAATTATATGTAAAA ACTATACAAAATCCCAATTCCATTGAGGCTATAGATGAGTATAAATCATATTTCGATACGCTCAAAATATTTATAAAAGA TCATAAAAATATAGTTAGTTTTATTCCCTTTAGAAAAAATCCTATTTTAAGCTTATTGAAATTAGCTTATTTAATTAGAA ATGGTTTATATAAAACAGATCGTCTTTTAGCTAGCGATATTATTCTTTTAAGAGCTTTATATTCTATAAATAAAGATACA TATAAATTAAGTCTTATAAATGAAAAAACAGATACTAACCTATCAATAGTTTCGCTGACGTCACTACAAGCTAAGCCCTC AGAAAACTTAAAAAAAACTATTGCTTTTATAGATTTACAGATATTTGCTATATCTCAGTATTTTGATGATTTCCCTTTAC AGGATATTTTTTTTCAAAAAAAATCACAAATAGACATTTTCAAGTCAGAATCACTAGAACAACTTATTTTCAGTTTAAAA AATATTTCAAATATAATGTTTGATGAAGAAACACTATATAAAAAAATCCATATAAAAAATCAACTCTACAAAAACCTTTT TTTAAATAATCACAATAGTTTGATAGAAGATATTATAGAAAAATCTCCAGCAAACTTATTAACAAAGTTAGCTAATAAAT ACTTCCAAATACTGCTAGACATAGCAACAATAATAAATATTCAATTAGTAAATAATAATTTAAAGCTTATTTATCCTTTC TTAGAGTTTGAAAAATATTTTAATCAAGTAACTTTAGAAGTATCAAAAAAATCACAGTTTAATCAAGAAAAGCTAGAAAA GAATATTCTAAATATTATCAGGATATATCCTTTACTAAATCAAAACTACCAATTATTAAAGAATATGGAACAAAAAATTA TTGATGATAAAAATAGTATAGAATCAAACGATATATATAAGCTTAGTGTTTTTGTAAATAGCAAAAGTTTTTCTACCTAT AAAGAAATCAGAACCTTAACCTCAAATGACCATAAAGATATTAACATACACAAATCTTTAGTAAAACTGAACAAAAATAT TTGTAATGCCAAACATAAGAATGCCGCTGAAACAGCTAAAGAGCTAACGATGGTTCTTTTAAGTAAATCTTACTATATGA ATCCAACTTTGATAGGAGTATATAATCTACCGCCAATTTCAAATAGTTTTTTTTTTGGTGCTTAA
Upstream 100 bases:
>100_bases GCAGATGTAAACCTTAATGCTGAAGGGTTAGATGTAAATATTAAAGGAAGTGTAACAGCAAGTATAAAAGGTTCTACAGC AACAATGGTTGGATAATAAT
Downstream 100 bases:
>100_bases AGAGATTACAAATAATCCGATCATTGATAGTATAAAAAGCAAGCAAGAAGCTTATTGGAAAATTTAAATGTTAAATATTA TAAATGACTCCTTAAAACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 554; Mature: 554
Protein sequence:
>554_residues MNNNIDKWFENLFSNIHLYYKQEQSYKISKLNECITNVIKFINIKDYRKADIYNLTYVIEDVRYSTNLILSDSAIKFNDL ILKKLDNLLDCTDINYFTSLMKNLKVLLEKYKLVIEKDISNRIELIKTKQIDKLESIFLDYINNHSISAYDDSLVKLYVK TIQNPNSIEAIDEYKSYFDTLKIFIKDHKNIVSFIPFRKNPILSLLKLAYLIRNGLYKTDRLLASDIILLRALYSINKDT YKLSLINEKTDTNLSIVSLTSLQAKPSENLKKTIAFIDLQIFAISQYFDDFPLQDIFFQKKSQIDIFKSESLEQLIFSLK NISNIMFDEETLYKKIHIKNQLYKNLFLNNHNSLIEDIIEKSPANLLTKLANKYFQILLDIATIINIQLVNNNLKLIYPF LEFEKYFNQVTLEVSKKSQFNQEKLEKNILNIIRIYPLLNQNYQLLKNMEQKIIDDKNSIESNDIYKLSVFVNSKSFSTY KEIRTLTSNDHKDINIHKSLVKLNKNICNAKHKNAAETAKELTMVLLSKSYYMNPTLIGVYNLPPISNSFFFGA
Sequences:
>Translated_554_residues MNNNIDKWFENLFSNIHLYYKQEQSYKISKLNECITNVIKFINIKDYRKADIYNLTYVIEDVRYSTNLILSDSAIKFNDL ILKKLDNLLDCTDINYFTSLMKNLKVLLEKYKLVIEKDISNRIELIKTKQIDKLESIFLDYINNHSISAYDDSLVKLYVK TIQNPNSIEAIDEYKSYFDTLKIFIKDHKNIVSFIPFRKNPILSLLKLAYLIRNGLYKTDRLLASDIILLRALYSINKDT YKLSLINEKTDTNLSIVSLTSLQAKPSENLKKTIAFIDLQIFAISQYFDDFPLQDIFFQKKSQIDIFKSESLEQLIFSLK NISNIMFDEETLYKKIHIKNQLYKNLFLNNHNSLIEDIIEKSPANLLTKLANKYFQILLDIATIINIQLVNNNLKLIYPF LEFEKYFNQVTLEVSKKSQFNQEKLEKNILNIIRIYPLLNQNYQLLKNMEQKIIDDKNSIESNDIYKLSVFVNSKSFSTY KEIRTLTSNDHKDINIHKSLVKLNKNICNAKHKNAAETAKELTMVLLSKSYYMNPTLIGVYNLPPISNSFFFGA >Mature_554_residues MNNNIDKWFENLFSNIHLYYKQEQSYKISKLNECITNVIKFINIKDYRKADIYNLTYVIEDVRYSTNLILSDSAIKFNDL ILKKLDNLLDCTDINYFTSLMKNLKVLLEKYKLVIEKDISNRIELIKTKQIDKLESIFLDYINNHSISAYDDSLVKLYVK TIQNPNSIEAIDEYKSYFDTLKIFIKDHKNIVSFIPFRKNPILSLLKLAYLIRNGLYKTDRLLASDIILLRALYSINKDT YKLSLINEKTDTNLSIVSLTSLQAKPSENLKKTIAFIDLQIFAISQYFDDFPLQDIFFQKKSQIDIFKSESLEQLIFSLK NISNIMFDEETLYKKIHIKNQLYKNLFLNNHNSLIEDIIEKSPANLLTKLANKYFQILLDIATIINIQLVNNNLKLIYPF LEFEKYFNQVTLEVSKKSQFNQEKLEKNILNIIRIYPLLNQNYQLLKNMEQKIIDDKNSIESNDIYKLSVFVNSKSFSTY KEIRTLTSNDHKDINIHKSLVKLNKNICNAKHKNAAETAKELTMVLLSKSYYMNPTLIGVYNLPPISNSFFFGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65034; Mature: 65034
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNNIDKWFENLFSNIHLYYKQEQSYKISKLNECITNVIKFINIKDYRKADIYNLTYVIE CCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHH DVRYSTNLILSDSAIKFNDLILKKLDNLLDCTDINYFTSLMKNLKVLLEKYKLVIEKDIS HHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NRIELIKTKQIDKLESIFLDYINNHSISAYDDSLVKLYVKTIQNPNSIEAIDEYKSYFDT HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LKIFIKDHKNIVSFIPFRKNPILSLLKLAYLIRNGLYKTDRLLASDIILLRALYSINKDT HHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC YKLSLINEKTDTNLSIVSLTSLQAKPSENLKKTIAFIDLQIFAISQYFDDFPLQDIFFQK EEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC KSQIDIFKSESLEQLIFSLKNISNIMFDEETLYKKIHIKNQLYKNLFLNNHNSLIEDIIE CCCCHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH KSPANLLTKLANKYFQILLDIATIINIQLVNNNLKLIYPFLEFEKYFNQVTLEVSKKSQF CCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEHHHHHHHHHHHEEEEEHHHHCC NQEKLEKNILNIIRIYPLLNQNYQLLKNMEQKIIDDKNSIESNDIYKLSVFVNSKSFSTY CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCHHHH KEIRTLTSNDHKDINIHKSLVKLNKNICNAKHKNAAETAKELTMVLLSKSYYMNPTLIGV HHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEE YNLPPISNSFFFGA EECCCCCCCCCCCC >Mature Secondary Structure MNNNIDKWFENLFSNIHLYYKQEQSYKISKLNECITNVIKFINIKDYRKADIYNLTYVIE CCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHH DVRYSTNLILSDSAIKFNDLILKKLDNLLDCTDINYFTSLMKNLKVLLEKYKLVIEKDIS HHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NRIELIKTKQIDKLESIFLDYINNHSISAYDDSLVKLYVKTIQNPNSIEAIDEYKSYFDT HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LKIFIKDHKNIVSFIPFRKNPILSLLKLAYLIRNGLYKTDRLLASDIILLRALYSINKDT HHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC YKLSLINEKTDTNLSIVSLTSLQAKPSENLKKTIAFIDLQIFAISQYFDDFPLQDIFFQK EEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC KSQIDIFKSESLEQLIFSLKNISNIMFDEETLYKKIHIKNQLYKNLFLNNHNSLIEDIIE CCCCHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH KSPANLLTKLANKYFQILLDIATIINIQLVNNNLKLIYPFLEFEKYFNQVTLEVSKKSQF CCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEHHHHHHHHHHHEEEEEHHHHCC NQEKLEKNILNIIRIYPLLNQNYQLLKNMEQKIIDDKNSIESNDIYKLSVFVNSKSFSTY CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCHHHH KEIRTLTSNDHKDINIHKSLVKLNKNICNAKHKNAAETAKELTMVLLSKSYYMNPTLIGV HHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEE YNLPPISNSFFFGA EECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA