Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054448
Identifier: 89054448
GI number: 89054448
Start: 1950757
End: 1951083
Strand: Reverse
Name: 89054448
Synonym: Jann_1957
Alternate gene names: NA
Gene position: 1951083-1950757 (Counterclockwise)
Preceding gene: 89054454
Following gene: 89054447
Centisome position: 45.19
GC content: 61.77
Gene sequence:
>327_bases ATGCAGAGGGGCTTCGTAGACATTTATTGCCGGGGCCTGTTGGGCACAGCGCGCACCACGCCGTTCGGGGACGATGTGGT GATCTGGACGGTCCATGGCCACATGTTCGCCGCCTACGCGCAGGACGGTGAAGGGCTGTCGCTGCGCATTGCCGACAAGA TCACCGCGCATCAACTGGTCGGGCAGAAGCGGGCCGTGACCTCTCCCTATCTCAAAGGCACGGGGTGGGTCCTGTTTCCG TGGGAGACAGCGCCGACGGAATTGCGGGACTGGATCTTCAAGAGCTACCGGCTGGTTTTGAACGATGGCAATACGGGCGT GAGCTGA
Upstream 100 bases:
>100_bases CGTGTGCGTCATGGGGGTGGCGTAGCATACATTTGCATGCGCTAACAAGCCGCAGGCGATTGCACCTGCAATTTTTGCGG ATGGCGGCTACCGTGCGCCC
Downstream 100 bases:
>100_bases TCGCCGAGCAAATGGGGTTGCGTCCGGTGTCCGACCCCCGCAACGTCGCGCCAGATATGTCTGTTTCGGAGCCTGCCCCA TGCCAGCCTTTTCCAAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MQRGFVDIYCRGLLGTARTTPFGDDVVIWTVHGHMFAAYAQDGEGLSLRIADKITAHQLVGQKRAVTSPYLKGTGWVLFP WETAPTELRDWIFKSYRLVLNDGNTGVS
Sequences:
>Translated_108_residues MQRGFVDIYCRGLLGTARTTPFGDDVVIWTVHGHMFAAYAQDGEGLSLRIADKITAHQLVGQKRAVTSPYLKGTGWVLFP WETAPTELRDWIFKSYRLVLNDGNTGVS >Mature_108_residues MQRGFVDIYCRGLLGTARTTPFGDDVVIWTVHGHMFAAYAQDGEGLSLRIADKITAHQLVGQKRAVTSPYLKGTGWVLFP WETAPTELRDWIFKSYRLVLNDGNTGVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12059; Mature: 12059
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRGFVDIYCRGLLGTARTTPFGDDVVIWTVHGHMFAAYAQDGEGLSLRIADKITAHQLV CCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCEEEEEECCHHHHHHH GQKRAVTSPYLKGTGWVLFPWETAPTELRDWIFKSYRLVLNDGNTGVS CCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCEEEEEECCCCCCC >Mature Secondary Structure MQRGFVDIYCRGLLGTARTTPFGDDVVIWTVHGHMFAAYAQDGEGLSLRIADKITAHQLV CCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCEEEEEECCHHHHHHH GQKRAVTSPYLKGTGWVLFPWETAPTELRDWIFKSYRLVLNDGNTGVS CCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA