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The map label for this gene is dtpB [H]

Identifier: 89256420

GI number: 89256420

Start: 1035243

End: 1035866

Strand: Direct

Name: dtpB [H]

Synonym: FTL_1086

Alternate gene names: 89256420

Gene position: 1035243-1035866 (Clockwise)

Preceding gene: 89256416

Following gene: 89256425

Centisome position: 54.6

GC content: 29.65

Gene sequence:

>624_bases
ATGTTCTTGGGAGCAGTTTTTCTTTTAGTTGGGTATTTTAGCCTAGCTTTAAGTCCTTATTTTGTAAATATAGACAATTA
TGTATATATAAGTTTAGCTTGTATTATTGTTGGATCTTCACTATTTAAGCCTGCTCCGACGAACTTAATTTCTAGAATAT
ATACAGATAAACTTAAACTTGACTCTGTTTATACATATTTTTATATGTCGATAAATATGAGTTCTTTATCAGCATCCCTT
CTAATACCTGTTTTAGCAACAAAATATGGTTACACTGCTGCGTATGGAGTGTGTTCTGTAGGTTTTGCAATAGGTATATT
AAATAGTCTATTGAGTTACGCTAGTATCAAAGATATCGGTAATGAAGTTGATTTTAGAAATATGGGATATCCAAGAACTA
TTCTTATAGTGTCAGTTTTTATTATCGTAATAATTGGACTTAGTGTAATACTACAAACTAATGATACGATTAATTATATT
TTATGGTTTGGTGCTGGTTTAATATTTGGAGTATTTGCTTTTCAAATCTATGTTGAGAAAGATCCTAGTTCAAGAAAAAA
GATAGTAGCAGCGATTATTTTATTAGGTTCTGTGCACAAAAATAGTTTCTCAGTAGCCAAATAA

Upstream 100 bases:

>100_bases
GTTAGCGGTACTTTTATTTGGAGGATTTGCTTCATTAAGTTATGTTTTTAATGCTATTGGTGGTTATGTTGCTGATAAAG
TTTTTGGTATTAAAAGAACA

Downstream 100 bases:

>100_bases
AAGTACAAGCTAATTTAATCATTCCTATATATGCTGAAATGGTTTTATCAAATCTAGAGAATACTCTTCTAAAATGCTTA
ATTTTAGAAAAGAAATTCTC

Product: proton-dependent oligopeptide transporter (POT) family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MFLGAVFLLVGYFSLALSPYFVNIDNYVYISLACIIVGSSLFKPAPTNLISRIYTDKLKLDSVYTYFYMSINMSSLSASL
LIPVLATKYGYTAAYGVCSVGFAIGILNSLLSYASIKDIGNEVDFRNMGYPRTILIVSVFIIVIIGLSVILQTNDTINYI
LWFGAGLIFGVFAFQIYVEKDPSSRKKIVAAIILLGSVHKNSFSVAK

Sequences:

>Translated_207_residues
MFLGAVFLLVGYFSLALSPYFVNIDNYVYISLACIIVGSSLFKPAPTNLISRIYTDKLKLDSVYTYFYMSINMSSLSASL
LIPVLATKYGYTAAYGVCSVGFAIGILNSLLSYASIKDIGNEVDFRNMGYPRTILIVSVFIIVIIGLSVILQTNDTINYI
LWFGAGLIFGVFAFQIYVEKDPSSRKKIVAAIILLGSVHKNSFSVAK
>Mature_207_residues
MFLGAVFLLVGYFSLALSPYFVNIDNYVYISLACIIVGSSLFKPAPTNLISRIYTDKLKLDSVYTYFYMSINMSSLSASL
LIPVLATKYGYTAAYGVCSVGFAIGILNSLLSYASIKDIGNEVDFRNMGYPRTILIVSVFIIVIIGLSVILQTNDTINYI
LWFGAGLIFGVFAFQIYVEKDPSSRKKIVAAIILLGSVHKNSFSVAK

Specific function: Proton-dependent permease that transports di- and tripeptides. Has a clear preference for dipeptides and tripeptides composed of L-amino acids, and discriminates dipeptides on the basis of the position of charges within the substrate [H]

COG id: COG3104

COG function: function code E; Dipeptide/tripeptide permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PTR2/POT transporter (TC 2.A.17) family. DtpB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789911, Length=194, Percent_Identity=31.9587628865979, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1787922, Length=201, Percent_Identity=33.3333333333333, Blast_Score=98, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016196
- InterPro:   IPR000109
- InterPro:   IPR005279
- InterPro:   IPR018456 [H]

Pfam domain/function: PF00854 PTR2 [H]

EC number: NA

Molecular weight: Translated: 22749; Mature: 22749

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLGAVFLLVGYFSLALSPYFVNIDNYVYISLACIIVGSSLFKPAPTNLISRIYTDKLKL
CHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
DSVYTYFYMSINMSSLSASLLIPVLATKYGYTAAYGVCSVGFAIGILNSLLSYASIKDIG
HHEEEEEEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NEVDFRNMGYPRTILIVSVFIIVIIGLSVILQTNDTINYILWFGAGLIFGVFAFQIYVEK
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHEEEEC
DPSSRKKIVAAIILLGSVHKNSFSVAK
CCCHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MFLGAVFLLVGYFSLALSPYFVNIDNYVYISLACIIVGSSLFKPAPTNLISRIYTDKLKL
CHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
DSVYTYFYMSINMSSLSASLLIPVLATKYGYTAAYGVCSVGFAIGILNSLLSYASIKDIG
HHEEEEEEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NEVDFRNMGYPRTILIVSVFIIVIIGLSVILQTNDTINYILWFGAGLIFGVFAFQIYVEK
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHEEEEC
DPSSRKKIVAAIILLGSVHKNSFSVAK
CCCHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]