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The map label for this gene is 89054488

Identifier: 89054488

GI number: 89054488

Start: 1997294

End: 1998562

Strand: Direct

Name: 89054488

Synonym: Jann_1997

Alternate gene names: NA

Gene position: 1997294-1998562 (Clockwise)

Preceding gene: 89054487

Following gene: 89054491

Centisome position: 46.26

GC content: 60.91

Gene sequence:

>1269_bases
ATGGGCATTGCAAAGAGAGGCCGTCTCTATCACCTCCGACGCCGCGTCCCGCGCCGGTATTGCGGGGTTGAGCCGCGCGA
AACCGTGTGGATCAGCCTGCACACTGACTCTGAGACAGTGGCCATGAGCAAGGCGGACCGCGCATGGAGCCAGATGATTG
AGGCTTGGGAAGCACGTTTGGCCGGGAACAGTGACGATGCAGAGGCGCGATACGAGGCAGCGCGTGACCTGGCTCGGGTT
CGAGGCTTTCGGTATCTGGACGTCGGTGCCGTCGCGAAGTTACCTGTAGAAGACGTTGTCGAGCGTGTGGAAGCAATTCC
AGCCACGATGGATCAACTGGACGCCATTGAGGGCGCTGCTCTTCTTGGAGCGGCTCCTGAGCCTTGTACAACGGTCACAA
AGACGCTAGAGCTATACTGGACGCTTGCCCGTGAGAAGACCTTTGGCAAAAGCGAAGACCAACTGCGCCGTTGGGAGGCG
CCCCGCAAGAAGGCTATCAAGAACTTCGTTGCCATCGTCGGCGACAAGGACATCGCCAACATCACCCGCGACGACATGCT
GGACTTCCGCCAGCACTGGCTCGACCGGATCGAGGCCGGCGAGGTCACGGCGAACTCGGCCAACAAGGACCTGATCCATC
TCGGCGACGTGCTTAAGACCGTGAACACGATGAAGCGGTTGGGGCTCATGCTGCCCTTGGGCGAGTTATCCTTCAAGCAG
GGTGAGGCGCGAACCCGCCCACCGTTCAGCGAAGACTGGATCACAACGCGGTTGCTGGCCCCGGGCGCGCTGGACGGATT
GAACGACCAAGCGCGCGGCATCTTACTGGGGATGGTGAACACCGGCTATCGCCCATCCGAGGGGGCCGCGTTGACGGCAG
ACACGATCCGGCTCGATTGCGACGTGCCGCATATTTCGATTGAAGCTGATGGCCGTCAGCTGAAGTCACACTTCGCCCGG
CGGGTGATCCCTCTGGCTGGCGCTTCGTTAGAGGCCTTCAAGCAATTCCCTGACGGCTTCCCCCGCTACCGCAACAGCGC
CAGCCTAAGCGCGGTGGTTAACAAGTTCCTCCGCACCAACGGCCTGCTCGAAACCCCGCGTCACTCATTTTACTCGCTCC
GGCACTCCTTCGAGGATCGCATGCTCGCCGCCGGGATCGACGACCGGATAAGGCGGGATTTGTTTGGTCATCGATTAGAT
CGGGAACGGTACGGAAAAGGTGCGTCGCTCGAACATGTCGCCGAACTCGTCGGTCGGGTCGCTTTCTGA

Upstream 100 bases:

>100_bases
TGAAATTCGGCGTTTTCGCGCTTACGACGTCTCTCGGTCCGCTTGATTTGCTGCACATCTTGCTACACAATTTGCTGCAC
ATTCGGGAGTTTTCTCCGCC

Downstream 100 bases:

>100_bases
GCGAGGAGCGCCCGCGCCCGGCGCTGCGCTTCTGACATCCGGTTCTCCTCCTTCACGGTCGCGGCCAACTCCGCTTCCAA
CCGCTCGAAGACCGGCGCGA

Product: phage integrase

Products: NA

Alternate protein names: Phage Integrase Family Protein; Integrase Family Protein; Phage Integrase Family Site Specific Recombinase; Site-Specific Recombinase Phage Integrase Family Protein; Phage Integrase Protein

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MGIAKRGRLYHLRRRVPRRYCGVEPRETVWISLHTDSETVAMSKADRAWSQMIEAWEARLAGNSDDAEARYEAARDLARV
RGFRYLDVGAVAKLPVEDVVERVEAIPATMDQLDAIEGAALLGAAPEPCTTVTKTLELYWTLAREKTFGKSEDQLRRWEA
PRKKAIKNFVAIVGDKDIANITRDDMLDFRQHWLDRIEAGEVTANSANKDLIHLGDVLKTVNTMKRLGLMLPLGELSFKQ
GEARTRPPFSEDWITTRLLAPGALDGLNDQARGILLGMVNTGYRPSEGAALTADTIRLDCDVPHISIEADGRQLKSHFAR
RVIPLAGASLEAFKQFPDGFPRYRNSASLSAVVNKFLRTNGLLETPRHSFYSLRHSFEDRMLAAGIDDRIRRDLFGHRLD
RERYGKGASLEHVAELVGRVAF

Sequences:

>Translated_422_residues
MGIAKRGRLYHLRRRVPRRYCGVEPRETVWISLHTDSETVAMSKADRAWSQMIEAWEARLAGNSDDAEARYEAARDLARV
RGFRYLDVGAVAKLPVEDVVERVEAIPATMDQLDAIEGAALLGAAPEPCTTVTKTLELYWTLAREKTFGKSEDQLRRWEA
PRKKAIKNFVAIVGDKDIANITRDDMLDFRQHWLDRIEAGEVTANSANKDLIHLGDVLKTVNTMKRLGLMLPLGELSFKQ
GEARTRPPFSEDWITTRLLAPGALDGLNDQARGILLGMVNTGYRPSEGAALTADTIRLDCDVPHISIEADGRQLKSHFAR
RVIPLAGASLEAFKQFPDGFPRYRNSASLSAVVNKFLRTNGLLETPRHSFYSLRHSFEDRMLAAGIDDRIRRDLFGHRLD
RERYGKGASLEHVAELVGRVAF
>Mature_421_residues
GIAKRGRLYHLRRRVPRRYCGVEPRETVWISLHTDSETVAMSKADRAWSQMIEAWEARLAGNSDDAEARYEAARDLARVR
GFRYLDVGAVAKLPVEDVVERVEAIPATMDQLDAIEGAALLGAAPEPCTTVTKTLELYWTLAREKTFGKSEDQLRRWEAP
RKKAIKNFVAIVGDKDIANITRDDMLDFRQHWLDRIEAGEVTANSANKDLIHLGDVLKTVNTMKRLGLMLPLGELSFKQG
EARTRPPFSEDWITTRLLAPGALDGLNDQARGILLGMVNTGYRPSEGAALTADTIRLDCDVPHISIEADGRQLKSHFARR
VIPLAGASLEAFKQFPDGFPRYRNSASLSAVVNKFLRTNGLLETPRHSFYSLRHSFEDRMLAAGIDDRIRRDLFGHRLDR
ERYGKGASLEHVAELVGRVAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47405; Mature: 47273

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIAKRGRLYHLRRRVPRRYCGVEPRETVWISLHTDSETVAMSKADRAWSQMIEAWEARL
CCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
AGNSDDAEARYEAARDLARVRGFRYLDVGAVAKLPVEDVVERVEAIPATMDQLDAIEGAA
CCCCCCHHHHHHHHHHHHHHCCCEEECCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCHH
LLGAAPEPCTTVTKTLELYWTLAREKTFGKSEDQLRRWEAPRKKAIKNFVAIVGDKDIAN
HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCHHHH
ITRDDMLDFRQHWLDRIEAGEVTANSANKDLIHLGDVLKTVNTMKRLGLMLPLGELSFKQ
CCHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GEARTRPPFSEDWITTRLLAPGALDGLNDQARGILLGMVNTGYRPSEGAALTADTIRLDC
CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECEEEEEC
DVPHISIEADGRQLKSHFARRVIPLAGASLEAFKQFPDGFPRYRNSASLSAVVNKFLRTN
CCCEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHC
GLLETPRHSFYSLRHSFEDRMLAAGIDDRIRRDLFGHRLDRERYGKGASLEHVAELVGRV
CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHC
AF
CC
>Mature Secondary Structure 
GIAKRGRLYHLRRRVPRRYCGVEPRETVWISLHTDSETVAMSKADRAWSQMIEAWEARL
CCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
AGNSDDAEARYEAARDLARVRGFRYLDVGAVAKLPVEDVVERVEAIPATMDQLDAIEGAA
CCCCCCHHHHHHHHHHHHHHCCCEEECCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCHH
LLGAAPEPCTTVTKTLELYWTLAREKTFGKSEDQLRRWEAPRKKAIKNFVAIVGDKDIAN
HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCHHHH
ITRDDMLDFRQHWLDRIEAGEVTANSANKDLIHLGDVLKTVNTMKRLGLMLPLGELSFKQ
CCHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GEARTRPPFSEDWITTRLLAPGALDGLNDQARGILLGMVNTGYRPSEGAALTADTIRLDC
CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECEEEEEC
DVPHISIEADGRQLKSHFARRVIPLAGASLEAFKQFPDGFPRYRNSASLSAVVNKFLRTN
CCCEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHC
GLLETPRHSFYSLRHSFEDRMLAAGIDDRIRRDLFGHRLDRERYGKGASLEHVAELVGRV
CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHC
AF
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA