| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is yaeT [H]
Identifier: 89255942
GI number: 89255942
Start: 517669
End: 520047
Strand: Direct
Name: yaeT [H]
Synonym: FTL_0535
Alternate gene names: 89255942
Gene position: 517669-520047 (Clockwise)
Preceding gene: 89255941
Following gene: 89255943
Centisome position: 27.3
GC content: 34.13
Gene sequence:
>2379_bases GTGTTTTTTTTAAGAAAGAAGTTTGTGTTAGCCTCTCTTCTTGTGGGTATTGCATTTAATGGTTGGGCTGATAATGATAG CTTTATATTAGATAATGTATCTATCAATGGCTTAGAGGGGTTACAAAGTGATGTAGTTAAGAGCCGCATTGGCTATAAAA AAGGTAGCTATATCACCCCAGAAGATACAAACCAGATTATTAATAACCTTTATGGTACTGGATTTTTCAATAGTGTCGAT TTATACCGTAAAGGGAGTAATCTTTTTATTAACGTCAAAGAAAGACCGATTATAGCTGGATTTAGTTTTAGTGGTAATAA AAAGCTTAGTAAGGATAATCTTGAGAAAGTCTTTACTGATGCAGGTATATATGTAGGTAATGTTTATAATCCTAATACGA TGTTTTTGCTTAAGCAGTCTTTGCTTAATCAGTACTCTATGATGGGCTTATATGGTGCAAAAATAGAGGAAAACATTCGA AAGCTACCAAATAATAGAATTGATATAAATGTAAACTTTCAAGAGGGTAAACCAGCAATTATTGATTCAATAAATTTTGT CGGTAATAAAAGTTTTGCTGATAGTGATTTAGATAGTAGTGTTGCGTTTGAAGTACCGTCCATATGGAATTTATGGGGAT TTTTGGCACCATTTGATAGTTATTCTCCAGATGGAATGAATCAGTCTGTCCAAGGCTTAACTAATTATTATTTAGACAGA GGTTATTTAGATTTTAAGGTTACCTCAAAGCAAGCATCAATGTCTAAGGATCGCGAGCATTCGTATATTACTTTTGATGT TGCAGAAGGTCAGATTTATAAGGTTGGAAGTGTTTCCTTAACAGGTAAGTTTATTCTACCAAAATCAGAGTTAGAGTCTT TGGTGAAGATAAAACAGGGAGAGGTATTTTCAAAATCTAAATTAGTTCAGACAGTTGAGGGGATAAAAACTCTACTAGGT AGTAAAGGATATGCCTTTGCTACGGTTAATCCTATTCCTACAGTTGATAAGGATAATCATATAGTTTTTTTTAAGATTGT TGTTGATGCAGGAAAAAAGGTTTATGTAAATAGAATAAATTTCTTTGGTAATAATGTCACTAATGATTACGTATTTCGTC GTCAATTACAATACTATGAACAGAGTCAATATAACAAAGAGGCAATAGATAAATCTCAAAGAAGATTAGAGCAACTACCA TATGTTGGTGCAGCTGATATGGAGCTTGTTCCTGTTGCAGGGTCTGATGATTTGGTTGATGTAAATTATAATATTAAAGA AAGGAATGCTAACTCGATAAGTGGAAGTTTAGGCTTCTCGGATTTATATGGATTTATGATAGGCGGTAGGCTGAATATGC CTAACGTTTTTGGTACTGGAAATACTTTTAATCTTAATGCGCAACTTTCAATTCCTTTCCAGCAGTTAGATATAAGTTAT ATTGATCCGTTTTTTACTACATCAGGGGTTAGCCAAAGTATTTCTATATATATAAATAGATCAAACTTTGCTAAAACAAA TGCTGTTGCTGCGTATCAATTAGATACGATTGGTGCAAGATTGATGTATGGAGTGCCTATATCAACATTTAGTAATGTTT CAGGAGGTATAACTTTTGCTAATAATACGGTTAAGCAGTCAGATGGATACCAGTCTTCAATTGTACAGTGGTTTATCCAG CAGCAGGGTGGTAGAAACAATTTTAACGAGCCGGCACTGACAGCAGGTTGGAGTTATGATAACTCAAATAAATATATTTT TGCTACAGATGGTGGTTCATTTAATCTAAATGGTTCAGTTAACATTCCAGTTATCAGTAATATTAATGCTTATAAGATAG AGGTTGGAGGAACTTATAATATAGCAGTGCCAAATACTGACATGTCAGCATTAACTATTAGAGCTGGAGTTCAGTATGGT GGTGGTTATGGTAAGACAAAACAGCTGCCTTTTTACGAGAACTTCTACGGAGGTGGTTGGGGAAGTGTGCGTGGTTTCTT ACAAGGTTCTCTTGGTCCACGTGATATTAATCTGGTAAATGGTGAGGTAGGTAACTCAATTGGGGGTAACCTTAATATTT ATAATAACTATGATGTATTATTCCCTGTACCTTTTATCAAGGATAGTTCTAAGATGAGAATAGGTGCTTTTTTAGATATA GGTAATACGTATACAACATATAATCTAAATGGAGTAGTAGCACCTCAACCTAAGCAAGAAACTACTCCTTCATTTTCTAA TCTAAAGTATTCGGTTGGCGTTGAGTTTAGATGGGCTTCACCAATGGGCCCACTAGCTGTATCATTTGCTCAGCCATTTA ATGTACAAAAAGGTGATATAACTCAAGTATTTCAATTCTCATTAGGACAAAATTTCTAA
Upstream 100 bases:
>100_bases CAAAAGAGTTAAATTTTGAGAATCCAAAAAATATAGAAGAAGTTTTTGAAATAGATAGAAAAACTCGTGAATATGTGGAT TCTGTTTTGGGGTAAATTGA
Downstream 100 bases:
>100_bases ACTATATATATTCTTTTCTTTAAGAAAAAATTAGATTTAATTGGATAGGTATCTAAAACGGTTTAACAACTTTGATAATA TTGTGTTAGAATCTATTATT
Product: outer membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 792; Mature: 792
Protein sequence:
>792_residues MFFLRKKFVLASLLVGIAFNGWADNDSFILDNVSINGLEGLQSDVVKSRIGYKKGSYITPEDTNQIINNLYGTGFFNSVD LYRKGSNLFINVKERPIIAGFSFSGNKKLSKDNLEKVFTDAGIYVGNVYNPNTMFLLKQSLLNQYSMMGLYGAKIEENIR KLPNNRIDINVNFQEGKPAIIDSINFVGNKSFADSDLDSSVAFEVPSIWNLWGFLAPFDSYSPDGMNQSVQGLTNYYLDR GYLDFKVTSKQASMSKDREHSYITFDVAEGQIYKVGSVSLTGKFILPKSELESLVKIKQGEVFSKSKLVQTVEGIKTLLG SKGYAFATVNPIPTVDKDNHIVFFKIVVDAGKKVYVNRINFFGNNVTNDYVFRRQLQYYEQSQYNKEAIDKSQRRLEQLP YVGAADMELVPVAGSDDLVDVNYNIKERNANSISGSLGFSDLYGFMIGGRLNMPNVFGTGNTFNLNAQLSIPFQQLDISY IDPFFTTSGVSQSISIYINRSNFAKTNAVAAYQLDTIGARLMYGVPISTFSNVSGGITFANNTVKQSDGYQSSIVQWFIQ QQGGRNNFNEPALTAGWSYDNSNKYIFATDGGSFNLNGSVNIPVISNINAYKIEVGGTYNIAVPNTDMSALTIRAGVQYG GGYGKTKQLPFYENFYGGGWGSVRGFLQGSLGPRDINLVNGEVGNSIGGNLNIYNNYDVLFPVPFIKDSSKMRIGAFLDI GNTYTTYNLNGVVAPQPKQETTPSFSNLKYSVGVEFRWASPMGPLAVSFAQPFNVQKGDITQVFQFSLGQNF
Sequences:
>Translated_792_residues MFFLRKKFVLASLLVGIAFNGWADNDSFILDNVSINGLEGLQSDVVKSRIGYKKGSYITPEDTNQIINNLYGTGFFNSVD LYRKGSNLFINVKERPIIAGFSFSGNKKLSKDNLEKVFTDAGIYVGNVYNPNTMFLLKQSLLNQYSMMGLYGAKIEENIR KLPNNRIDINVNFQEGKPAIIDSINFVGNKSFADSDLDSSVAFEVPSIWNLWGFLAPFDSYSPDGMNQSVQGLTNYYLDR GYLDFKVTSKQASMSKDREHSYITFDVAEGQIYKVGSVSLTGKFILPKSELESLVKIKQGEVFSKSKLVQTVEGIKTLLG SKGYAFATVNPIPTVDKDNHIVFFKIVVDAGKKVYVNRINFFGNNVTNDYVFRRQLQYYEQSQYNKEAIDKSQRRLEQLP YVGAADMELVPVAGSDDLVDVNYNIKERNANSISGSLGFSDLYGFMIGGRLNMPNVFGTGNTFNLNAQLSIPFQQLDISY IDPFFTTSGVSQSISIYINRSNFAKTNAVAAYQLDTIGARLMYGVPISTFSNVSGGITFANNTVKQSDGYQSSIVQWFIQ QQGGRNNFNEPALTAGWSYDNSNKYIFATDGGSFNLNGSVNIPVISNINAYKIEVGGTYNIAVPNTDMSALTIRAGVQYG GGYGKTKQLPFYENFYGGGWGSVRGFLQGSLGPRDINLVNGEVGNSIGGNLNIYNNYDVLFPVPFIKDSSKMRIGAFLDI GNTYTTYNLNGVVAPQPKQETTPSFSNLKYSVGVEFRWASPMGPLAVSFAQPFNVQKGDITQVFQFSLGQNF >Mature_792_residues MFFLRKKFVLASLLVGIAFNGWADNDSFILDNVSINGLEGLQSDVVKSRIGYKKGSYITPEDTNQIINNLYGTGFFNSVD LYRKGSNLFINVKERPIIAGFSFSGNKKLSKDNLEKVFTDAGIYVGNVYNPNTMFLLKQSLLNQYSMMGLYGAKIEENIR KLPNNRIDINVNFQEGKPAIIDSINFVGNKSFADSDLDSSVAFEVPSIWNLWGFLAPFDSYSPDGMNQSVQGLTNYYLDR GYLDFKVTSKQASMSKDREHSYITFDVAEGQIYKVGSVSLTGKFILPKSELESLVKIKQGEVFSKSKLVQTVEGIKTLLG SKGYAFATVNPIPTVDKDNHIVFFKIVVDAGKKVYVNRINFFGNNVTNDYVFRRQLQYYEQSQYNKEAIDKSQRRLEQLP YVGAADMELVPVAGSDDLVDVNYNIKERNANSISGSLGFSDLYGFMIGGRLNMPNVFGTGNTFNLNAQLSIPFQQLDISY IDPFFTTSGVSQSISIYINRSNFAKTNAVAAYQLDTIGARLMYGVPISTFSNVSGGITFANNTVKQSDGYQSSIVQWFIQ QQGGRNNFNEPALTAGWSYDNSNKYIFATDGGSFNLNGSVNIPVISNINAYKIEVGGTYNIAVPNTDMSALTIRAGVQYG GGYGKTKQLPFYENFYGGGWGSVRGFLQGSLGPRDINLVNGEVGNSIGGNLNIYNNYDVLFPVPFIKDSSKMRIGAFLDI GNTYTTYNLNGVVAPQPKQETTPSFSNLKYSVGVEFRWASPMGPLAVSFAQPFNVQKGDITQVFQFSLGQNF
Specific function: Involved in the assembly of outer membrane proteins. Does not play a direct role in the export of outer membrane lipids [H]
COG id: COG4775
COG function: function code M; Outer membrane protein/protective antigen OMA87
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surface antigen D15 family [H]
Homologues:
Organism=Escherichia coli, GI1786374, Length=824, Percent_Identity=30.0970873786408, Blast_Score=380, Evalue=1e-106,
Paralogues:
None
Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000184 - InterPro: IPR016474 - InterPro: IPR010827 [H]
Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]
EC number: NA
Molecular weight: Translated: 87665; Mature: 87665
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFLRKKFVLASLLVGIAFNGWADNDSFILDNVSINGLEGLQSDVVKSRIGYKKGSYITP CCEEHHHHHHHHHHHHHEECCCCCCCCEEEECCEECCCHHHHHHHHHHHCCCCCCCEECC EDTNQIINNLYGTGFFNSVDLYRKGSNLFINVKERPIIAGFSFSGNKKLSKDNLEKVFTD CCHHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCEEEEEEECCCCCCCCHHHHHHHHHC AGIYVGNVYNPNTMFLLKQSLLNQYSMMGLYGAKIEENIRKLPNNRIDINVNFQEGKPAI CCEEEECEECCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEEECCCCCCE IDSINFVGNKSFADSDLDSSVAFEVPSIWNLWGFLAPFDSYSPDGMNQSVQGLTNYYLDR EECEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC GYLDFKVTSKQASMSKDREHSYITFDVAEGQIYKVGSVSLTGKFILPKSELESLVKIKQG CEEEEEEECCHHHCCCCCCCCEEEEEECCCEEEEECEEEEEEEEECCHHHHHHHHHHHCC EVFSKSKLVQTVEGIKTLLGSKGYAFATVNPIPTVDKDNHIVFFKIVVDAGKKVYVNRIN CCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCEEEEEEEE FFGNNVTNDYVFRRQLQYYEQSQYNKEAIDKSQRRLEQLPYVGAADMELVPVAGSDDLVD ECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEE VNYNIKERNANSISGSLGFSDLYGFMIGGRLNMPNVFGTGNTFNLNAQLSIPFQQLDISY EEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCEECCCCEEEEEEEEECCHHHCCHHH IDPFFTTSGVSQSISIYINRSNFAKTNAVAAYQLDTIGARLMYGVPISTFSNVSGGITFA CCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEHHCCCEEEECCCCHHHCCCCCCEEEE NNTVKQSDGYQSSIVQWFIQQQGGRNNFNEPALTAGWSYDNSNKYIFATDGGSFNLNGSV CCCEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCEEEEECCCEEEECCEE NIPVISNINAYKIEVGGTYNIAVPNTDMSALTIRAGVQYGGGYGKTKQLPFYENFYGGGW EEEEEECCCEEEEEECCEEEEEECCCCCCEEEEEECCEECCCCCCCCCCCCHHCCCCCCH GSVRGFLQGSLGPRDINLVNGEVGNSIGGNLNIYNNYDVLFPVPFIKDSSKMRIGAFLDI HHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEEECCEEEEECCCCCCCCCEEEEEEEEC GNTYTTYNLNGVVAPQPKQETTPSFSNLKYSVGVEFRWASPMGPLAVSFAQPFNVQKGDI CCEEEEEEECEEECCCCCCCCCCCHHCEEEEEEEEEEECCCCCCEEEEECCCCCCCCCCH TQVFQFSLGQNF HHHHHHHCCCCC >Mature Secondary Structure MFFLRKKFVLASLLVGIAFNGWADNDSFILDNVSINGLEGLQSDVVKSRIGYKKGSYITP CCEEHHHHHHHHHHHHHEECCCCCCCCEEEECCEECCCHHHHHHHHHHHCCCCCCCEECC EDTNQIINNLYGTGFFNSVDLYRKGSNLFINVKERPIIAGFSFSGNKKLSKDNLEKVFTD CCHHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCEEEEEEECCCCCCCCHHHHHHHHHC AGIYVGNVYNPNTMFLLKQSLLNQYSMMGLYGAKIEENIRKLPNNRIDINVNFQEGKPAI CCEEEECEECCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEEECCCCCCE IDSINFVGNKSFADSDLDSSVAFEVPSIWNLWGFLAPFDSYSPDGMNQSVQGLTNYYLDR EECEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC GYLDFKVTSKQASMSKDREHSYITFDVAEGQIYKVGSVSLTGKFILPKSELESLVKIKQG CEEEEEEECCHHHCCCCCCCCEEEEEECCCEEEEECEEEEEEEEECCHHHHHHHHHHHCC EVFSKSKLVQTVEGIKTLLGSKGYAFATVNPIPTVDKDNHIVFFKIVVDAGKKVYVNRIN CCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCEEEEEEEE FFGNNVTNDYVFRRQLQYYEQSQYNKEAIDKSQRRLEQLPYVGAADMELVPVAGSDDLVD ECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEE VNYNIKERNANSISGSLGFSDLYGFMIGGRLNMPNVFGTGNTFNLNAQLSIPFQQLDISY EEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCEECCCCEEEEEEEEECCHHHCCHHH IDPFFTTSGVSQSISIYINRSNFAKTNAVAAYQLDTIGARLMYGVPISTFSNVSGGITFA CCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEHHCCCEEEECCCCHHHCCCCCCEEEE NNTVKQSDGYQSSIVQWFIQQQGGRNNFNEPALTAGWSYDNSNKYIFATDGGSFNLNGSV CCCEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCEEEEECCCEEEECCEE NIPVISNINAYKIEVGGTYNIAVPNTDMSALTIRAGVQYGGGYGKTKQLPFYENFYGGGW EEEEEECCCEEEEEECCEEEEEECCCCCCEEEEEECCEECCCCCCCCCCCCHHCCCCCCH GSVRGFLQGSLGPRDINLVNGEVGNSIGGNLNIYNNYDVLFPVPFIKDSSKMRIGAFLDI HHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEEECCEEEEECCCCCCCCCEEEEEEEEC GNTYTTYNLNGVVAPQPKQETTPSFSNLKYSVGVEFRWASPMGPLAVSFAQPFNVQKGDI CCEEEEEEECEEECCCCCCCCCCCHHCEEEEEEEEEEECCCCCCEEEEECCCCCCCCCCH TQVFQFSLGQNF HHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA