Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054429

Identifier: 89054429

GI number: 89054429

Start: 1928740

End: 1929459

Strand: Direct

Name: 89054429

Synonym: Jann_1938

Alternate gene names: NA

Gene position: 1928740-1929459 (Clockwise)

Preceding gene: 89054428

Following gene: 89054432

Centisome position: 44.67

GC content: 71.94

Gene sequence:

>720_bases
ATGGTGCGCCCCACGGCCTCCAACGTCCCCTCCGCCCATGCCGAGCCGCATCTGTCCGGCCGGGCGGGCTGGCTGCGGGC
GGCGGTCATGGGGGCCAATGACGGGATCTTGTCGACTGCGTCACTGATTGCCGGGGTCGCGGCGGGGTCTGGCGACAAGG
CCACGATCCTGCTGGCGGGCCTTGCGGGGCTGGTGGCGGGCGCGCTGAGCATGGCGGCGGGAGAATATGTCTCCGTCTCC
AGTCAGGCCGATGCGGAACGCGCCGATGTGGAGCGGGAACGCTCAGAGCTGGCCCGGAACCCGGAGGCTGAGCTGGCGGA
ACTGACCGCGATCTATGTGGAGCGGGGCCTGACCCCGGATCTGGCGGACCGTGTGGCGCGGGACCTGACGGAGGTCGACG
CGCTGACTGCGCATTTGCGCGATGAGATCGGCTTGACCGACCTGGCCCCGCCTCGACCGGTGCAGGCGGCGCTGGTCTCG
GCGCTGACCTTTGCGGCGGGGGCCTCGGTGCCCCTGGCGATGGCGTGGCTTGCGCCGGTGGACGACATTTTGATCTGGGT
CGGGGGCGCAACATTGGCGGCCCTTGGATCGCTGGGGGCGTTGGGGGCCACGGTGGGTGGCGCGCCCCGGGTGCGGGCCG
CGGCGCGCGTGATGGTCTGGGGCGCGCTGGCCATGGCGATCACCACCGCGATCGGCGCGCTCGTGGGACAGGCCATCTGA

Upstream 100 bases:

>100_bases
CATTGACCCGCACAACATCTTCAATCCAGGAAAGATGAACCTGCCGCCCCTTGGGGACACGGACCTGTCGTCCCCCCAGG
GCAAGGCCGCGCGCTGACCC

Downstream 100 bases:

>100_bases
TCCTGCGGCAGGCCGTGCGCCGGGTGTTTCGGGTCACGTCTTCGCTGTGGATAGGGGCACGCCCGCGCGCATCCCCGATA
CCGCGCGCGGGATGGTCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: Nodulin; Nodulin-Related Protein; Iron And Manganese Transporter; Nodulin-Like Protein-Like Protein; Transmembrane Protein; Ypothetical Protein SMU.; Nodulin-Related Transmembrane Protein; Nodulin- Domain-Containing Protein; Nodulin-Related Integral Membrane Protein DUF; Mebrane Associated Protein DUF; Nodulin-

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MVRPTASNVPSAHAEPHLSGRAGWLRAAVMGANDGILSTASLIAGVAAGSGDKATILLAGLAGLVAGALSMAAGEYVSVS
SQADAERADVERERSELARNPEAELAELTAIYVERGLTPDLADRVARDLTEVDALTAHLRDEIGLTDLAPPRPVQAALVS
ALTFAAGASVPLAMAWLAPVDDILIWVGGATLAALGSLGALGATVGGAPRVRAAARVMVWGALAMAITTAIGALVGQAI

Sequences:

>Translated_239_residues
MVRPTASNVPSAHAEPHLSGRAGWLRAAVMGANDGILSTASLIAGVAAGSGDKATILLAGLAGLVAGALSMAAGEYVSVS
SQADAERADVERERSELARNPEAELAELTAIYVERGLTPDLADRVARDLTEVDALTAHLRDEIGLTDLAPPRPVQAALVS
ALTFAAGASVPLAMAWLAPVDDILIWVGGATLAALGSLGALGATVGGAPRVRAAARVMVWGALAMAITTAIGALVGQAI
>Mature_239_residues
MVRPTASNVPSAHAEPHLSGRAGWLRAAVMGANDGILSTASLIAGVAAGSGDKATILLAGLAGLVAGALSMAAGEYVSVS
SQADAERADVERERSELARNPEAELAELTAIYVERGLTPDLADRVARDLTEVDALTAHLRDEIGLTDLAPPRPVQAALVS
ALTFAAGASVPLAMAWLAPVDDILIWVGGATLAALGSLGALGATVGGAPRVRAAARVMVWGALAMAITTAIGALVGQAI

Specific function: Unknown

COG id: COG1814

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23981; Mature: 23981

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRPTASNVPSAHAEPHLSGRAGWLRAAVMGANDGILSTASLIAGVAAGSGDKATILLAG
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH
LAGLVAGALSMAAGEYVSVSSQADAERADVERERSELARNPEAELAELTAIYVERGLTPD
HHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHH
LADRVARDLTEVDALTAHLRDEIGLTDLAPPRPVQAALVSALTFAAGASVPLAMAWLAPV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
DDILIWVGGATLAALGSLGALGATVGGAPRVRAAARVMVWGALAMAITTAIGALVGQAI
HHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVRPTASNVPSAHAEPHLSGRAGWLRAAVMGANDGILSTASLIAGVAAGSGDKATILLAG
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH
LAGLVAGALSMAAGEYVSVSSQADAERADVERERSELARNPEAELAELTAIYVERGLTPD
HHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHH
LADRVARDLTEVDALTAHLRDEIGLTDLAPPRPVQAALVSALTFAAGASVPLAMAWLAPV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
DDILIWVGGATLAALGSLGALGATVGGAPRVRAAARVMVWGALAMAITTAIGALVGQAI
HHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA