Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054429
Identifier: 89054429
GI number: 89054429
Start: 1928740
End: 1929459
Strand: Direct
Name: 89054429
Synonym: Jann_1938
Alternate gene names: NA
Gene position: 1928740-1929459 (Clockwise)
Preceding gene: 89054428
Following gene: 89054432
Centisome position: 44.67
GC content: 71.94
Gene sequence:
>720_bases ATGGTGCGCCCCACGGCCTCCAACGTCCCCTCCGCCCATGCCGAGCCGCATCTGTCCGGCCGGGCGGGCTGGCTGCGGGC GGCGGTCATGGGGGCCAATGACGGGATCTTGTCGACTGCGTCACTGATTGCCGGGGTCGCGGCGGGGTCTGGCGACAAGG CCACGATCCTGCTGGCGGGCCTTGCGGGGCTGGTGGCGGGCGCGCTGAGCATGGCGGCGGGAGAATATGTCTCCGTCTCC AGTCAGGCCGATGCGGAACGCGCCGATGTGGAGCGGGAACGCTCAGAGCTGGCCCGGAACCCGGAGGCTGAGCTGGCGGA ACTGACCGCGATCTATGTGGAGCGGGGCCTGACCCCGGATCTGGCGGACCGTGTGGCGCGGGACCTGACGGAGGTCGACG CGCTGACTGCGCATTTGCGCGATGAGATCGGCTTGACCGACCTGGCCCCGCCTCGACCGGTGCAGGCGGCGCTGGTCTCG GCGCTGACCTTTGCGGCGGGGGCCTCGGTGCCCCTGGCGATGGCGTGGCTTGCGCCGGTGGACGACATTTTGATCTGGGT CGGGGGCGCAACATTGGCGGCCCTTGGATCGCTGGGGGCGTTGGGGGCCACGGTGGGTGGCGCGCCCCGGGTGCGGGCCG CGGCGCGCGTGATGGTCTGGGGCGCGCTGGCCATGGCGATCACCACCGCGATCGGCGCGCTCGTGGGACAGGCCATCTGA
Upstream 100 bases:
>100_bases CATTGACCCGCACAACATCTTCAATCCAGGAAAGATGAACCTGCCGCCCCTTGGGGACACGGACCTGTCGTCCCCCCAGG GCAAGGCCGCGCGCTGACCC
Downstream 100 bases:
>100_bases TCCTGCGGCAGGCCGTGCGCCGGGTGTTTCGGGTCACGTCTTCGCTGTGGATAGGGGCACGCCCGCGCGCATCCCCGATA CCGCGCGCGGGATGGTCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Nodulin; Nodulin-Related Protein; Iron And Manganese Transporter; Nodulin-Like Protein-Like Protein; Transmembrane Protein; Ypothetical Protein SMU.; Nodulin-Related Transmembrane Protein; Nodulin- Domain-Containing Protein; Nodulin-Related Integral Membrane Protein DUF; Mebrane Associated Protein DUF; Nodulin-
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MVRPTASNVPSAHAEPHLSGRAGWLRAAVMGANDGILSTASLIAGVAAGSGDKATILLAGLAGLVAGALSMAAGEYVSVS SQADAERADVERERSELARNPEAELAELTAIYVERGLTPDLADRVARDLTEVDALTAHLRDEIGLTDLAPPRPVQAALVS ALTFAAGASVPLAMAWLAPVDDILIWVGGATLAALGSLGALGATVGGAPRVRAAARVMVWGALAMAITTAIGALVGQAI
Sequences:
>Translated_239_residues MVRPTASNVPSAHAEPHLSGRAGWLRAAVMGANDGILSTASLIAGVAAGSGDKATILLAGLAGLVAGALSMAAGEYVSVS SQADAERADVERERSELARNPEAELAELTAIYVERGLTPDLADRVARDLTEVDALTAHLRDEIGLTDLAPPRPVQAALVS ALTFAAGASVPLAMAWLAPVDDILIWVGGATLAALGSLGALGATVGGAPRVRAAARVMVWGALAMAITTAIGALVGQAI >Mature_239_residues MVRPTASNVPSAHAEPHLSGRAGWLRAAVMGANDGILSTASLIAGVAAGSGDKATILLAGLAGLVAGALSMAAGEYVSVS SQADAERADVERERSELARNPEAELAELTAIYVERGLTPDLADRVARDLTEVDALTAHLRDEIGLTDLAPPRPVQAALVS ALTFAAGASVPLAMAWLAPVDDILIWVGGATLAALGSLGALGATVGGAPRVRAAARVMVWGALAMAITTAIGALVGQAI
Specific function: Unknown
COG id: COG1814
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23981; Mature: 23981
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRPTASNVPSAHAEPHLSGRAGWLRAAVMGANDGILSTASLIAGVAAGSGDKATILLAG CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH LAGLVAGALSMAAGEYVSVSSQADAERADVERERSELARNPEAELAELTAIYVERGLTPD HHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHH LADRVARDLTEVDALTAHLRDEIGLTDLAPPRPVQAALVSALTFAAGASVPLAMAWLAPV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH DDILIWVGGATLAALGSLGALGATVGGAPRVRAAARVMVWGALAMAITTAIGALVGQAI HHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVRPTASNVPSAHAEPHLSGRAGWLRAAVMGANDGILSTASLIAGVAAGSGDKATILLAG CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH LAGLVAGALSMAAGEYVSVSSQADAERADVERERSELARNPEAELAELTAIYVERGLTPD HHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHH LADRVARDLTEVDALTAHLRDEIGLTDLAPPRPVQAALVSALTFAAGASVPLAMAWLAPV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH DDILIWVGGATLAALGSLGALGATVGGAPRVRAAARVMVWGALAMAITTAIGALVGQAI HHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA