Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256415
Identifier: 89256415
GI number: 89256415
Start: 1032902
End: 1033321
Strand: Direct
Name: 89256415
Synonym: FTL_1081
Alternate gene names: NA
Gene position: 1032902-1033321 (Clockwise)
Preceding gene: 89256412
Following gene: 89256416
Centisome position: 54.48
GC content: 25.24
Gene sequence:
>420_bases GTGCTTAATAAAAGACAAGATTCAAATTATTCATTAAACATGGCAGGACAGAAAAGTAAAAATCATAGCGTGATTTTAGA TGAGATAGAAATTGGCAATATACACTTAAATAATATAAAAGCTAGAATTACCACTCAACCAAAGAAAAAGCAATATCCAA TTATTGTAATAGGTTTAGATTTTTTAGAAAAATATAATGCAATATTTGATTTTTCTCGATCATACATATACCTAACAAAT AGAACAATAACACCTAAAGACCACTATTTAATTGGTCAAAAATTACAGAATAATAGTAACTATTTGTTAATCAATTTAAC AAAATTAATTTCGCAGTATCAAATAATACCTATAACGGTCAATAATAATTCACCAATAAATTGCTTAGTTGATACAGGCA CATCTATTTACAATATCTAA
Upstream 100 bases:
>100_bases ATAATTTGTTGCACCATATTTAATTGCTAAAGTAAATCAAAATAAAGCTTATATATTATTTGACTCTGGTTCTAAGGGAG TCAGTATATTTAACTCTTCT
Downstream 100 bases:
>100_bases TAATTATAGTGAAAGTTTAGGTTTGAAAAGTACTTCTAAAAAAACAATTCAGGCAACAGATGGAACTCTTACAATTGCTG ATGCTAATATTTCTAGCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MLNKRQDSNYSLNMAGQKSKNHSVILDEIEIGNIHLNNIKARITTQPKKKQYPIIVIGLDFLEKYNAIFDFSRSYIYLTN RTITPKDHYLIGQKLQNNSNYLLINLTKLISQYQIIPITVNNNSPINCLVDTGTSIYNI
Sequences:
>Translated_139_residues MLNKRQDSNYSLNMAGQKSKNHSVILDEIEIGNIHLNNIKARITTQPKKKQYPIIVIGLDFLEKYNAIFDFSRSYIYLTN RTITPKDHYLIGQKLQNNSNYLLINLTKLISQYQIIPITVNNNSPINCLVDTGTSIYNI >Mature_139_residues MLNKRQDSNYSLNMAGQKSKNHSVILDEIEIGNIHLNNIKARITTQPKKKQYPIIVIGLDFLEKYNAIFDFSRSYIYLTN RTITPKDHYLIGQKLQNNSNYLLINLTKLISQYQIIPITVNNNSPINCLVDTGTSIYNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16019; Mature: 16019
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNKRQDSNYSLNMAGQKSKNHSVILDEIEIGNIHLNNIKARITTQPKKKQYPIIVIGLD CCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCEEECCEEEEEEECCCCCCCCEEEEEHH FLEKYNAIFDFSRSYIYLTNRTITPKDHYLIGQKLQNNSNYLLINLTKLISQYQIIPITV HHHHHHHEEECCCCEEEEECCEECCCCCEEEEEEEECCCCEEEEEHHHHHCCEEEEEEEE NNNSPINCLVDTGTSIYNI CCCCCEEEEEECCCEEECC >Mature Secondary Structure MLNKRQDSNYSLNMAGQKSKNHSVILDEIEIGNIHLNNIKARITTQPKKKQYPIIVIGLD CCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCEEECCEEEEEEECCCCCCCCEEEEEHH FLEKYNAIFDFSRSYIYLTNRTITPKDHYLIGQKLQNNSNYLLINLTKLISQYQIIPITV HHHHHHHEEECCCCEEEEECCEECCCCCEEEEEEEECCCCEEEEEHHHHHCCEEEEEEEE NNNSPINCLVDTGTSIYNI CCCCCEEEEEECCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA