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The map label for this gene is yddS [H]

Identifier: 89054454

GI number: 89054454

Start: 1956535

End: 1957764

Strand: Reverse

Name: yddS [H]

Synonym: Jann_1963

Alternate gene names: 89054454

Gene position: 1957764-1956535 (Counterclockwise)

Preceding gene: 89054463

Following gene: 89054448

Centisome position: 45.34

GC content: 64.47

Gene sequence:

>1230_bases
ATGACTGACAGCACCCCCATTGCCGTCGATTCCGACGCCGCCGCAAAACGCAACGTCATCGTTCTTGTCTTGGCGCAAGC
GCTTCTGGGGGCGCAGATGCCGATGCTGTTTGTGATCGGCGGACTTGCGGGCCTGATGATCGCCCCGACGCCTGCGCTCG
CCACGATCCCGATCTCGATGATTGTCTTCGGGTCGATGACCACCGCGCCGTGGATCTCTCCGCTGATGCAGAAATACGGA
CGCCAGGCGGGCTTCTACGTGGGCGCTTTGGGCGGCGCTTTGGGCGCGGCCATTTCGGCCTATGGCCTGTGGGTCGACAG
CTTCCCGATCTTCCTTATCGGCTCCTATTTCAGCGGCATCTACATGTCTGCGCAGGGCTTTTACCGCTTCGCCGCGACGG
ATACCGCCTCGCCCGAGTTCAAGCCCAAGGCCATCTCCTACGTCATGGCGGGTGGGCTTTTATCCGCCCTGATCGGCCCG
CAATTGGTGAAAGCCTCCAGCGAGGCGACGGTGATCCCGTTTCTGGGCACCTACGCCTTTATCATCGCGATCAATGTCGT
CGGCTCGGTCCTGTTCGCCTTCCTGCACCTGCCCAAGCCGGAGCCCACCCGCGCCGACAGCCCCCGGGGCCGCAGCCGGG
CCGAGATGCTGCGCGACCCCAAGATCGTCGTGGCGATGATCTGCGGCGCGGTGAGCTATTCGCTGATGAACCTGATGATG
ACGTCGACGCCCTTGGCCGTGGTGGGGTGTGGCTTCACGACGGGCAACGCCGCCGATGTCGTCTCGGCCCATGTGATCGC
CATGTTTGCCCCGTCCTTCTTTACCGGGCACCTGATTGCGCGCTTCGGTGCGTCCAAGATTGTCGCCACGGGATTGGTGC
TTCTGGCCGCAGCCGGGATCGTGGCAATGACAGGGGTGGAGCTGTTCCAATTCTTCGGCGCGCTGATCCTACTGGGCCTT
GGCTGGAACTTCGGGTTCATCGGCGCAACGGCGATGCTGACGGCCTCCCACGCTCCAGAAGAGCGGGGAACGGCCCAAGG
CATGAACGACTTCGTGGTGTTCGGGTCGGTGACCATCGCGTCGCTCAGCTCGGGCGTCTTGATGCATTCGGGCGGCGAGG
ACGTCGTGCAGGGCTGGACCTCCGTGAACCTCGCCATGGCCCCGTTCCTGGTCTTGGCCGGGGCGGCCCTGATCTGGCTG
GCGATGCGGCCCCAGGCGCGCGCCGCCTGA

Upstream 100 bases:

>100_bases
TTCCAGGTCTCGGTCCAGGGCCACATCCGCCGTGCGCCGCCACAAAACGTGACACCCACCCATCTGGACCCTCCGCCCCA
AACCCTATACCGCTCGGACC

Downstream 100 bases:

>100_bases
GCGGGATCGTGGCCCGCGCCGCCTGAGCGGCATAAAGGGCGGGCGTCGCGTCAGGCCTCAGATCCGCCCCAGGAACGAGG
CCGCCATCAGGCTGAGCGTT

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MTDSTPIAVDSDAAAKRNVIVLVLAQALLGAQMPMLFVIGGLAGLMIAPTPALATIPISMIVFGSMTTAPWISPLMQKYG
RQAGFYVGALGGALGAAISAYGLWVDSFPIFLIGSYFSGIYMSAQGFYRFAATDTASPEFKPKAISYVMAGGLLSALIGP
QLVKASSEATVIPFLGTYAFIIAINVVGSVLFAFLHLPKPEPTRADSPRGRSRAEMLRDPKIVVAMICGAVSYSLMNLMM
TSTPLAVVGCGFTTGNAADVVSAHVIAMFAPSFFTGHLIARFGASKIVATGLVLLAAAGIVAMTGVELFQFFGALILLGL
GWNFGFIGATAMLTASHAPEERGTAQGMNDFVVFGSVTIASLSSGVLMHSGGEDVVQGWTSVNLAMAPFLVLAGAALIWL
AMRPQARAA

Sequences:

>Translated_409_residues
MTDSTPIAVDSDAAAKRNVIVLVLAQALLGAQMPMLFVIGGLAGLMIAPTPALATIPISMIVFGSMTTAPWISPLMQKYG
RQAGFYVGALGGALGAAISAYGLWVDSFPIFLIGSYFSGIYMSAQGFYRFAATDTASPEFKPKAISYVMAGGLLSALIGP
QLVKASSEATVIPFLGTYAFIIAINVVGSVLFAFLHLPKPEPTRADSPRGRSRAEMLRDPKIVVAMICGAVSYSLMNLMM
TSTPLAVVGCGFTTGNAADVVSAHVIAMFAPSFFTGHLIARFGASKIVATGLVLLAAAGIVAMTGVELFQFFGALILLGL
GWNFGFIGATAMLTASHAPEERGTAQGMNDFVVFGSVTIASLSSGVLMHSGGEDVVQGWTSVNLAMAPFLVLAGAALIWL
AMRPQARAA
>Mature_408_residues
TDSTPIAVDSDAAAKRNVIVLVLAQALLGAQMPMLFVIGGLAGLMIAPTPALATIPISMIVFGSMTTAPWISPLMQKYGR
QAGFYVGALGGALGAAISAYGLWVDSFPIFLIGSYFSGIYMSAQGFYRFAATDTASPEFKPKAISYVMAGGLLSALIGPQ
LVKASSEATVIPFLGTYAFIIAINVVGSVLFAFLHLPKPEPTRADSPRGRSRAEMLRDPKIVVAMICGAVSYSLMNLMMT
STPLAVVGCGFTTGNAADVVSAHVIAMFAPSFFTGHLIARFGASKIVATGLVLLAAAGIVAMTGVELFQFFGALILLGLG
WNFGFIGATAMLTASHAPEERGTAQGMNDFVVFGSVTIASLSSGVLMHSGGEDVVQGWTSVNLAMAPFLVLAGAALIWLA
MRPQARAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005828 [H]

Pfam domain/function: PF07690 MFS_1; PF00083 Sugar_tr [H]

EC number: NA

Molecular weight: Translated: 42440; Mature: 42308

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSTPIAVDSDAAAKRNVIVLVLAQALLGAQMPMLFVIGGLAGLMIAPTPALATIPISM
CCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
IVFGSMTTAPWISPLMQKYGRQAGFYVGALGGALGAAISAYGLWVDSFPIFLIGSYFSGI
HHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
YMSAQGFYRFAATDTASPEFKPKAISYVMAGGLLSALIGPQLVKASSEATVIPFLGTYAF
EEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCCCCCEEEHHHHHHHH
IIAINVVGSVLFAFLHLPKPEPTRADSPRGRSRAEMLRDPKIVVAMICGAVSYSLMNLMM
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHH
TSTPLAVVGCGFTTGNAADVVSAHVIAMFAPSFFTGHLIARFGASKIVATGLVLLAAAGI
HCCCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
VAMTGVELFQFFGALILLGLGWNFGFIGATAMLTASHAPEERGTAQGMNDFVVFGSVTIA
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHH
SLSSGVLMHSGGEDVVQGWTSVNLAMAPFLVLAGAALIWLAMRPQARAA
HHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure 
TDSTPIAVDSDAAAKRNVIVLVLAQALLGAQMPMLFVIGGLAGLMIAPTPALATIPISM
CCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
IVFGSMTTAPWISPLMQKYGRQAGFYVGALGGALGAAISAYGLWVDSFPIFLIGSYFSGI
HHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
YMSAQGFYRFAATDTASPEFKPKAISYVMAGGLLSALIGPQLVKASSEATVIPFLGTYAF
EEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCCCCCEEEHHHHHHHH
IIAINVVGSVLFAFLHLPKPEPTRADSPRGRSRAEMLRDPKIVVAMICGAVSYSLMNLMM
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHH
TSTPLAVVGCGFTTGNAADVVSAHVIAMFAPSFFTGHLIARFGASKIVATGLVLLAAAGI
HCCCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
VAMTGVELFQFFGALILLGLGWNFGFIGATAMLTASHAPEERGTAQGMNDFVVFGSVTIA
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHH
SLSSGVLMHSGGEDVVQGWTSVNLAMAPFLVLAGAALIWLAMRPQARAA
HHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]