Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
---|---|
Accession | NC_007802 |
Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is 89054476
Identifier: 89054476
GI number: 89054476
Start: 1982894
End: 1983490
Strand: Reverse
Name: 89054476
Synonym: Jann_1985
Alternate gene names: NA
Gene position: 1983490-1982894 (Counterclockwise)
Preceding gene: 89054489
Following gene: 89054470
Centisome position: 45.94
GC content: 62.81
Gene sequence:
>597_bases GTGTTGGTGTTTTGGAAGGCACGTTTGGTGTTGTTGGCCGTCCCGAAGACCGGAACGACCGCGCTGGAAGACGCGCTTCT GCCTCATGCGGATTCGGCGATTTTGAACCCGCCGCAGCAGAAACACTGCACTGTGCGACGCTACCGCACCCAATTGCAGC CGTTTTTTGAGCAACGCGGTCAGCGCAAGTTGGAACTGATGGCCGTGGTGCGAGAGCCCGTTGACTGGCTGTCGAGCTGG TATCGCTACCGCGCCCGGGACCAGATCGTGGGCCACGCCAATTCCACTGCGGAGGTCACATTTGACACCTTCGTGGATGC CTGGCTGCAAGATGACCCGCCCGATTACGCCAAGGTCGGGCGGCAATCGCGGTTTGTGTCGGAGGGAGATGGCTCTCTCG GTGTCGACCACCTCTTTCGCCACGACCAATTGCACGAGGCGGTCGCGTTTCTGGAAGACCGAGTGCAGGCGACGCTGGAT GTGGGGCGCAGCAACGTGTCGCCCGCCCGAGACGCGGTGCTGAGTGCCGAGATGGAGGCCCGTCTGCACGCCGAGGCACC GGAGGAATTCGCGCTCTGGGCTCGTCTGGGGGGGTAA
Upstream 100 bases:
>100_bases ACAAGAACAATACAAGTTAATTCTTCGGTGCTGTGATCTTTCACGACGAGACGTTAAAAATTAGTTACACAAAAATGAGA AATTGGGTGGGGGTAGTGGC
Downstream 100 bases:
>100_bases GCGGCTCTACTGGAGCTGTTGGCGCACCGTCTCCGTCAAGTCGGTGAGCGAGAACGGCTTCGGCAGGAAAACCGACCCCT CAACCCCAATCGACCCCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MLVFWKARLVLLAVPKTGTTALEDALLPHADSAILNPPQQKHCTVRRYRTQLQPFFEQRGQRKLELMAVVREPVDWLSSW YRYRARDQIVGHANSTAEVTFDTFVDAWLQDDPPDYAKVGRQSRFVSEGDGSLGVDHLFRHDQLHEAVAFLEDRVQATLD VGRSNVSPARDAVLSAEMEARLHAEAPEEFALWARLGG
Sequences:
>Translated_198_residues MLVFWKARLVLLAVPKTGTTALEDALLPHADSAILNPPQQKHCTVRRYRTQLQPFFEQRGQRKLELMAVVREPVDWLSSW YRYRARDQIVGHANSTAEVTFDTFVDAWLQDDPPDYAKVGRQSRFVSEGDGSLGVDHLFRHDQLHEAVAFLEDRVQATLD VGRSNVSPARDAVLSAEMEARLHAEAPEEFALWARLGG >Mature_198_residues MLVFWKARLVLLAVPKTGTTALEDALLPHADSAILNPPQQKHCTVRRYRTQLQPFFEQRGQRKLELMAVVREPVDWLSSW YRYRARDQIVGHANSTAEVTFDTFVDAWLQDDPPDYAKVGRQSRFVSEGDGSLGVDHLFRHDQLHEAVAFLEDRVQATLD VGRSNVSPARDAVLSAEMEARLHAEAPEEFALWARLGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22450; Mature: 22450
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVFWKARLVLLAVPKTGTTALEDALLPHADSAILNPPQQKHCTVRRYRTQLQPFFEQRG CEEEEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC QRKLELMAVVREPVDWLSSWYRYRARDQIVGHANSTAEVTFDTFVDAWLQDDPPDYAKVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCCCHHHHHC RQSRFVSEGDGSLGVDHLFRHDQLHEAVAFLEDRVQATLDVGRSNVSPARDAVLSAEMEA HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH RLHAEAPEEFALWARLGG HHCCCCCHHHHHHHHCCC >Mature Secondary Structure MLVFWKARLVLLAVPKTGTTALEDALLPHADSAILNPPQQKHCTVRRYRTQLQPFFEQRG CEEEEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC QRKLELMAVVREPVDWLSSWYRYRARDQIVGHANSTAEVTFDTFVDAWLQDDPPDYAKVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCCCHHHHHC RQSRFVSEGDGSLGVDHLFRHDQLHEAVAFLEDRVQATLDVGRSNVSPARDAVLSAEMEA HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH RLHAEAPEEFALWARLGG HHCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA