Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256416
Identifier: 89256416
GI number: 89256416
Start: 1033290
End: 1033622
Strand: Direct
Name: 89256416
Synonym: FTL_1082
Alternate gene names: NA
Gene position: 1033290-1033622 (Clockwise)
Preceding gene: 89256415
Following gene: 89256420
Centisome position: 54.5
GC content: 28.23
Gene sequence:
>333_bases TTGATACAGGCACATCTATTTACAATATCTAATAATTATAGTGAAAGTTTAGGTTTGAAAAGTACTTCTAAAAAAACAAT TCAGGCAACAGATGGAACTCTTACAATTGCTGATGCTAATATTTCTAGCCTAATAATTAACCCTTTGAATATTTTTTTTC AAAAAAAAGTTAAGTTAGATAATATAAGCGCAACTTCAGCAAATATAGAACCAATGAGTAAGTTTTTAGGAGTGCTTTGT GTTTTGGGCTACAAGGAATTAAGTCGTATGAACTCTATATACGATATTGCAGCAGCAAGAATTTATATAAGAAATAATCA TAAACGATTATAA
Upstream 100 bases:
>100_bases AATAATAGTAACTATTTGTTAATCAATTTAACAAAATTAATTTCGCAGTATCAAATAATACCTATAACGGTCAATAATAA TTCACCAATAAATTGCTTAG
Downstream 100 bases:
>100_bases TTATTAGCTAGTTTCTTATACCATATAAATATAATTAGTGCCGCTGAAAGCTTCATTATACATGGTAAAACACAGTATAC TATCCTTAAAATCATATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MIQAHLFTISNNYSESLGLKSTSKKTIQATDGTLTIADANISSLIINPLNIFFQKKVKLDNISATSANIEPMSKFLGVLC VLGYKELSRMNSIYDIAAARIYIRNNHKRL
Sequences:
>Translated_110_residues MIQAHLFTISNNYSESLGLKSTSKKTIQATDGTLTIADANISSLIINPLNIFFQKKVKLDNISATSANIEPMSKFLGVLC VLGYKELSRMNSIYDIAAARIYIRNNHKRL >Mature_110_residues MIQAHLFTISNNYSESLGLKSTSKKTIQATDGTLTIADANISSLIINPLNIFFQKKVKLDNISATSANIEPMSKFLGVLC VLGYKELSRMNSIYDIAAARIYIRNNHKRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12236; Mature: 12236
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQAHLFTISNNYSESLGLKSTSKKTIQATDGTLTIADANISSLIINPLNIFFQKKVKLD CCEEEEEEEECCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCEEECHHHHEEECCCCCC NISATSANIEPMSKFLGVLCVLGYKELSRMNSIYDIAAARIYIRNNHKRL CCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHEEEEEECCCCCC >Mature Secondary Structure MIQAHLFTISNNYSESLGLKSTSKKTIQATDGTLTIADANISSLIINPLNIFFQKKVKLD CCEEEEEEEECCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCEEECHHHHEEECCCCCC NISATSANIEPMSKFLGVLCVLGYKELSRMNSIYDIAAARIYIRNNHKRL CCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA