Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054451
Identifier: 89054451
GI number: 89054451
Start: 1954548
End: 1955012
Strand: Direct
Name: 89054451
Synonym: Jann_1960
Alternate gene names: NA
Gene position: 1954548-1955012 (Clockwise)
Preceding gene: 89054450
Following gene: 89054452
Centisome position: 45.27
GC content: 62.15
Gene sequence:
>465_bases TTGGCATTCTTGACCCTACCTCTCAGCCCTGCGCAATTGCAGGCTGCGGAGCCGCTGATCCTGTGCAACCTCACGGTCTT TCCCGACGGCAGCCCACTCACCGAAGTTGTCTTGGCCGATGACCGGGTCTTTGTCGGCATCGGATATGACACCGGCGGGG GTGAGTTCGTGTCCCTGCGCGAACCGGGGCGGTTTGCGCAAACCTGGGCCCGCCTTGCGCCCGTGCTGGGGGACATGACG TCTGATTTTGACAATCCGCCGGACGGTCAGCGATACGATCTGGTTCATGTGACCTTCGCTGACCAGAGAGTCGCGCGGTG GATAGCAACGGCGGACGGCACGGCGGTCCAGGACGCGATGGCCCAGTTCGGGATGAATGCGGAGCGGGTGTTCTTCGACC ATACGCTCGATATCGTCGCATCGGATCACTGGATTTTCACCCACCCCTGCGGAGGCCCACCATGA
Upstream 100 bases:
>100_bases CCAACATCGTGGATGCGAGTTTCGAGGCGCTGCTGGACGCGGTGAACTGGAAACTGATCCACGAAGGCGCAGCGGTCCTA TGACCGGGATCGCGACGACA
Downstream 100 bases:
>100_bases GCGCCTGGGACAAAGAAAGTTTCTTCAAGATCCACGCCGATTTGCCCCGTGAGGGGCCCGGCGAAACGGCAGATGTGGCC TGGGCGGCGGAGGTCGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MAFLTLPLSPAQLQAAEPLILCNLTVFPDGSPLTEVVLADDRVFVGIGYDTGGGEFVSLREPGRFAQTWARLAPVLGDMT SDFDNPPDGQRYDLVHVTFADQRVARWIATADGTAVQDAMAQFGMNAERVFFDHTLDIVASDHWIFTHPCGGPP
Sequences:
>Translated_154_residues MAFLTLPLSPAQLQAAEPLILCNLTVFPDGSPLTEVVLADDRVFVGIGYDTGGGEFVSLREPGRFAQTWARLAPVLGDMT SDFDNPPDGQRYDLVHVTFADQRVARWIATADGTAVQDAMAQFGMNAERVFFDHTLDIVASDHWIFTHPCGGPP >Mature_153_residues AFLTLPLSPAQLQAAEPLILCNLTVFPDGSPLTEVVLADDRVFVGIGYDTGGGEFVSLREPGRFAQTWARLAPVLGDMTS DFDNPPDGQRYDLVHVTFADQRVARWIATADGTAVQDAMAQFGMNAERVFFDHTLDIVASDHWIFTHPCGGPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16764; Mature: 16633
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFLTLPLSPAQLQAAEPLILCNLTVFPDGSPLTEVVLADDRVFVGIGYDTGGGEFVSLR CEEEEECCCCHHHCCCCCEEEEEEEECCCCCCCEEEEEECCEEEEEEEEECCCCCEEEEC EPGRFAQTWARLAPVLGDMTSDFDNPPDGQRYDLVHVTFADQRVARWIATADGTAVQDAM CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCHHHHHHHHCCCCCHHHHHH AQFGMNAERVFFDHTLDIVASDHWIFTHPCGGPP HHHCCCCCEEEEEEEEEEEECCCEEEECCCCCCC >Mature Secondary Structure AFLTLPLSPAQLQAAEPLILCNLTVFPDGSPLTEVVLADDRVFVGIGYDTGGGEFVSLR EEEEECCCCHHHCCCCCEEEEEEEECCCCCCCEEEEEECCEEEEEEEEECCCCCEEEEC EPGRFAQTWARLAPVLGDMTSDFDNPPDGQRYDLVHVTFADQRVARWIATADGTAVQDAM CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCHHHHHHHHCCCCCHHHHHH AQFGMNAERVFFDHTLDIVASDHWIFTHPCGGPP HHHCCCCCEEEEEEEEEEEECCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA