Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054470
Identifier: 89054470
GI number: 89054470
Start: 1975060
End: 1975374
Strand: Reverse
Name: 89054470
Synonym: Jann_1979
Alternate gene names: NA
Gene position: 1975374-1975060 (Counterclockwise)
Preceding gene: 89054476
Following gene: 89054469
Centisome position: 45.75
GC content: 64.13
Gene sequence:
>315_bases ATGCCCGCCATCACCCACGTTTTCTGGCGCGATATCCCCGCGCAGGTGATTATCGGCAAGGGCCGGTCAGGCGCGAAAGC TCCGCTGCCCGAGCGGTTTGAGCAAGCGATTGACCGCGCCGCCATGAAGGTCGGCGCAAAAGATGACGACGCCTACCTGG CTGGCTTCCATCGCGTGATCGTAGGGGAGGCCGACGGCGACCTGAAAGAAGCCGCCGCAGCGGAGGCCGCCAAACTTGAC GCCGCATATGACACTACTCGCCTCAAGACCCTGATCGACGCGGAGGGGCATGACCCGTCCAAGCCTGCCACCTGA
Upstream 100 bases:
>100_bases ACCCTGCGTGATGTCGAAAACAGGCCCGGTATGCCGTCATAGGCCACATATTGTGTCGGAAACCCGGGCAGGAATCGCAC GCCCACATCGGAGAGAGCCC
Downstream 100 bases:
>100_bases ATGACATTCCGGGAGACCCTCATGGCCCTTCTCAACTTCCGCAAGCAGGCGCCCGCGCCCACCGCCACCAGCGCCGATAT GGAAGCCCTCCTGCAGGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MPAITHVFWRDIPAQVIIGKGRSGAKAPLPERFEQAIDRAAMKVGAKDDDAYLAGFHRVIVGEADGDLKEAAAAEAAKLD AAYDTTRLKTLIDAEGHDPSKPAT
Sequences:
>Translated_104_residues MPAITHVFWRDIPAQVIIGKGRSGAKAPLPERFEQAIDRAAMKVGAKDDDAYLAGFHRVIVGEADGDLKEAAAAEAAKLD AAYDTTRLKTLIDAEGHDPSKPAT >Mature_103_residues PAITHVFWRDIPAQVIIGKGRSGAKAPLPERFEQAIDRAAMKVGAKDDDAYLAGFHRVIVGEADGDLKEAAAAEAAKLDA AYDTTRLKTLIDAEGHDPSKPAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11084; Mature: 10952
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAITHVFWRDIPAQVIIGKGRSGAKAPLPERFEQAIDRAAMKVGAKDDDAYLAGFHRVI CCCCHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHEEE VGEADGDLKEAAAAEAAKLDAAYDTTRLKTLIDAEGHDPSKPAT EECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PAITHVFWRDIPAQVIIGKGRSGAKAPLPERFEQAIDRAAMKVGAKDDDAYLAGFHRVI CCCHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHEEE VGEADGDLKEAAAAEAAKLDAAYDTTRLKTLIDAEGHDPSKPAT EECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA