Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054487
Identifier: 89054487
GI number: 89054487
Start: 1996575
End: 1996955
Strand: Direct
Name: 89054487
Synonym: Jann_1996
Alternate gene names: NA
Gene position: 1996575-1996955 (Clockwise)
Preceding gene: 89054486
Following gene: 89054488
Centisome position: 46.24
GC content: 65.88
Gene sequence:
>381_bases GTGAGCCTTTATGGTGCACTTTACACCGCCGCGGGCGTGTTCGCGCTGCTGTTGGGGGTGGTGCTTATTCTGATCCCGCA GCTTTACCTGTCGCTATACGTGGCCCTCTACGACCCGGCCATGGCCTTTCCGGCACAGCGGCTTGGGCCCGCAGTCATTG GCCTTGGCGCGCTGCTGCTCTTGGCCCGGGACCTGCCCGACGGCCCTTTTGCGTCGCGGTTTGCAGGCCTGTCCGCGCTG GTATGGTTCGCCGTAGCCGCCACGGGCGTTTTCCACTACGCCACCGGCGTGGCGACCTCCGCCATTCTCGTCGCTGCGGC AATTGAGGTGGCCCTTGGATTGCTGTTCGTGCTGGCGGCCCGCACGAAGCGCGCGACCTGA
Upstream 100 bases:
>100_bases GGACCCACGTGGCACGGACCTCCGAGATCGGGAAACTTGCCATCACCAAGGTGGAGAACAAGGGCAAGCAGAACCGTCGC GTCACAATCGAGTTCGCGTC
Downstream 100 bases:
>100_bases GAAGAGCTGCAGAAATTCGGGCGGGAACGCGCCGTGGCAGGGCGGTGATTTTTATCAGCAACACCTCTTGCCATGCCGCC CCCATAGCCGTTAAACGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MSLYGALYTAAGVFALLLGVVLILIPQLYLSLYVALYDPAMAFPAQRLGPAVIGLGALLLLARDLPDGPFASRFAGLSAL VWFAVAATGVFHYATGVATSAILVAAAIEVALGLLFVLAARTKRAT
Sequences:
>Translated_126_residues MSLYGALYTAAGVFALLLGVVLILIPQLYLSLYVALYDPAMAFPAQRLGPAVIGLGALLLLARDLPDGPFASRFAGLSAL VWFAVAATGVFHYATGVATSAILVAAAIEVALGLLFVLAARTKRAT >Mature_125_residues SLYGALYTAAGVFALLLGVVLILIPQLYLSLYVALYDPAMAFPAQRLGPAVIGLGALLLLARDLPDGPFASRFAGLSALV WFAVAATGVFHYATGVATSAILVAAAIEVALGLLFVLAARTKRAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13009; Mature: 12878
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLYGALYTAAGVFALLLGVVLILIPQLYLSLYVALYDPAMAFPAQRLGPAVIGLGALLL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LARDLPDGPFASRFAGLSALVWFAVAATGVFHYATGVATSAILVAAAIEVALGLLFVLAA HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTKRAT HHHCCC >Mature Secondary Structure SLYGALYTAAGVFALLLGVVLILIPQLYLSLYVALYDPAMAFPAQRLGPAVIGLGALLL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LARDLPDGPFASRFAGLSALVWFAVAATGVFHYATGVATSAILVAAAIEVALGLLFVLAA HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTKRAT HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA