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The map label for this gene is rbgA [H]

Identifier: 89256158

GI number: 89256158

Start: 771418

End: 772290

Strand: Reverse

Name: rbgA [H]

Synonym: FTL_0785

Alternate gene names: 89256158

Gene position: 772290-771418 (Counterclockwise)

Preceding gene: 89256165

Following gene: 89256157

Centisome position: 40.73

GC content: 35.85

Gene sequence:

>873_bases
ATGTTACATTGGTTTCCCGGGCATATGCATAAAGCCACCAAAGAATTTCGCAAAAAAATGCCTTCGATTGATATCGCTAT
CGAGATAGTTGATGCACGTATACCAGACTCTAGTAGTAATCATGTTTTAGAGCAGATTGTTGGTGACAAGCCGATTATAA
AAGTTCTCTCAAAAAATGATCTGGCAGATACTACAATCACTAAGCAATGGCTGGACTACTATAAGGGTAGTGCCATTGCA
GTAAATACTCTTGAGGATAAAAATATTGTCAAAAGAATTCTTGATTTAGCACAAAAAAAATGTCCACAAAGAGGCACTGT
GCTAAAACCTATCAGAGCTATTATTTTTGGTCTGCCAAATGTAGGAAAATCTACAATGATAAATAAACTTGCAGGTCGTA
AAGTTGCTAAAACAGGTAATGAGCCAGCCGTCACAAAACTACAGCAACGTATCGATATTAGTAAAACTTTTATGATATTT
GATACTCCAGGAATTATGTTTCCTAGTCCAAAAAGTGAAAGTAGCGCTTTTAGAATCGCAGCTATAGGCTCCATCCGTGA
TACTGCGATGGATTATGAAGGTACAGCTTGTTATTTACTAAACTTTTTTAGAGAGAAATATACAAAAAACTTCTTAGCTC
GCTACAACTTCATTAGCGAAAAAGATTTTTTAGAGAGACATCCTCAAGAGATACTCAAAGATATCTCAATTGCTAAAACT
AATTCAAATCTCAAACAAGCTGCCAAAAATATAGTCCATGATTTCCGTGCTGGACACTTTGGCAAGATCTCGTTAGAAGA
TCCACAAACTATCGAAGCCGAAAAGCAACAACAAATACTACTAGAGCAACAACAACTACAACAAAATCTCTAA

Upstream 100 bases:

>100_bases
CTATAAATTTTGCCACCTTTTAGAATATAGCTTTGCATATATCAGACCTAATCGGTAAAATCTTGTCCTATATTAACTAA
ATTTATAATTTTTATCTACA

Downstream 100 bases:

>100_bases
TTGGCTTAAATCTAAACTAAAACTATTATATAATCTAACTAAATATCTTATTAAAAAATATAGTTGATGTCAGAGCAAGA
GAATATCCCTAAACAACCAA

Product: GTP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MLHWFPGHMHKATKEFRKKMPSIDIAIEIVDARIPDSSSNHVLEQIVGDKPIIKVLSKNDLADTTITKQWLDYYKGSAIA
VNTLEDKNIVKRILDLAQKKCPQRGTVLKPIRAIIFGLPNVGKSTMINKLAGRKVAKTGNEPAVTKLQQRIDISKTFMIF
DTPGIMFPSPKSESSAFRIAAIGSIRDTAMDYEGTACYLLNFFREKYTKNFLARYNFISEKDFLERHPQEILKDISIAKT
NSNLKQAAKNIVHDFRAGHFGKISLEDPQTIEAEKQQQILLEQQQLQQNL

Sequences:

>Translated_290_residues
MLHWFPGHMHKATKEFRKKMPSIDIAIEIVDARIPDSSSNHVLEQIVGDKPIIKVLSKNDLADTTITKQWLDYYKGSAIA
VNTLEDKNIVKRILDLAQKKCPQRGTVLKPIRAIIFGLPNVGKSTMINKLAGRKVAKTGNEPAVTKLQQRIDISKTFMIF
DTPGIMFPSPKSESSAFRIAAIGSIRDTAMDYEGTACYLLNFFREKYTKNFLARYNFISEKDFLERHPQEILKDISIAKT
NSNLKQAAKNIVHDFRAGHFGKISLEDPQTIEAEKQQQILLEQQQLQQNL
>Mature_290_residues
MLHWFPGHMHKATKEFRKKMPSIDIAIEIVDARIPDSSSNHVLEQIVGDKPIIKVLSKNDLADTTITKQWLDYYKGSAIA
VNTLEDKNIVKRILDLAQKKCPQRGTVLKPIRAIIFGLPNVGKSTMINKLAGRKVAKTGNEPAVTKLQQRIDISKTFMIF
DTPGIMFPSPKSESSAFRIAAIGSIRDTAMDYEGTACYLLNFFREKYTKNFLARYNFISEKDFLERHPQEILKDISIAKT
NSNLKQAAKNIVHDFRAGHFGKISLEDPQTIEAEKQQQILLEQQQLQQNL

Specific function: Binds GTP and GDP [H]

COG id: COG1161

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI93277113, Length=296, Percent_Identity=29.7297297297297, Blast_Score=124, Evalue=7e-29,
Organism=Homo sapiens, GI45643129, Length=199, Percent_Identity=27.6381909547739, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI45643127, Length=199, Percent_Identity=27.6381909547739, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI45593130, Length=199, Percent_Identity=27.6381909547739, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI7019419, Length=177, Percent_Identity=29.9435028248588, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI193211047, Length=217, Percent_Identity=29.4930875576037, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17534827, Length=274, Percent_Identity=29.9270072992701, Blast_Score=89, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6323744, Length=230, Percent_Identity=31.7391304347826, Blast_Score=76, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6320842, Length=177, Percent_Identity=31.0734463276836, Blast_Score=73, Evalue=6e-14,
Organism=Saccharomyces cerevisiae, GI6324381, Length=171, Percent_Identity=29.8245614035088, Blast_Score=67, Evalue=5e-12,
Organism=Drosophila melanogaster, GI85815858, Length=301, Percent_Identity=29.2358803986711, Blast_Score=104, Evalue=6e-23,
Organism=Drosophila melanogaster, GI28572990, Length=206, Percent_Identity=28.6407766990291, Blast_Score=86, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023179
- InterPro:   IPR019991
- InterPro:   IPR016478
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 32927; Mature: 32927

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHWFPGHMHKATKEFRKKMPSIDIAIEIVDARIPDSSSNHVLEQIVGDKPIIKVLSKND
CCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCHHHHHHCCCC
LADTTITKQWLDYYKGSAIAVNTLEDKNIVKRILDLAQKKCPQRGTVLKPIRAIIFGLPN
CHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
VGKSTMINKLAGRKVAKTGNEPAVTKLQQRIDISKTFMIFDTPGIMFPSPKSESSAFRIA
CCHHHHHHHHHCCHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEE
AIGSIRDTAMDYEGTACYLLNFFREKYTKNFLARYNFISEKDFLERHPQEILKDISIAKT
EECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHC
NSNLKQAAKNIVHDFRAGHFGKISLEDPQTIEAEKQQQILLEQQQLQQNL
CHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLHWFPGHMHKATKEFRKKMPSIDIAIEIVDARIPDSSSNHVLEQIVGDKPIIKVLSKND
CCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCHHHHHHCCCC
LADTTITKQWLDYYKGSAIAVNTLEDKNIVKRILDLAQKKCPQRGTVLKPIRAIIFGLPN
CHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
VGKSTMINKLAGRKVAKTGNEPAVTKLQQRIDISKTFMIFDTPGIMFPSPKSESSAFRIA
CCHHHHHHHHHCCHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEE
AIGSIRDTAMDYEGTACYLLNFFREKYTKNFLARYNFISEKDFLERHPQEILKDISIAKT
EECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHC
NSNLKQAAKNIVHDFRAGHFGKISLEDPQTIEAEKQQQILLEQQQLQQNL
CHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]