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The map label for this gene is dtpB [H]

Identifier: 89256080

GI number: 89256080

Start: 679337

End: 680818

Strand: Reverse

Name: dtpB [H]

Synonym: FTL_0691

Alternate gene names: 89256080

Gene position: 680818-679337 (Counterclockwise)

Preceding gene: 89256081

Following gene: 89256079

Centisome position: 35.91

GC content: 33.6

Gene sequence:

>1482_bases
ATGCAAAAAAATTATAATACTCTATCCGCACCTTTCTGGATTGTCTGGGGTATAGAGTTCTGGGAAAGGTTTGGATTTTA
TGGCTTTCAAGCAATTATCGCGCTGTATTTTACACAGAAACTTGGGCTAAGTGAAAGAGAAACTATTTATCTGATGGGGT
CTTTTTTTGCTTTTACATATGGATTTATATGGGTTGGTGGACTCATAGGTGACAAAGTTCTTGGCGCTAAACGTACAATT
TTATTTGGTGCGGTAATACTGTGTTTATCTTACTTAAGCTTTATCTTTGCAGATAAACAAAACGTTTATTATATTTTTTC
AGGAATTATTATTGGTAATGCCATATTTAAAGCAAACCCTTCTTCTTTAATTTCAAAGATGTTTGATAAAGGCGATGGCC
GCTTAAATAGTGCTATGACTTTATATTACCTTGCAATTAATATGGGTGGGCTAATCTGTATGGCTTTGACACCTGTGATA
TCACAAATTTATGGATATACTCATGCTTTTATACTTTGTGGGATTGGTCTATTTGTTGGTATATTAGGATTTATATTGTT
TTATAAAAAGCTAGAGGGTCTAGACACAGAAGCGGGTAAACATCCTATCAATAAAACTCATCTAACATATATCATTGCAG
GAGTTATCGCAGCATTTTTAATAGTTGCAAATATTCTTCCTAATACGACCCTATGTATAGAACTAACTGCTGTTATTGTA
ACTATAGCTACACTATATTTCTTATATGTAGCTTTTAGCCTTGAGTCATATGAAAGAAATAGAATGCTTGTAGCTCTTGT
ACTTATCATTGAAGCGATAATCTTCTACTCTTTATATTTTCAAATGCCAACTACACTAACTTTCTTTGCTCAGCACAATG
TTGAACTTTCTGTACTTGGTTGGCATGTCCCTGCTGCACAATATCAATTTTTAAATCCTCTATGGATTTTGATATTATCA
CCTATTCTTGCAGCAGTATACAAAAAAAGTAAATTAACACACGCTACTAAGTTTTGTATTGGAACAGCGTTAATGTTTAT
ATCATACGCAACTTTATACTCTACTAGATATTTCGCAACTAATGCTGTAGTTTCAGGTAACTGGCTAATTCTATCATACG
CAACCTCTTCTTTAGGTGAGCTACTTATATCAGGCTTAGGGCTAGCAATGGTTGCTGAGCTATGCCCAGCTTTCATATCT
GGATTTGTGATGGGATTTTGGTTTCTAGCTACGATGATTGCATCTTATGTTGCTTCTTACATAGGATCATTTATAGCGCT
ACCTCAAAGTGGTGATACTATCTCTAAACAACAAAGCTTAGACACCTATACAGCAGTATTTGGTTATGTCGCTATTGGTA
TTTTAGTTACTACAATAATTATGGTTATTTTGACTCCTATACTAAATAAATACATAAACAGAATACGGGTTATTGATGAT
CATAAAGCAGATATTGACAATATTACATATCCTCAAAACTAA

Upstream 100 bases:

>100_bases
ATTAAATCAATAACCTTTTACTGTAAATAATTATTGCAAAAGTTTGTACTCGATGTTTTAATGGGTTTTTTAGTATAATT
AATATTAGGAGAAAATGCCT

Downstream 100 bases:

>100_bases
AAAATCTTAATTTAACACCTTCTAATAAAGAAATAATCTTGCAAATTTATTTCAATACTTTGTTTTTTTGCTAGAATTAG
TTCTAGTAATTAACAATCTT

Product: proton-dependent oligopeptide transport (POT) family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MQKNYNTLSAPFWIVWGIEFWERFGFYGFQAIIALYFTQKLGLSERETIYLMGSFFAFTYGFIWVGGLIGDKVLGAKRTI
LFGAVILCLSYLSFIFADKQNVYYIFSGIIIGNAIFKANPSSLISKMFDKGDGRLNSAMTLYYLAINMGGLICMALTPVI
SQIYGYTHAFILCGIGLFVGILGFILFYKKLEGLDTEAGKHPINKTHLTYIIAGVIAAFLIVANILPNTTLCIELTAVIV
TIATLYFLYVAFSLESYERNRMLVALVLIIEAIIFYSLYFQMPTTLTFFAQHNVELSVLGWHVPAAQYQFLNPLWILILS
PILAAVYKKSKLTHATKFCIGTALMFISYATLYSTRYFATNAVVSGNWLILSYATSSLGELLISGLGLAMVAELCPAFIS
GFVMGFWFLATMIASYVASYIGSFIALPQSGDTISKQQSLDTYTAVFGYVAIGILVTTIIMVILTPILNKYINRIRVIDD
HKADIDNITYPQN

Sequences:

>Translated_493_residues
MQKNYNTLSAPFWIVWGIEFWERFGFYGFQAIIALYFTQKLGLSERETIYLMGSFFAFTYGFIWVGGLIGDKVLGAKRTI
LFGAVILCLSYLSFIFADKQNVYYIFSGIIIGNAIFKANPSSLISKMFDKGDGRLNSAMTLYYLAINMGGLICMALTPVI
SQIYGYTHAFILCGIGLFVGILGFILFYKKLEGLDTEAGKHPINKTHLTYIIAGVIAAFLIVANILPNTTLCIELTAVIV
TIATLYFLYVAFSLESYERNRMLVALVLIIEAIIFYSLYFQMPTTLTFFAQHNVELSVLGWHVPAAQYQFLNPLWILILS
PILAAVYKKSKLTHATKFCIGTALMFISYATLYSTRYFATNAVVSGNWLILSYATSSLGELLISGLGLAMVAELCPAFIS
GFVMGFWFLATMIASYVASYIGSFIALPQSGDTISKQQSLDTYTAVFGYVAIGILVTTIIMVILTPILNKYINRIRVIDD
HKADIDNITYPQN
>Mature_493_residues
MQKNYNTLSAPFWIVWGIEFWERFGFYGFQAIIALYFTQKLGLSERETIYLMGSFFAFTYGFIWVGGLIGDKVLGAKRTI
LFGAVILCLSYLSFIFADKQNVYYIFSGIIIGNAIFKANPSSLISKMFDKGDGRLNSAMTLYYLAINMGGLICMALTPVI
SQIYGYTHAFILCGIGLFVGILGFILFYKKLEGLDTEAGKHPINKTHLTYIIAGVIAAFLIVANILPNTTLCIELTAVIV
TIATLYFLYVAFSLESYERNRMLVALVLIIEAIIFYSLYFQMPTTLTFFAQHNVELSVLGWHVPAAQYQFLNPLWILILS
PILAAVYKKSKLTHATKFCIGTALMFISYATLYSTRYFATNAVVSGNWLILSYATSSLGELLISGLGLAMVAELCPAFIS
GFVMGFWFLATMIASYVASYIGSFIALPQSGDTISKQQSLDTYTAVFGYVAIGILVTTIIMVILTPILNKYINRIRVIDD
HKADIDNITYPQN

Specific function: Proton-dependent permease that transports di- and tripeptides [H]

COG id: COG3104

COG function: function code E; Dipeptide/tripeptide permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PTR2/POT transporter (TC 2.A.17) family. DtpB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787922, Length=472, Percent_Identity=40.4661016949153, Blast_Score=343, Evalue=1e-95,
Organism=Escherichia coli, GI1789911, Length=472, Percent_Identity=37.0762711864407, Blast_Score=323, Evalue=1e-89,
Organism=Escherichia coli, GI1790572, Length=465, Percent_Identity=24.7311827956989, Blast_Score=125, Evalue=8e-30,
Organism=Escherichia coli, GI1786927, Length=499, Percent_Identity=22.8456913827655, Blast_Score=116, Evalue=4e-27,
Organism=Drosophila melanogaster, GI24639583, Length=325, Percent_Identity=25.8461538461538, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24639585, Length=325, Percent_Identity=25.8461538461538, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24639581, Length=325, Percent_Identity=25.8461538461538, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016196
- InterPro:   IPR000109
- InterPro:   IPR005279
- InterPro:   IPR018456 [H]

Pfam domain/function: PF00854 PTR2 [H]

EC number: NA

Molecular weight: Translated: 54909; Mature: 54909

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKNYNTLSAPFWIVWGIEFWERFGFYGFQAIIALYFTQKLGLSERETIYLMGSFFAFTY
CCCCCCCCCCCEEEEECHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHH
GFIWVGGLIGDKVLGAKRTILFGAVILCLSYLSFIFADKQNVYYIFSGIIIGNAIFKANP
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCHHHCCCH
SSLISKMFDKGDGRLNSAMTLYYLAINMGGLICMALTPVISQIYGYTHAFILCGIGLFVG
HHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILGFILFYKKLEGLDTEAGKHPINKTHLTYIIAGVIAAFLIVANILPNTTLCIELTAVIV
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
TIATLYFLYVAFSLESYERNRMLVALVLIIEAIIFYSLYFQMPTTLTFFAQHNVELSVLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEE
WHVPAAQYQFLNPLWILILSPILAAVYKKSKLTHATKFCIGTALMFISYATLYSTRYFAT
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NAVVSGNWLILSYATSSLGELLISGLGLAMVAELCPAFISGFVMGFWFLATMIASYVASY
CEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGSFIALPQSGDTISKQQSLDTYTAVFGYVAIGILVTTIIMVILTPILNKYINRIRVIDD
HHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
HKADIDNITYPQN
CCCCCCCCCCCCC
>Mature Secondary Structure
MQKNYNTLSAPFWIVWGIEFWERFGFYGFQAIIALYFTQKLGLSERETIYLMGSFFAFTY
CCCCCCCCCCCEEEEECHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHH
GFIWVGGLIGDKVLGAKRTILFGAVILCLSYLSFIFADKQNVYYIFSGIIIGNAIFKANP
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCHHHCCCH
SSLISKMFDKGDGRLNSAMTLYYLAINMGGLICMALTPVISQIYGYTHAFILCGIGLFVG
HHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILGFILFYKKLEGLDTEAGKHPINKTHLTYIIAGVIAAFLIVANILPNTTLCIELTAVIV
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
TIATLYFLYVAFSLESYERNRMLVALVLIIEAIIFYSLYFQMPTTLTFFAQHNVELSVLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEE
WHVPAAQYQFLNPLWILILSPILAAVYKKSKLTHATKFCIGTALMFISYATLYSTRYFAT
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NAVVSGNWLILSYATSSLGELLISGLGLAMVAELCPAFISGFVMGFWFLATMIASYVASY
CEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGSFIALPQSGDTISKQQSLDTYTAVFGYVAIGILVTTIIMVILTPILNKYINRIRVIDD
HHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
HKADIDNITYPQN
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA