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The map label for this gene is 89054558

Identifier: 89054558

GI number: 89054558

Start: 2076061

End: 2077296

Strand: Direct

Name: 89054558

Synonym: Jann_2067

Alternate gene names: NA

Gene position: 2076061-2077296 (Clockwise)

Preceding gene: 89054555

Following gene: 89054559

Centisome position: 48.08

GC content: 61.25

Gene sequence:

>1236_bases
ATGACAAAGTTGAACATGACTGAAAAACTCGCGATCCTCAGCGATGCCGCGAAATATGACGCGTCGTGTGCGTCCTCGGG
ATCGACCCGGCGGGACTCGCGCGATGGCAAAAGCCTGGGCTCGAATGAGGGCAGCGGTATTTGCCACGCCTACGCGCCAG
ACGGGCGCTGCATCAGCCTGCTGAAGATCCTGATGACGAATTTCTGCATTTATGACTGCGCCTATTGCATCAACCGCGTG
TCCTCCAACGTCGCCCGCGCGCGGTTTTCGGTGGATGAGGTGGTGAAACTGACGATCGAGTTCTACCGCCGCAACTACAT
CGAAGGTCTGTTTCTGTCGTCCGGCGTCATCAAGTCGCCCGACGCGACGATGGAAGCGATGGTGCAGATTGCCCGCCGCC
TGCGTCATGAAGAGAATTTTCGAGGGTATATTCACCTGAAGACCATACCGGATGCGGCCCCTGACCTGATCGCGGAGGCG
GGGCTGCTGGCCGACCGCCTCTCCATCAATGTGGAGCTGCCCACCGATGCCGCCGTCACCCAATACGCGCCCGAAAAGAA
GCCGGAACAGATCCGCAAAGCCATGGCGGATGTGCGTCTGCGCAAGCAGGGGGCGGCGGACAAATCGCACACCGGCAAGC
GGCCCCCGCGTTTCGCGCCTGCGGGGCAATCGACGCAAATGATCATCGGCGCGGACGGGTCGAACGACGCGACGGTTCTG
GGCCAATCCACACGGCTCTACTCCAGCTACAAGCTGAAGCGCGTGTATTATTCTGCGTTCTCACCCATTCCTGACAGCTC
TGCCAAACTGCCATTGGTGCGCCCGCCGTTGCAGCGCGAACACCGGCTCTATCAGGCGGATTGGTTGCTTCGATTCTACG
GGTTTGATCTGGATGAGATCACGGCGGTGACGCCGGACGGCAATCTGGATCTACAGATTGACCCGAAAATGGCATGGGCT
CTGGCCCATCGCGGGGTGTTTCCCCTGGACGTCAACACGGCCCCGCAGGAGATGTTGCTGCGGGTTCCGGGCTTCGGCGT
GAAGACCGTCAAGCGCATCCTGTCCACTCGCCGCCATCGCACGCTGCGATACGATGATATCACGCGGATGGGGGCCTCGA
TGAAAAAGGCGCGGGCGTTTGTGACAGCGGGTGGGTGGAGCCCCGGCGCGCTGACCGACAGCGTGAATCTGCGGGCACGG
TTCGCGCCCCCGCCCGAGCAGTTGACGCTTCTATGA

Upstream 100 bases:

>100_bases
TGCCCCGATGGTTCCACGTGCCTGCGCCGTGATCTGCATTTTTCACCCCCGATTAACCTATCTTGTTGTCGGAGCGCGCA
GAAGAACATAATAAGAACAT

Downstream 100 bases:

>100_bases
CGTAGCATGTGGTCTTGCCGCGGATCGGGACGGCGAAGGCTTGGCGCGATGCGGCACGGGGGCTGTTGGCCAGAGGCGTC
GCGCCCGCCGAGGTGACCTG

Product: radical SAM family protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Radical SAM Family Protein; Elongator /MiaB/NifB; Radical Sam Domain Protein; Radical SAM; Radical SAM Superfamily Protein; Biotin Synthase Related Domain-Containing Protein; Biotin Synthase Related Domain Containing Protein; Elongator Protein; Radical SAM Methylase Protein; Helix-Hairpin-Helix Motif; Radical SAM Protein

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MTKLNMTEKLAILSDAAKYDASCASSGSTRRDSRDGKSLGSNEGSGICHAYAPDGRCISLLKILMTNFCIYDCAYCINRV
SSNVARARFSVDEVVKLTIEFYRRNYIEGLFLSSGVIKSPDATMEAMVQIARRLRHEENFRGYIHLKTIPDAAPDLIAEA
GLLADRLSINVELPTDAAVTQYAPEKKPEQIRKAMADVRLRKQGAADKSHTGKRPPRFAPAGQSTQMIIGADGSNDATVL
GQSTRLYSSYKLKRVYYSAFSPIPDSSAKLPLVRPPLQREHRLYQADWLLRFYGFDLDEITAVTPDGNLDLQIDPKMAWA
LAHRGVFPLDVNTAPQEMLLRVPGFGVKTVKRILSTRRHRTLRYDDITRMGASMKKARAFVTAGGWSPGALTDSVNLRAR
FAPPPEQLTLL

Sequences:

>Translated_411_residues
MTKLNMTEKLAILSDAAKYDASCASSGSTRRDSRDGKSLGSNEGSGICHAYAPDGRCISLLKILMTNFCIYDCAYCINRV
SSNVARARFSVDEVVKLTIEFYRRNYIEGLFLSSGVIKSPDATMEAMVQIARRLRHEENFRGYIHLKTIPDAAPDLIAEA
GLLADRLSINVELPTDAAVTQYAPEKKPEQIRKAMADVRLRKQGAADKSHTGKRPPRFAPAGQSTQMIIGADGSNDATVL
GQSTRLYSSYKLKRVYYSAFSPIPDSSAKLPLVRPPLQREHRLYQADWLLRFYGFDLDEITAVTPDGNLDLQIDPKMAWA
LAHRGVFPLDVNTAPQEMLLRVPGFGVKTVKRILSTRRHRTLRYDDITRMGASMKKARAFVTAGGWSPGALTDSVNLRAR
FAPPPEQLTLL
>Mature_410_residues
TKLNMTEKLAILSDAAKYDASCASSGSTRRDSRDGKSLGSNEGSGICHAYAPDGRCISLLKILMTNFCIYDCAYCINRVS
SNVARARFSVDEVVKLTIEFYRRNYIEGLFLSSGVIKSPDATMEAMVQIARRLRHEENFRGYIHLKTIPDAAPDLIAEAG
LLADRLSINVELPTDAAVTQYAPEKKPEQIRKAMADVRLRKQGAADKSHTGKRPPRFAPAGQSTQMIIGADGSNDATVLG
QSTRLYSSYKLKRVYYSAFSPIPDSSAKLPLVRPPLQREHRLYQADWLLRFYGFDLDEITAVTPDGNLDLQIDPKMAWAL
AHRGVFPLDVNTAPQEMLLRVPGFGVKTVKRILSTRRHRTLRYDDITRMGASMKKARAFVTAGGWSPGALTDSVNLRARF
APPPEQLTLL

Specific function: Unknown

COG id: COG4277

COG function: function code R; Predicted DNA-binding protein with the Helix-hairpin-helix motif

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45603; Mature: 45472

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKLNMTEKLAILSDAAKYDASCASSGSTRRDSRDGKSLGSNEGSGICHAYAPDGRCISL
CCCCCCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHH
LKILMTNFCIYDCAYCINRVSSNVARARFSVDEVVKLTIEFYRRNYIEGLFLSSGVIKSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DATMEAMVQIARRLRHEENFRGYIHLKTIPDAAPDLIAEAGLLADRLSINVELPTDAAVT
CHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHEEEEEEEEECCCCCHHH
QYAPEKKPEQIRKAMADVRLRKQGAADKSHTGKRPPRFAPAGQSTQMIIGADGSNDATVL
HCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEE
GQSTRLYSSYKLKRVYYSAFSPIPDSSAKLPLVRPPLQREHRLYQADWLLRFYGFDLDEI
ECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHE
TAVTPDGNLDLQIDPKMAWALAHRGVFPLDVNTAPQEMLLRVPGFGVKTVKRILSTRRHR
EEECCCCCEEEEECCHHHHHHHHCCCCEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHC
TLRYDDITRMGASMKKARAFVTAGGWSPGALTDSVNLRARFAPPPEQLTLL
CCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCEEEECCCCCHHEECC
>Mature Secondary Structure 
TKLNMTEKLAILSDAAKYDASCASSGSTRRDSRDGKSLGSNEGSGICHAYAPDGRCISL
CCCCCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHH
LKILMTNFCIYDCAYCINRVSSNVARARFSVDEVVKLTIEFYRRNYIEGLFLSSGVIKSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DATMEAMVQIARRLRHEENFRGYIHLKTIPDAAPDLIAEAGLLADRLSINVELPTDAAVT
CHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHEEEEEEEEECCCCCHHH
QYAPEKKPEQIRKAMADVRLRKQGAADKSHTGKRPPRFAPAGQSTQMIIGADGSNDATVL
HCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEE
GQSTRLYSSYKLKRVYYSAFSPIPDSSAKLPLVRPPLQREHRLYQADWLLRFYGFDLDEI
ECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHE
TAVTPDGNLDLQIDPKMAWALAHRGVFPLDVNTAPQEMLLRVPGFGVKTVKRILSTRRHR
EEECCCCCEEEEECCHHHHHHHHCCCCEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHC
TLRYDDITRMGASMKKARAFVTAGGWSPGALTDSVNLRARFAPPPEQLTLL
CCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCEEEECCCCCHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA