Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256286
Identifier: 89256286
GI number: 89256286
Start: 906903
End: 907199
Strand: Reverse
Name: 89256286
Synonym: FTL_0935
Alternate gene names: NA
Gene position: 907199-906903 (Counterclockwise)
Preceding gene: 89256287
Following gene: 89256277
Centisome position: 47.85
GC content: 34.01
Gene sequence:
>297_bases ATGCCTACAAAAAAACAACAAAGTTGGACTTTCTTAACAAATCATTCGCATGTGTTATGTCTCATTAATAGTGACCCAAA CATCACTATTAGAGATATGGCTATCAAGGTTGGGATCACTGAACGAGCGGTCCTAAATATTCTAAGTGACCTAACCGAGA CAGCCTATCTAACTGTAACAAAGATTGGTAGAAATAATCATTATACTATCAACAAAGATAAAAAGCTTAGACACCCTATT GAAAGTCACTGTAATATTGATGATTTCTTGAAACCTCTAGCAATAAAGAAATCTTGA
Upstream 100 bases:
>100_bases CTAATGCTAATGGTGAACTACAAATCGTACTTCATCATTCATCTTTACCGTATACTCCAGTATAATTAATAGACAAAATA AAATTTTAAAATAATAGATA
Downstream 100 bases:
>100_bases TATGCTTTCCTATTGATAAATTTAATTATCAACATTACTAATAAATCTACGAAAGTATCTTTGTACAAAATAATGTACTA TTCCCATAATACCATGAACA
Product: hypothetical protein
Products: NA
Alternate protein names: Helix-Turn-Helix Type; AsnC Family Transcriptional Regulator; Transcriptional Regulator; ArsR Family Transcriptional Regulator; Transcriptional Regulator PaaX Family
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MPTKKQQSWTFLTNHSHVLCLINSDPNITIRDMAIKVGITERAVLNILSDLTETAYLTVTKIGRNNHYTINKDKKLRHPI ESHCNIDDFLKPLAIKKS
Sequences:
>Translated_98_residues MPTKKQQSWTFLTNHSHVLCLINSDPNITIRDMAIKVGITERAVLNILSDLTETAYLTVTKIGRNNHYTINKDKKLRHPI ESHCNIDDFLKPLAIKKS >Mature_97_residues PTKKQQSWTFLTNHSHVLCLINSDPNITIRDMAIKVGITERAVLNILSDLTETAYLTVTKIGRNNHYTINKDKKLRHPIE SHCNIDDFLKPLAIKKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11226; Mature: 11095
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTKKQQSWTFLTNHSHVLCLINSDPNITIRDMAIKVGITERAVLNILSDLTETAYLTVT CCCCCCCCEEEEECCCEEEEEECCCCCEEEEEEEEEECCCHHHHHHHHHHHCCCEEEEEE KIGRNNHYTINKDKKLRHPIESHCNIDDFLKPLAIKKS EECCCCCEEECCCCCCCCCCHHCCCHHHHHHCCCCCCC >Mature Secondary Structure PTKKQQSWTFLTNHSHVLCLINSDPNITIRDMAIKVGITERAVLNILSDLTETAYLTVT CCCCCCCEEEEECCCEEEEEECCCCCEEEEEEEEEECCCHHHHHHHHHHHCCCEEEEEE KIGRNNHYTINKDKKLRHPIESHCNIDDFLKPLAIKKS EECCCCCEEECCCCCCCCCCHHCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA