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The map label for this gene is 89054453

Identifier: 89054453

GI number: 89054453

Start: 1955731

End: 1956477

Strand: Direct

Name: 89054453

Synonym: Jann_1962

Alternate gene names: NA

Gene position: 1955731-1956477 (Clockwise)

Preceding gene: 89054452

Following gene: 89054455

Centisome position: 45.29

GC content: 69.34

Gene sequence:

>747_bases
TTGAGCATTCAGGCCTGTGCAGATCTGGTCGCACGCGGGGATCCGCGCCGGTTTCGGGCGGCGATGGCAGCCCCCCTGGC
GGCGCGGGAGGTCCTGTTGCCGCTCTATGCGTTCAACATCGAAGTGAGCCGCGCCCCTTGGGTGACCGAGGAGCCGATGA
TCGCAGAGATGCGCCTGCAATGGTGGCGCGATGCGCTGGAAGAAATCGCGGAGGGTCGGGCGCGCCGCCATGAGGTGGTT
GATGCGCTGGGGTTTCTGGATGCCGAGGGCGTCGAGGCGCTGGACCAGCTGATCGCAGCACGGCGGTGGGACGTCTATAA
GGATGCGTTTGAGGATGAGGCGGCCTTTGCGCAATATATCCAGCGGACCTCAGGCCATCTGATCGACGCAGGGATCCGTG
CGTTGGGCGGGACGCCGACGGCGGCCACAGACGCCCTCGGCACCGCCGCCGGGCTGGCGCGGTATCTGGTGGCGGTGCCC
GCGCTTGAAGCGCGCGGGCGGGTGCCGCTCCTTGATGGCCGCGCTGCGGCCCTCTCCTCGCTGGCACAAGGCGCGCTGCG
CGCGTGGCCCAAGCGGGTGGATGTGGTGATGCCCGCACGGGCGGCGCTGTTTGAGGTGGCAGGGGCCAAGGCCATCTTGA
AACGCGTGGTCGCAGATCCGGGGGCCGTGGCGGAGGGGCGGCTGGACGTGCCGCAGGGGCGCGAAACGCTCAGCCTGATG
GCGGCCTCGTTCCTGGGGCGGATCTGA

Upstream 100 bases:

>100_bases
AGCGGATGCACAAGGCGCTGGATGAGGCGGAGGCCGAGATTGCGGCCTGGCGTGCGCATAGGACCGAGACGGGGTATCTG
CTGTCGGTGGTGAGGCCAGC

Downstream 100 bases:

>100_bases
GGCCTGACGCGACGCCCGCCCTTTATGCCGCTCAGGCGGCGCGGGCCACGATCCCGCTCAGGCGGCGCGCGCCTGGGGCC
GCATCGCCAGCCAGATCAGG

Product: hypothetical protein

Products: diphosphate; prephytoene diphosphate

Alternate protein names: None

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MSIQACADLVARGDPRRFRAAMAAPLAAREVLLPLYAFNIEVSRAPWVTEEPMIAEMRLQWWRDALEEIAEGRARRHEVV
DALGFLDAEGVEALDQLIAARRWDVYKDAFEDEAAFAQYIQRTSGHLIDAGIRALGGTPTAATDALGTAAGLARYLVAVP
ALEARGRVPLLDGRAAALSSLAQGALRAWPKRVDVVMPARAALFEVAGAKAILKRVVADPGAVAEGRLDVPQGRETLSLM
AASFLGRI

Sequences:

>Translated_248_residues
MSIQACADLVARGDPRRFRAAMAAPLAAREVLLPLYAFNIEVSRAPWVTEEPMIAEMRLQWWRDALEEIAEGRARRHEVV
DALGFLDAEGVEALDQLIAARRWDVYKDAFEDEAAFAQYIQRTSGHLIDAGIRALGGTPTAATDALGTAAGLARYLVAVP
ALEARGRVPLLDGRAAALSSLAQGALRAWPKRVDVVMPARAALFEVAGAKAILKRVVADPGAVAEGRLDVPQGRETLSLM
AASFLGRI
>Mature_247_residues
SIQACADLVARGDPRRFRAAMAAPLAAREVLLPLYAFNIEVSRAPWVTEEPMIAEMRLQWWRDALEEIAEGRARRHEVVD
ALGFLDAEGVEALDQLIAARRWDVYKDAFEDEAAFAQYIQRTSGHLIDAGIRALGGTPTAATDALGTAAGLARYLVAVPA
LEARGRVPLLDGRAAALSSLAQGALRAWPKRVDVVMPARAALFEVAGAKAILKRVVADPGAVAEGRLDVPQGRETLSLMA
ASFLGRI

Specific function: Unknown

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.5.1.32

Molecular weight: Translated: 26692; Mature: 26561

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIQACADLVARGDPRRFRAAMAAPLAAREVLLPLYAFNIEVSRAPWVTEEPMIAEMRLQ
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHH
WWRDALEEIAEGRARRHEVVDALGFLDAEGVEALDQLIAARRWDVYKDAFEDEAAFAQYI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRTSGHLIDAGIRALGGTPTAATDALGTAAGLARYLVAVPALEARGRVPLLDGRAAALSS
HHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
LAQGALRAWPKRVDVVMPARAALFEVAGAKAILKRVVADPGAVAEGRLDVPQGRETLSLM
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
AASFLGRI
HHHHHCCC
>Mature Secondary Structure 
SIQACADLVARGDPRRFRAAMAAPLAAREVLLPLYAFNIEVSRAPWVTEEPMIAEMRLQ
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHH
WWRDALEEIAEGRARRHEVVDALGFLDAEGVEALDQLIAARRWDVYKDAFEDEAAFAQYI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRTSGHLIDAGIRALGGTPTAATDALGTAAGLARYLVAVPALEARGRVPLLDGRAAALSS
HHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
LAQGALRAWPKRVDVVMPARAALFEVAGAKAILKRVVADPGAVAEGRLDVPQGRETLSLM
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
AASFLGRI
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: geranylgeranyl diphosphate

Specific reaction: 2 geranylgeranyl diphosphate = diphosphate + prephytoene diphosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA