Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054452
Identifier: 89054452
GI number: 89054452
Start: 1955009
End: 1955734
Strand: Direct
Name: 89054452
Synonym: Jann_1961
Alternate gene names: NA
Gene position: 1955009-1955734 (Clockwise)
Preceding gene: 89054451
Following gene: 89054453
Centisome position: 45.28
GC content: 66.94
Gene sequence:
>726_bases ATGAGCGCCTGGGACAAAGAAAGTTTCTTCAAGATCCACGCCGATTTGCCCCGTGAGGGGCCCGGCGAAACGGCAGATGT GGCCTGGGCGGCGGAGGTCGCGGGGCTGCGTCCGGGCGCGCGGATCGTTGATGCGGGCTCCGGTCCCGGCGGCGATATCG GCGCGCTGTTGCGGGCGGCGGAGGGGGCCCATGTGACGGCCATTGATGCCCATGCCCCGTTCATCGACGCGGCGAAGACG CGCTGGGGCGCGGATAAGCGGGTTGATCTGGTCGCGGGCGATTATATCGGGATCACCGGCCCCTTCGATTTCATCTGGTC TGCGGGGGCGGTCTATTTTCACGGCATCGCGGACTTGCTGCCGCAGTGGCGGCCTGCCTTGGCCGATGGCGGTGCCATTG CCTTCTCGGAGCCGTGCGTGTTCACCGACGGCCCGCCATCGGATGTGGTGAAAGCGATCTGGGACGATTACCCGCGGCTG ACCGATGCGGATGGCATTGCCGCCCAGGTGCGGCTGGCGGGGTTTGAGGTGGTGGCGACCCGGACGCTCTCAGACGTGGC ATGGGAGAGCTATTACCGCCCGATGGAGGCGCGGATTGCGGAGCTGCGCGGATCGGCGGATGAGCGGATGCACAAGGCGC TGGATGAGGCGGAGGCCGAGATTGCGGCCTGGCGTGCGCATAGGACCGAGACGGGGTATCTGCTGTCGGTGGTGAGGCCA GCTTGA
Upstream 100 bases:
>100_bases CCCAGTTCGGGATGAATGCGGAGCGGGTGTTCTTCGACCATACGCTCGATATCGTCGCATCGGATCACTGGATTTTCACC CACCCCTGCGGAGGCCCACC
Downstream 100 bases:
>100_bases GCATTCAGGCCTGTGCAGATCTGGTCGCACGCGGGGATCCGCGCCGGTTTCGGGCGGCGATGGCAGCCCCCCTGGCGGCG CGGGAGGTCCTGTTGCCGCT
Product: type 12 methyltransferase
Products: NA
Alternate protein names: MerR Family Transcriptional Regulator; Transcriptional Regulator MerR Family; Methyltransferase; SAM-Dependent Methyltransferase; Transcriptional Regulator; Methyltransferase Domain Family; Transferase; Methyltransferase Domain Protein; SAM-Dependent Methyltransferases; Transcription Regulator; Regulatory Protein MerR; Signal Transduction Histidine Kinase; Acetyltransferase-Like Protein
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MSAWDKESFFKIHADLPREGPGETADVAWAAEVAGLRPGARIVDAGSGPGGDIGALLRAAEGAHVTAIDAHAPFIDAAKT RWGADKRVDLVAGDYIGITGPFDFIWSAGAVYFHGIADLLPQWRPALADGGAIAFSEPCVFTDGPPSDVVKAIWDDYPRL TDADGIAAQVRLAGFEVVATRTLSDVAWESYYRPMEARIAELRGSADERMHKALDEAEAEIAAWRAHRTETGYLLSVVRP A
Sequences:
>Translated_241_residues MSAWDKESFFKIHADLPREGPGETADVAWAAEVAGLRPGARIVDAGSGPGGDIGALLRAAEGAHVTAIDAHAPFIDAAKT RWGADKRVDLVAGDYIGITGPFDFIWSAGAVYFHGIADLLPQWRPALADGGAIAFSEPCVFTDGPPSDVVKAIWDDYPRL TDADGIAAQVRLAGFEVVATRTLSDVAWESYYRPMEARIAELRGSADERMHKALDEAEAEIAAWRAHRTETGYLLSVVRP A >Mature_240_residues SAWDKESFFKIHADLPREGPGETADVAWAAEVAGLRPGARIVDAGSGPGGDIGALLRAAEGAHVTAIDAHAPFIDAAKTR WGADKRVDLVAGDYIGITGPFDFIWSAGAVYFHGIADLLPQWRPALADGGAIAFSEPCVFTDGPPSDVVKAIWDDYPRLT DADGIAAQVRLAGFEVVATRTLSDVAWESYYRPMEARIAELRGSADERMHKALDEAEAEIAAWRAHRTETGYLLSVVRPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25829; Mature: 25698
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAWDKESFFKIHADLPREGPGETADVAWAAEVAGLRPGARIVDAGSGPGGDIGALLRAA CCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHC EGAHVTAIDAHAPFIDAAKTRWGADKRVDLVAGDYIGITGPFDFIWSAGAVYFHGIADLL CCCEEEEECCCCCCHHHHHHHCCCCCEEEEEECCEEECCCCHHHHHHCCHHHHHHHHHHH PQWRPALADGGAIAFSEPCVFTDGPPSDVVKAIWDDYPRLTDADGIAAQVRLAGFEVVAT HHHCHHHCCCCEEEECCCEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCEEEEHH RTLSDVAWESYYRPMEARIAELRGSADERMHKALDEAEAEIAAWRAHRTETGYLLSVVRP HHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC A C >Mature Secondary Structure SAWDKESFFKIHADLPREGPGETADVAWAAEVAGLRPGARIVDAGSGPGGDIGALLRAA CCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHC EGAHVTAIDAHAPFIDAAKTRWGADKRVDLVAGDYIGITGPFDFIWSAGAVYFHGIADLL CCCEEEEECCCCCCHHHHHHHCCCCCEEEEEECCEEECCCCHHHHHHCCHHHHHHHHHHH PQWRPALADGGAIAFSEPCVFTDGPPSDVVKAIWDDYPRLTDADGIAAQVRLAGFEVVAT HHHCHHHCCCCEEEECCCEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCEEEEHH RTLSDVAWESYYRPMEARIAELRGSADERMHKALDEAEAEIAAWRAHRTETGYLLSVVRP HHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA