Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
---|---|
Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is gor [H]
Identifier: 89054555
GI number: 89054555
Start: 2072959
End: 2074275
Strand: Direct
Name: gor [H]
Synonym: Jann_2064
Alternate gene names: 89054555
Gene position: 2072959-2074275 (Clockwise)
Preceding gene: 89054554
Following gene: 89054558
Centisome position: 48.01
GC content: 63.33
Gene sequence:
>1317_bases ATGTCAGACACGTCTTTCGATGCCATCGTTATCGGTGCGGGATCAGGGGGGCTGTCGTTCGGCCAGACCGCCGCCAAACT CGGCGCCCGGGTGGCAGTGATCGAGAAAGATCGGTTGGGCGGCACTTGCGTGAACCGCGGATGTGTTCCCAAAAAGCTGA TGTGGACCCTGGCGCACGCGGTGAAGCAAAGCCGTGAACTGGCGACCCAAGGTATTCTGGAGGCCGCGCCAGCGATCAAT ATGGCGACGTTTCGCACCAAGAGCGATGCCCACGTGAATGGGATCGTCGACAGCTTCAACGAGACGCTGGATGACGCGGG TGTTGCCGTGTTTCGGGGCAGTGGTCTCATCTCCGCACCGGGTGAGATCACCCTGGGGGAGCAAATTCTTCGCGCGGACA AGATCGTTGTGGCCACCGGCGGCCGACCCGCGCGGCCCGACATTGACGGCGCGGAGCTGTGCAAGGTGTCCGACGATATC CTTGCCATGACAGATCTGCCGGACAGTATCGTGGTTGTCGGGGGCGGCTATATCGGGTGTGAGTTTGCCTCGATCCTTGC GGGGCTTGGGGTGGACGTGACGCTGGTGTCCGATGGGGATGCGGTGCTGACGGAATTTTCCGCCCCTTTGCAGATTCTGG CGGAGGCCAACCTGAAGGCGCAGGGATGCTCCGTCGTGCTGAACGCCCGTCCGCAGCGCGTGGAAAGGTCCGGCGACACC TTGCGCGTCACGCTGGAGGATGGCTCAACGCTTGATGTCGCAGATGTCTTGCTGGCCACGGGCCGCGCCCCGAACCTGGA TGTGCTGGGCGCACTGGCGGAGGACGTAAACTTGTCTGACAGCGGGCAAATCGACATCGACGACGGGTTTGCCACGTCTG TGCCGAACCTGTTTGCCATCGGCGATTGCACAACCCGGCTGCCGTTGACGCCGGTCGCCACCGATGATGGGCGGGTGTTG GCGCTCAACCTGTTTGGCGGCGGGGCTGATCCTGTCGCGACATCGCACATCGCCACGACCGCGTTCCTGATGCCGCCCCT GGCGGAGGTCGGCGCAACGGATGATCTTGCAAAGGGCACCGATTTTCAATCGCTCAGCGAAGGGGTCCTGTCATCCGGGC AGAAGCATGCCTGGCACGTCGCCCTTGACGGCGATCAGATCACCGGTCTCGCCTTCGCAGCCGACGGCGCGGGGGAGGCG GCAGGCTTCATGGCGCAGATTGTGGCGGCTGAGATGCCGCGCAAGACCGCCACGCAGGCTTTGCCCGTCCATCCTTCCTC CTCGGAAGAGATTTTCGACGCCCTCAAGACCGACTGA
Upstream 100 bases:
>100_bases ATCAGGGTATTCTTGCGCGTCGAAGGGAACCTGCTTGAGGTCCGGGAAGTTGGTCCCGGGAAGCGCCAGATGCGCGCCCT TCCAGCCAGTGAGATCTTCC
Downstream 100 bases:
>100_bases TCCGCGCCGAAAGGGTATATCGGAGATCACACAGGTGACGGGGGGAGATCCCGTCCGCCCCGATTGTGACCGGTGGCGCG GCAGATCTACGGCATGGGCT
Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Products: NA
Alternate protein names: GR; GRase [H]
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MSDTSFDAIVIGAGSGGLSFGQTAAKLGARVAVIEKDRLGGTCVNRGCVPKKLMWTLAHAVKQSRELATQGILEAAPAIN MATFRTKSDAHVNGIVDSFNETLDDAGVAVFRGSGLISAPGEITLGEQILRADKIVVATGGRPARPDIDGAELCKVSDDI LAMTDLPDSIVVVGGGYIGCEFASILAGLGVDVTLVSDGDAVLTEFSAPLQILAEANLKAQGCSVVLNARPQRVERSGDT LRVTLEDGSTLDVADVLLATGRAPNLDVLGALAEDVNLSDSGQIDIDDGFATSVPNLFAIGDCTTRLPLTPVATDDGRVL ALNLFGGGADPVATSHIATTAFLMPPLAEVGATDDLAKGTDFQSLSEGVLSSGQKHAWHVALDGDQITGLAFAADGAGEA AGFMAQIVAAEMPRKTATQALPVHPSSSEEIFDALKTD
Sequences:
>Translated_438_residues MSDTSFDAIVIGAGSGGLSFGQTAAKLGARVAVIEKDRLGGTCVNRGCVPKKLMWTLAHAVKQSRELATQGILEAAPAIN MATFRTKSDAHVNGIVDSFNETLDDAGVAVFRGSGLISAPGEITLGEQILRADKIVVATGGRPARPDIDGAELCKVSDDI LAMTDLPDSIVVVGGGYIGCEFASILAGLGVDVTLVSDGDAVLTEFSAPLQILAEANLKAQGCSVVLNARPQRVERSGDT LRVTLEDGSTLDVADVLLATGRAPNLDVLGALAEDVNLSDSGQIDIDDGFATSVPNLFAIGDCTTRLPLTPVATDDGRVL ALNLFGGGADPVATSHIATTAFLMPPLAEVGATDDLAKGTDFQSLSEGVLSSGQKHAWHVALDGDQITGLAFAADGAGEA AGFMAQIVAAEMPRKTATQALPVHPSSSEEIFDALKTD >Mature_437_residues SDTSFDAIVIGAGSGGLSFGQTAAKLGARVAVIEKDRLGGTCVNRGCVPKKLMWTLAHAVKQSRELATQGILEAAPAINM ATFRTKSDAHVNGIVDSFNETLDDAGVAVFRGSGLISAPGEITLGEQILRADKIVVATGGRPARPDIDGAELCKVSDDIL AMTDLPDSIVVVGGGYIGCEFASILAGLGVDVTLVSDGDAVLTEFSAPLQILAEANLKAQGCSVVLNARPQRVERSGDTL RVTLEDGSTLDVADVLLATGRAPNLDVLGALAEDVNLSDSGQIDIDDGFATSVPNLFAIGDCTTRLPLTPVATDDGRVLA LNLFGGGADPVATSHIATTAFLMPPLAEVGATDDLAKGTDFQSLSEGVLSSGQKHAWHVALDGDQITGLAFAADGAGEAA GFMAQIVAAEMPRKTATQALPVHPSSSEEIFDALKTD
Specific function: Maintains High Levels Of Reduced Glutathione In The Cytosol. [C]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI50301238, Length=455, Percent_Identity=31.2087912087912, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI22035672, Length=465, Percent_Identity=29.8924731182796, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI33519430, Length=462, Percent_Identity=25.7575757575758, Blast_Score=125, Evalue=6e-29, Organism=Homo sapiens, GI33519428, Length=462, Percent_Identity=25.7575757575758, Blast_Score=125, Evalue=6e-29, Organism=Homo sapiens, GI33519426, Length=462, Percent_Identity=25.7575757575758, Blast_Score=125, Evalue=6e-29, Organism=Homo sapiens, GI148277065, Length=462, Percent_Identity=25.7575757575758, Blast_Score=125, Evalue=6e-29, Organism=Homo sapiens, GI148277071, Length=462, Percent_Identity=25.7575757575758, Blast_Score=125, Evalue=7e-29, Organism=Homo sapiens, GI91199540, Length=382, Percent_Identity=28.2722513089005, Blast_Score=125, Evalue=7e-29, Organism=Homo sapiens, GI291045266, Length=445, Percent_Identity=26.7415730337079, Blast_Score=125, Evalue=1e-28, Organism=Homo sapiens, GI291045268, Length=430, Percent_Identity=26.7441860465116, Blast_Score=120, Evalue=2e-27, Organism=Escherichia coli, GI1789915, Length=431, Percent_Identity=31.322505800464, Blast_Score=177, Evalue=1e-45, Organism=Escherichia coli, GI87082354, Length=361, Percent_Identity=28.2548476454294, Blast_Score=135, Evalue=5e-33, Organism=Escherichia coli, GI87081717, Length=449, Percent_Identity=27.3942093541203, Blast_Score=133, Evalue=3e-32, Organism=Escherichia coli, GI1786307, Length=388, Percent_Identity=26.2886597938144, Blast_Score=128, Evalue=6e-31, Organism=Escherichia coli, GI1789065, Length=288, Percent_Identity=26.0416666666667, Blast_Score=70, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71983429, Length=444, Percent_Identity=31.0810810810811, Blast_Score=162, Evalue=4e-40, Organism=Caenorhabditis elegans, GI71983419, Length=444, Percent_Identity=31.0810810810811, Blast_Score=162, Evalue=4e-40, Organism=Caenorhabditis elegans, GI17557007, Length=469, Percent_Identity=28.997867803838, Blast_Score=151, Evalue=8e-37, Organism=Caenorhabditis elegans, GI32565766, Length=371, Percent_Identity=27.7628032345013, Blast_Score=122, Evalue=4e-28, Organism=Caenorhabditis elegans, GI71982272, Length=384, Percent_Identity=29.1666666666667, Blast_Score=119, Evalue=4e-27, Organism=Saccharomyces cerevisiae, GI6325166, Length=466, Percent_Identity=30.0429184549356, Blast_Score=179, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6321091, Length=386, Percent_Identity=28.2383419689119, Blast_Score=113, Evalue=7e-26, Organism=Saccharomyces cerevisiae, GI6325240, Length=375, Percent_Identity=25.3333333333333, Blast_Score=87, Evalue=7e-18, Organism=Drosophila melanogaster, GI17737741, Length=485, Percent_Identity=32.1649484536082, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI24640553, Length=485, Percent_Identity=30.9278350515464, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI24640549, Length=485, Percent_Identity=30.9278350515464, Blast_Score=159, Evalue=3e-39, Organism=Drosophila melanogaster, GI24640551, Length=485, Percent_Identity=30.9278350515464, Blast_Score=158, Evalue=6e-39, Organism=Drosophila melanogaster, GI21358499, Length=372, Percent_Identity=27.4193548387097, Blast_Score=129, Evalue=6e-30,
Paralogues:
None
Copy number: 650 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR006324 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.8.1.7 [H]
Molecular weight: Translated: 44934; Mature: 44803
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: PS00076 PYRIDINE_REDOX_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTSFDAIVIGAGSGGLSFGQTAAKLGARVAVIEKDRLGGTCVNRGCVPKKLMWTLAHA CCCCCCCEEEEECCCCCCCCCHHHHHHCCEEEEEECCCCCCCEECCCCCCHHHHHHHHHH VKQSRELATQGILEAAPAINMATFRTKSDAHVNGIVDSFNETLDDAGVAVFRGSGLISAP HHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEECCCEECCC GEITLGEQILRADKIVVATGGRPARPDIDGAELCKVSDDILAMTDLPDSIVVVGGGYIGC CCCCHHHHHHCCCEEEEEECCCCCCCCCCHHHHHCCCCCEEEEECCCCCEEEEECCCHHH EFASILAGLGVDVTLVSDGDAVLTEFSAPLQILAEANLKAQGCSVVLNARPQRVERSGDT HHHHHHHCCCCEEEEECCCCCEEHHHCCCCEEHHHCCCCCCCCEEEECCCCHHHHCCCCE LRVTLEDGSTLDVADVLLATGRAPNLDVLGALAEDVNLSDSGQIDIDDGFATSVPNLFAI EEEEECCCCEEHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCEEEE GDCTTRLPLTPVATDDGRVLALNLFGGGADPVATSHIATTAFLMPPLAEVGATDDLAKGT CCCCCCCCCCEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCC DFQSLSEGVLSSGQKHAWHVALDGDQITGLAFAADGAGEAAGFMAQIVAAEMPRKTATQA CHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHCCE LPVHPSSSEEIFDALKTD ECCCCCCHHHHHHHHCCC >Mature Secondary Structure SDTSFDAIVIGAGSGGLSFGQTAAKLGARVAVIEKDRLGGTCVNRGCVPKKLMWTLAHA CCCCCCEEEEECCCCCCCCCHHHHHHCCEEEEEECCCCCCCEECCCCCCHHHHHHHHHH VKQSRELATQGILEAAPAINMATFRTKSDAHVNGIVDSFNETLDDAGVAVFRGSGLISAP HHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEECCCEECCC GEITLGEQILRADKIVVATGGRPARPDIDGAELCKVSDDILAMTDLPDSIVVVGGGYIGC CCCCHHHHHHCCCEEEEEECCCCCCCCCCHHHHHCCCCCEEEEECCCCCEEEEECCCHHH EFASILAGLGVDVTLVSDGDAVLTEFSAPLQILAEANLKAQGCSVVLNARPQRVERSGDT HHHHHHHCCCCEEEEECCCCCEEHHHCCCCEEHHHCCCCCCCCEEEECCCCHHHHCCCCE LRVTLEDGSTLDVADVLLATGRAPNLDVLGALAEDVNLSDSGQIDIDDGFATSVPNLFAI EEEEECCCCEEHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCEEEE GDCTTRLPLTPVATDDGRVLALNLFGGGADPVATSHIATTAFLMPPLAEVGATDDLAKGT CCCCCCCCCCEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCC DFQSLSEGVLSSGQKHAWHVALDGDQITGLAFAADGAGEAAGFMAQIVAAEMPRKTATQA CHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHCCE LPVHPSSSEEIFDALKTD ECCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7538273 [H]