Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is ybeQ [C]
Identifier: 89256157
GI number: 89256157
Start: 769603
End: 771351
Strand: Reverse
Name: ybeQ [C]
Synonym: FTL_0784
Alternate gene names: 89256157
Gene position: 771351-769603 (Counterclockwise)
Preceding gene: 89256158
Following gene: 89256151
Centisome position: 40.68
GC content: 31.5
Gene sequence:
>1749_bases ATGTCAGAGCAAGAGAATATCCCTAAACAACCAAAGAAAATTGGTCCTATAACGATTACTAAGAAAAATATCATCAAAGC TTTAGTTTCAGTTGGTGTGATTGGTAGTTGTGTTTTTGGTATCAATAGTTATCTAAGCTATAGACATCAGCTTTTCTTAG AAAGTTATAATACAGCTCTTGCTGATATCCAGAACCAAAATAAGAGTGGTTATAAAAATGCTTTTGTAATCCTCAAAGAG CTTGTCGAAGATGATCAAGCCACAGCTAAAGACTACTTTTATCTTGGGTATATCTACCAATATGGCTTAGGTACAGAAAA AAATTACTATGATGCCTACAAAAACTACAAAAAAGCAGCTAATGGAAATTATCCAAAAGCTTTTTATCAGATTGCAACTT TGTATAGGGATGGTCTAGGCGTCAATAAAAGTAGTGAAAAAGCTATAGAGTATTTTAAAAAATCATATGATCTTGGTTAC AAAGACTCTGTGACAGCATTGGCGGATCTTGTTAATTCTAATAATCATATGATTTCAGTAGTTGAACCAGAAATTTTGTA TGATATTTACTTAGGCTACAAGAATGGTAGTATTATCGCGACTAATAACTCATTAATGGCAAATAAATATCTTACAACTG CTGCTGCTGAGGGATATGAGCCAGCAATAATTGTTCAAGCACGTGATTTTACCCAAGCTGGCGATAACTATAGAGCACTA ATGCTATGGCAAACATTACTATATAGCTCTGATCCTAAAGTATCAGAACTTGCCAAAAAAGAAATTATTGATGTCGAAAA ACACGTAAAACAGCAGCGTTTAAAAGAACTTGAAGAGCAAAGACAGCAGCAAATAAAAATACAGATGCAACAACGCCAAA AGCTAATCGAACAAGCTAAAAAACTTGATCAAATTGAACAAAAGAAAGAAGTTGGACTATCAACACCAAAGCAAAATTTC AACAATCTAAATGGTTTGATATATATAAACCTTTTTAAAGCTAATAAAGGTCAACTACAGCAATTCTATAAAGATATTCT TGGAGTTGAAGTTGATACAAATTTCATAAAAACAGGAGATAATTTAGATAATAGTTACATAGATGACTTTTTTATATTAG CTAAACTCAAAAATAATCAATCATCTTTAAAATTTGATTTTGCTAATAGCGCTAACAATAATAAATTCGAAGGTATTATC TACTACTATTACAATAACAAAGACAAAATTAGCCAAGATTTATTAGCAAAAATAATCAAAAATAATAAACCCAAAACATC TTCGCTATTACCTAAAATTTATGATGAGCTAGAGACTCCAGCAAAACAGCTAGAAGTCAATCAACAAGATAACTTATCAA AACAGCAACAAAATAAAAAACAATCAAAAGCTGAAAAAATTCAACTAACACATGAAGAAAAAATCCATAGAATGCAGGTA TTTGCCCAAAAAGGAGACTTTAGGCAATTCTACAAACTTGAGCAAGCTGCAAAAGATGGTGATGTCTACGCAATTTATTA CACTGGTGAATACTACTACAATAACAAAGAATATAAAGAAGCGCTTAAATATTTCAATGAAGCTGCAGATAAAGGCTATG GTCAAGCATACTACAAATTAGCCTCACTATACTATAACGAAGAGCAAAATGGTGTACCATATAATAAAGAAAAGGCAATG TACTATTATAAGAAAGCCGCAGAACTAGGAGTCAGAAATGCTCAGCATATATTGATGCTTATTGAATAA
Upstream 100 bases:
>100_bases ACTAGAGCAACAACAACTACAACAAAATCTCTAATTGGCTTAAATCTAAACTAAAACTATTATATAATCTAACTAAATAT CTTATTAAAAAATATAGTTG
Downstream 100 bases:
>100_bases TACTCTCAATCTCACTCATTAGCTTATTTATCTCAGCGGTATTTTGCTTAATCTCATTGACTAGCTGTGTTGGTGATTTA TGCTCGATAGTTTCAACTTT
Product: lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 582; Mature: 581
Protein sequence:
>582_residues MSEQENIPKQPKKIGPITITKKNIIKALVSVGVIGSCVFGINSYLSYRHQLFLESYNTALADIQNQNKSGYKNAFVILKE LVEDDQATAKDYFYLGYIYQYGLGTEKNYYDAYKNYKKAANGNYPKAFYQIATLYRDGLGVNKSSEKAIEYFKKSYDLGY KDSVTALADLVNSNNHMISVVEPEILYDIYLGYKNGSIIATNNSLMANKYLTTAAAEGYEPAIIVQARDFTQAGDNYRAL MLWQTLLYSSDPKVSELAKKEIIDVEKHVKQQRLKELEEQRQQQIKIQMQQRQKLIEQAKKLDQIEQKKEVGLSTPKQNF NNLNGLIYINLFKANKGQLQQFYKDILGVEVDTNFIKTGDNLDNSYIDDFFILAKLKNNQSSLKFDFANSANNNKFEGII YYYYNNKDKISQDLLAKIIKNNKPKTSSLLPKIYDELETPAKQLEVNQQDNLSKQQQNKKQSKAEKIQLTHEEKIHRMQV FAQKGDFRQFYKLEQAAKDGDVYAIYYTGEYYYNNKEYKEALKYFNEAADKGYGQAYYKLASLYYNEEQNGVPYNKEKAM YYYKKAAELGVRNAQHILMLIE
Sequences:
>Translated_582_residues MSEQENIPKQPKKIGPITITKKNIIKALVSVGVIGSCVFGINSYLSYRHQLFLESYNTALADIQNQNKSGYKNAFVILKE LVEDDQATAKDYFYLGYIYQYGLGTEKNYYDAYKNYKKAANGNYPKAFYQIATLYRDGLGVNKSSEKAIEYFKKSYDLGY KDSVTALADLVNSNNHMISVVEPEILYDIYLGYKNGSIIATNNSLMANKYLTTAAAEGYEPAIIVQARDFTQAGDNYRAL MLWQTLLYSSDPKVSELAKKEIIDVEKHVKQQRLKELEEQRQQQIKIQMQQRQKLIEQAKKLDQIEQKKEVGLSTPKQNF NNLNGLIYINLFKANKGQLQQFYKDILGVEVDTNFIKTGDNLDNSYIDDFFILAKLKNNQSSLKFDFANSANNNKFEGII YYYYNNKDKISQDLLAKIIKNNKPKTSSLLPKIYDELETPAKQLEVNQQDNLSKQQQNKKQSKAEKIQLTHEEKIHRMQV FAQKGDFRQFYKLEQAAKDGDVYAIYYTGEYYYNNKEYKEALKYFNEAADKGYGQAYYKLASLYYNEEQNGVPYNKEKAM YYYKKAAELGVRNAQHILMLIE >Mature_581_residues SEQENIPKQPKKIGPITITKKNIIKALVSVGVIGSCVFGINSYLSYRHQLFLESYNTALADIQNQNKSGYKNAFVILKEL VEDDQATAKDYFYLGYIYQYGLGTEKNYYDAYKNYKKAANGNYPKAFYQIATLYRDGLGVNKSSEKAIEYFKKSYDLGYK DSVTALADLVNSNNHMISVVEPEILYDIYLGYKNGSIIATNNSLMANKYLTTAAAEGYEPAIIVQARDFTQAGDNYRALM LWQTLLYSSDPKVSELAKKEIIDVEKHVKQQRLKELEEQRQQQIKIQMQQRQKLIEQAKKLDQIEQKKEVGLSTPKQNFN NLNGLIYINLFKANKGQLQQFYKDILGVEVDTNFIKTGDNLDNSYIDDFFILAKLKNNQSSLKFDFANSANNNKFEGIIY YYYNNKDKISQDLLAKIIKNNKPKTSSLLPKIYDELETPAKQLEVNQQDNLSKQQQNKKQSKAEKIQLTHEEKIHRMQVF AQKGDFRQFYKLEQAAKDGDVYAIYYTGEYYYNNKEYKEALKYFNEAADKGYGQAYYKLASLYYNEEQNGVPYNKEKAMY YYKKAAELGVRNAQHILMLIE
Specific function: Unknown
COG id: COG0790
COG function: function code R; FOG: TPR repeat, SEL1 subfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67355; Mature: 67224
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQENIPKQPKKIGPITITKKNIIKALVSVGVIGSCVFGINSYLSYRHQLFLESYNTAL CCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADIQNQNKSGYKNAFVILKELVEDDQATAKDYFYLGYIYQYGLGTEKNYYDAYKNYKKAA HHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHEEEEEHHHHHCCCCCCHHHHHHHHHHHHC NGNYPKAFYQIATLYRDGLGVNKSSEKAIEYFKKSYDLGYKDSVTALADLVNSNNHMISV CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEE VEPEILYDIYLGYKNGSIIATNNSLMANKYLTTAAAEGYEPAIIVQARDFTQAGDNYRAL ECCCEEEEEEEEECCCEEEEECCCEEHHHHHHHHHCCCCCCEEEEEECCHHCCCCCCHHH MLWQTLLYSSDPKVSELAKKEIIDVEKHVKQQRLKELEEQRQQQIKIQMQQRQKLIEQAK HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLDQIEQKKEVGLSTPKQNFNNLNGLIYINLFKANKGQLQQFYKDILGVEVDTNFIKTGD HHHHHHHHHHCCCCCCHHHHCCCCCEEEEEEEECCHHHHHHHHHHHCCCEECCCEEECCC NLDNSYIDDFFILAKLKNNQSSLKFDFANSANNNKFEGIIYYYYNNKDKISQDLLAKIIK CCCCHHHHHEEEEEEECCCCCCEEEEECCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHH NNKPKTSSLLPKIYDELETPAKQLEVNQQDNLSKQQQNKKQSKAEKIQLTHEEKIHRMQV CCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHEECCHHHHHHHHHH FAQKGDFRQFYKLEQAAKDGDVYAIYYTGEYYYNNKEYKEALKYFNEAADKGYGQAYYKL HHHCCCHHHHHHHHHHCCCCCEEEEEEECEEEECCHHHHHHHHHHHHHHCCCCHHHHHHH ASLYYNEEQNGVPYNKEKAMYYYKKAAELGVRNAQHILMLIE HHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEC >Mature Secondary Structure SEQENIPKQPKKIGPITITKKNIIKALVSVGVIGSCVFGINSYLSYRHQLFLESYNTAL CCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADIQNQNKSGYKNAFVILKELVEDDQATAKDYFYLGYIYQYGLGTEKNYYDAYKNYKKAA HHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHEEEEEHHHHHCCCCCCHHHHHHHHHHHHC NGNYPKAFYQIATLYRDGLGVNKSSEKAIEYFKKSYDLGYKDSVTALADLVNSNNHMISV CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEE VEPEILYDIYLGYKNGSIIATNNSLMANKYLTTAAAEGYEPAIIVQARDFTQAGDNYRAL ECCCEEEEEEEEECCCEEEEECCCEEHHHHHHHHHCCCCCCEEEEEECCHHCCCCCCHHH MLWQTLLYSSDPKVSELAKKEIIDVEKHVKQQRLKELEEQRQQQIKIQMQQRQKLIEQAK HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLDQIEQKKEVGLSTPKQNFNNLNGLIYINLFKANKGQLQQFYKDILGVEVDTNFIKTGD HHHHHHHHHHCCCCCCHHHHCCCCCEEEEEEEECCHHHHHHHHHHHCCCEECCCEEECCC NLDNSYIDDFFILAKLKNNQSSLKFDFANSANNNKFEGIIYYYYNNKDKISQDLLAKIIK CCCCHHHHHEEEEEEECCCCCCEEEEECCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHH NNKPKTSSLLPKIYDELETPAKQLEVNQQDNLSKQQQNKKQSKAEKIQLTHEEKIHRMQV CCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHEECCHHHHHHHHHH FAQKGDFRQFYKLEQAAKDGDVYAIYYTGEYYYNNKEYKEALKYFNEAADKGYGQAYYKL HHHCCCHHHHHHHHHHCCCCCEEEEEEECEEEECCHHHHHHHHHHHHHHCCCCHHHHHHH ASLYYNEEQNGVPYNKEKAMYYYKKAAELGVRNAQHILMLIE HHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA