Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054476

Identifier: 89054476

GI number: 89054476

Start: 1982894

End: 1983490

Strand: Reverse

Name: 89054476

Synonym: Jann_1985

Alternate gene names: NA

Gene position: 1983490-1982894 (Counterclockwise)

Preceding gene: 89054489

Following gene: 89054470

Centisome position: 45.94

GC content: 62.81

Gene sequence:

>597_bases
GTGTTGGTGTTTTGGAAGGCACGTTTGGTGTTGTTGGCCGTCCCGAAGACCGGAACGACCGCGCTGGAAGACGCGCTTCT
GCCTCATGCGGATTCGGCGATTTTGAACCCGCCGCAGCAGAAACACTGCACTGTGCGACGCTACCGCACCCAATTGCAGC
CGTTTTTTGAGCAACGCGGTCAGCGCAAGTTGGAACTGATGGCCGTGGTGCGAGAGCCCGTTGACTGGCTGTCGAGCTGG
TATCGCTACCGCGCCCGGGACCAGATCGTGGGCCACGCCAATTCCACTGCGGAGGTCACATTTGACACCTTCGTGGATGC
CTGGCTGCAAGATGACCCGCCCGATTACGCCAAGGTCGGGCGGCAATCGCGGTTTGTGTCGGAGGGAGATGGCTCTCTCG
GTGTCGACCACCTCTTTCGCCACGACCAATTGCACGAGGCGGTCGCGTTTCTGGAAGACCGAGTGCAGGCGACGCTGGAT
GTGGGGCGCAGCAACGTGTCGCCCGCCCGAGACGCGGTGCTGAGTGCCGAGATGGAGGCCCGTCTGCACGCCGAGGCACC
GGAGGAATTCGCGCTCTGGGCTCGTCTGGGGGGGTAA

Upstream 100 bases:

>100_bases
ACAAGAACAATACAAGTTAATTCTTCGGTGCTGTGATCTTTCACGACGAGACGTTAAAAATTAGTTACACAAAAATGAGA
AATTGGGTGGGGGTAGTGGC

Downstream 100 bases:

>100_bases
GCGGCTCTACTGGAGCTGTTGGCGCACCGTCTCCGTCAAGTCGGTGAGCGAGAACGGCTTCGGCAGGAAAACCGACCCCT
CAACCCCAATCGACCCCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MLVFWKARLVLLAVPKTGTTALEDALLPHADSAILNPPQQKHCTVRRYRTQLQPFFEQRGQRKLELMAVVREPVDWLSSW
YRYRARDQIVGHANSTAEVTFDTFVDAWLQDDPPDYAKVGRQSRFVSEGDGSLGVDHLFRHDQLHEAVAFLEDRVQATLD
VGRSNVSPARDAVLSAEMEARLHAEAPEEFALWARLGG

Sequences:

>Translated_198_residues
MLVFWKARLVLLAVPKTGTTALEDALLPHADSAILNPPQQKHCTVRRYRTQLQPFFEQRGQRKLELMAVVREPVDWLSSW
YRYRARDQIVGHANSTAEVTFDTFVDAWLQDDPPDYAKVGRQSRFVSEGDGSLGVDHLFRHDQLHEAVAFLEDRVQATLD
VGRSNVSPARDAVLSAEMEARLHAEAPEEFALWARLGG
>Mature_198_residues
MLVFWKARLVLLAVPKTGTTALEDALLPHADSAILNPPQQKHCTVRRYRTQLQPFFEQRGQRKLELMAVVREPVDWLSSW
YRYRARDQIVGHANSTAEVTFDTFVDAWLQDDPPDYAKVGRQSRFVSEGDGSLGVDHLFRHDQLHEAVAFLEDRVQATLD
VGRSNVSPARDAVLSAEMEARLHAEAPEEFALWARLGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22450; Mature: 22450

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVFWKARLVLLAVPKTGTTALEDALLPHADSAILNPPQQKHCTVRRYRTQLQPFFEQRG
CEEEEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
QRKLELMAVVREPVDWLSSWYRYRARDQIVGHANSTAEVTFDTFVDAWLQDDPPDYAKVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCCCHHHHHC
RQSRFVSEGDGSLGVDHLFRHDQLHEAVAFLEDRVQATLDVGRSNVSPARDAVLSAEMEA
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
RLHAEAPEEFALWARLGG
HHCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MLVFWKARLVLLAVPKTGTTALEDALLPHADSAILNPPQQKHCTVRRYRTQLQPFFEQRG
CEEEEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
QRKLELMAVVREPVDWLSSWYRYRARDQIVGHANSTAEVTFDTFVDAWLQDDPPDYAKVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCCCHHHHHC
RQSRFVSEGDGSLGVDHLFRHDQLHEAVAFLEDRVQATLDVGRSNVSPARDAVLSAEMEA
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
RLHAEAPEEFALWARLGG
HHCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA