Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054552

Identifier: 89054552

GI number: 89054552

Start: 2070313

End: 2070606

Strand: Direct

Name: 89054552

Synonym: Jann_2061

Alternate gene names: NA

Gene position: 2070313-2070606 (Clockwise)

Preceding gene: 89054549

Following gene: 89054553

Centisome position: 47.95

GC content: 57.14

Gene sequence:

>294_bases
ATGGACCCTGGATCGACCTCTGCTATTTTGTCCTGTCATGGGATTGATCTGCACCGGTCGCCTCCCGTCTGCGGGATCGG
AACCATCCTCAACGCTGCACGTTACTCTGTCACATACCGCCTTTGCCGATGGTCACATCTGAAAATAGACCGTCACGCGC
TGTGCCGCATCGAACTGTGGTCGCATTTGGGGGGCTGGCAGGTGCCCAAACGGGTGTTCAGAAACAGGGTCGTGTCGGGC
TATATCGATGGCGAACCCGCCGGTGATCGTAAGCGGATCCTTGATCGAGGATGA

Upstream 100 bases:

>100_bases
ATTCGGCTGGGATTGGTGAATGTTGGCCAAGATATGTCTCATGACATGTTTAACGCGCGGTCCGGTCCCGCGGTTCCATG
GGTGATGCGGAAGATGCGAC

Downstream 100 bases:

>100_bases
CAATCATGGCGCTATGTCGTGCGTACTGGTGGGGCACGTCGATATGAGGTCGTCCGAGCGAGGGATCGGATGGATGCTGC
TTGGATGCGACAGAAATGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MDPGSTSAILSCHGIDLHRSPPVCGIGTILNAARYSVTYRLCRWSHLKIDRHALCRIELWSHLGGWQVPKRVFRNRVVSG
YIDGEPAGDRKRILDRG

Sequences:

>Translated_97_residues
MDPGSTSAILSCHGIDLHRSPPVCGIGTILNAARYSVTYRLCRWSHLKIDRHALCRIELWSHLGGWQVPKRVFRNRVVSG
YIDGEPAGDRKRILDRG
>Mature_97_residues
MDPGSTSAILSCHGIDLHRSPPVCGIGTILNAARYSVTYRLCRWSHLKIDRHALCRIELWSHLGGWQVPKRVFRNRVVSG
YIDGEPAGDRKRILDRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10937; Mature: 10937

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPGSTSAILSCHGIDLHRSPPVCGIGTILNAARYSVTYRLCRWSHLKIDRHALCRIELW
CCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHH
SHLGGWQVPKRVFRNRVVSGYIDGEPAGDRKRILDRG
HCCCCCCHHHHHHHHHHHEEEECCCCCCCHHHHCCCC
>Mature Secondary Structure
MDPGSTSAILSCHGIDLHRSPPVCGIGTILNAARYSVTYRLCRWSHLKIDRHALCRIELW
CCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHH
SHLGGWQVPKRVFRNRVVSGYIDGEPAGDRKRILDRG
HCCCCCCHHHHHHHHHHHEEEECCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA