Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256287
Identifier: 89256287
GI number: 89256287
Start: 907235
End: 907576
Strand: Reverse
Name: 89256287
Synonym: FTL_0936
Alternate gene names: NA
Gene position: 907576-907235 (Counterclockwise)
Preceding gene: 89256289
Following gene: 89256286
Centisome position: 47.87
GC content: 34.5
Gene sequence:
>342_bases ATGTATGCTTATGATAATAGTGAAGTTCTTTTTAAGCCAACTCTAGCATCTAAGAAAATGTTTAGAGGCGACTTAGAAGG TGCAGTATCTTATTTTGTTGCAGGCAATGATAAATACCCTGAAGATAATGGTTTTGCTATCGGACCATGGGCAGATCTAG AATTTGAAAATGCCGGCTATATCGTTGAAGACAATATTGGTATAGTTATGGGTAACAAACATTTAACTCAAACTAATGGT AACAAAGTAGTTGCAAACTATACAATGGGTTTCAAACCTAATGCTAATGGTGAACTACAAATCGTACTTCATCATTCATC TTTACCGTATACTCCAGTATAA
Upstream 100 bases:
>100_bases ATAGATAAGGCATTAGCTAAGTGGAAAAATGGCTTATTAAAGATTTCCTTATAGGGAAGGAGGAGACTATAAGCAATTAG CTCACGATTTTATCAAAGAT
Downstream 100 bases:
>100_bases TTAATAGACAAAATAAAATTTTAAAATAATAGATAATGCCTACAAAAAAACAACAAAGTTGGACTTTCTTAACAAATCAT TCGCATGTGTTATGTCTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MYAYDNSEVLFKPTLASKKMFRGDLEGAVSYFVAGNDKYPEDNGFAIGPWADLEFENAGYIVEDNIGIVMGNKHLTQTNG NKVVANYTMGFKPNANGELQIVLHHSSLPYTPV
Sequences:
>Translated_113_residues MYAYDNSEVLFKPTLASKKMFRGDLEGAVSYFVAGNDKYPEDNGFAIGPWADLEFENAGYIVEDNIGIVMGNKHLTQTNG NKVVANYTMGFKPNANGELQIVLHHSSLPYTPV >Mature_113_residues MYAYDNSEVLFKPTLASKKMFRGDLEGAVSYFVAGNDKYPEDNGFAIGPWADLEFENAGYIVEDNIGIVMGNKHLTQTNG NKVVANYTMGFKPNANGELQIVLHHSSLPYTPV
Specific function: Unknown
COG id: COG4337
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12479; Mature: 12479
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYAYDNSEVLFKPTLASKKMFRGDLEGAVSYFVAGNDKYPEDNGFAIGPWADLEFENAGY CCEECCCCEEEECCCCCCHHHCCCCCCEEEEEEECCCCCCCCCCEEECCCCCCEECCCCE IVEDNIGIVMGNKHLTQTNGNKVVANYTMGFKPNANGELQIVLHHSSLPYTPV EEECCEEEEECCCEEEECCCCEEEEEEEECCCCCCCCEEEEEEECCCCCCCCC >Mature Secondary Structure MYAYDNSEVLFKPTLASKKMFRGDLEGAVSYFVAGNDKYPEDNGFAIGPWADLEFENAGY CCEECCCCEEEECCCCCCHHHCCCCCCEEEEEEECCCCCCCCCCEEECCCCCCEECCCCE IVEDNIGIVMGNKHLTQTNGNKVVANYTMGFKPNANGELQIVLHHSSLPYTPV EEECCEEEEECCCEEEECCCCEEEEEEEECCCCCCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA