Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054489
Identifier: 89054489
GI number: 89054489
Start: 1998481
End: 1998792
Strand: Reverse
Name: 89054489
Synonym: Jann_1998
Alternate gene names: NA
Gene position: 1998792-1998481 (Counterclockwise)
Preceding gene: 89054490
Following gene: 89054476
Centisome position: 46.29
GC content: 64.42
Gene sequence:
>312_bases ATGCTGCTCGGCATGACACTGCAACCGCACCCTTCGCCACCACCTAATTGCCCGGCCAAGCCGGTCAATGCCGCACGGAT CGAGGCAGCGCTCCTTAAGGTGGCAAAGCTGGTGGCGCAGGACCCGGCGTTCGCGCCGGTCTTCGAGCGGTTGGAAGCGG AGTTGGCCGCGACCGTGAAGGAGGAGAACCGGATGTCAGAAGCGCAGCGCCGGGCGCGGGCGCTCCTCGCTCAGAAAGCG ACCCGACCGACGAGTTCGGCGACATGTTCGAGCGACGCACCTTTTCCGTACCGTTCCCGATCTAATCGATGA
Upstream 100 bases:
>100_bases TGTGGAGCACTTGAGAGATAAACCGTCCGATTTCTACGCCGCTGCTGGCTGTACTGCGACCAACGCGCGTTGCACCTGCA CAGCGCTCCTCGTTGGCCCC
Downstream 100 bases:
>100_bases CCAAACAAATCCCGCCTTATCCGGTCGTCGATCCCGGCGGCGAGCATGCGATCCTCGAAGGAGTGCCGGAGCGAGTAAAA TGAGTGACGCGGGGTTTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MLLGMTLQPHPSPPPNCPAKPVNAARIEAALLKVAKLVAQDPAFAPVFERLEAELAATVKEENRMSEAQRRARALLAQKA TRPTSSATCSSDAPFPYRSRSNR
Sequences:
>Translated_103_residues MLLGMTLQPHPSPPPNCPAKPVNAARIEAALLKVAKLVAQDPAFAPVFERLEAELAATVKEENRMSEAQRRARALLAQKA TRPTSSATCSSDAPFPYRSRSNR >Mature_103_residues MLLGMTLQPHPSPPPNCPAKPVNAARIEAALLKVAKLVAQDPAFAPVFERLEAELAATVKEENRMSEAQRRARALLAQKA TRPTSSATCSSDAPFPYRSRSNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11181; Mature: 11181
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLGMTLQPHPSPPPNCPAKPVNAARIEAALLKVAKLVAQDPAFAPVFERLEAELAATVK CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH EENRMSEAQRRARALLAQKATRPTSSATCSSDAPFPYRSRSNR HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLLGMTLQPHPSPPPNCPAKPVNAARIEAALLKVAKLVAQDPAFAPVFERLEAELAATVK CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH EENRMSEAQRRARALLAQKATRPTSSATCSSDAPFPYRSRSNR HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA