Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is ssuD [H]
Identifier: 89054432
GI number: 89054432
Start: 1931545
End: 1932699
Strand: Direct
Name: ssuD [H]
Synonym: Jann_1941
Alternate gene names: 89054432
Gene position: 1931545-1932699 (Clockwise)
Preceding gene: 89054429
Following gene: 89054433
Centisome position: 44.73
GC content: 60.43
Gene sequence:
>1155_bases ATGACAGTGGTTCCGGTCACATCGGCAGATCTGGACGCCGCAGAGGTCAGCTGGTTCGCGGCGCTCTGCTCGGACGATTA TGAATTTCTCGGCGTGCCCGACGGGCGGTTGCGGTCGTCGTGGGACCATTGCAGCGGGCTGGTCCGCGAGGCCGAGGCGC AGGGTTTCCGCAATATCCTGTGCCCGTCGTCCTATCAGGTCGGTCAGGACACCCTGTCATTTGTCGCGGGTTGCGCGCCA ATCACCAGCAAAATCAACCTGTTGGCCGCCGTGCGCTGCGGCGAGATGCAACCCATCATGCTGGCCCGCACCATCGCGAC GCTCGACCACATGCTGGAAGGTCGTTTAACGGTAAACATTATTTCCAGCGACTTCCCTGGGGAGAAGGCGGACAGCGGAT ACCGCTACCAACGCTCCCGCGAAGTGGTGGAGATCCTGAAGCAGGCCTGGACCGACGATGAGATCAACTATCACGGTGAA GTCTATGATTTTAAAGGATTAACCACCGATCCCGTGCGACCCTACCAGACCGGCGGGCCGCTTTTGTATTTCGGCGGCTA TTCCCCCGCTGCGCTGGAGCTGTGCGGGCAGCATTGCGACGTCTACCTGATGTGGCCCGAGCCGAAGGAGGCGCTGGCGC AGCGCATGAAGGACGTGAACCAAGTCGCTGAAAAATATGGAAGAACGCTGGATTATGGTCTGCGCGTCCACATGATTGTC CGCGACACGGAAGCCGAGGCTCGCGACTACGCGGAGCATCTGACCTCCAAGCTGGACGATGAATACGGCAAGTTGATCCG CGAGCGCGCCTTGGATAGCACGTCCCTTGGTGTCGCACATCAGGCTAAGGCCCGGGAATTGGCTGATAAGTTCGGCTATG TGGAGCCGCATCTGTGGACCGGCATTGGCCGGGCGCGGTCCGGGTGCGGGGCGGCTTTGGTGGGGTCCGCCGATCAGGTC CTGACCCAGATTGAGGAGTATAAGAAGATGGGCATCCGCGCCTTCATCTTCTCGGGCTATCCGCATATGGATGAATGCAA ACATTTCGGACGGCTGGTCATGCCAGAGCTGAAAACCTGTTCAATGCCAGAGGTTTACGGGCGCGTGCCCGCCTCGGCCC CAGCAACGCCCCTGGGCGTGGGAGAGAGACGATGA
Upstream 100 bases:
>100_bases TTTGCCGAAATTGATATACCATTGATATACCCTGCCCGGATTGCTACGCCTTGGCCCAGAGGTGGTCAAGGGCGGCTGCA CGGCCAGAGGGAGAGAGCGC
Downstream 100 bases:
>100_bases CCAAGACCGCCATAGCAAACCGCATCAATGTGGGCGGGGTCGATATGTCCCGCATCGTGTATGGCATGTGGCGTCTGGGC GATGACAACGATACGTCGCC
Product: alkanesulfonate monooxygenase
Products: NA
Alternate protein names: FMNH2-dependent aliphatic sulfonate monooxygenase [H]
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MTVVPVTSADLDAAEVSWFAALCSDDYEFLGVPDGRLRSSWDHCSGLVREAEAQGFRNILCPSSYQVGQDTLSFVAGCAP ITSKINLLAAVRCGEMQPIMLARTIATLDHMLEGRLTVNIISSDFPGEKADSGYRYQRSREVVEILKQAWTDDEINYHGE VYDFKGLTTDPVRPYQTGGPLLYFGGYSPAALELCGQHCDVYLMWPEPKEALAQRMKDVNQVAEKYGRTLDYGLRVHMIV RDTEAEARDYAEHLTSKLDDEYGKLIRERALDSTSLGVAHQAKARELADKFGYVEPHLWTGIGRARSGCGAALVGSADQV LTQIEEYKKMGIRAFIFSGYPHMDECKHFGRLVMPELKTCSMPEVYGRVPASAPATPLGVGERR
Sequences:
>Translated_384_residues MTVVPVTSADLDAAEVSWFAALCSDDYEFLGVPDGRLRSSWDHCSGLVREAEAQGFRNILCPSSYQVGQDTLSFVAGCAP ITSKINLLAAVRCGEMQPIMLARTIATLDHMLEGRLTVNIISSDFPGEKADSGYRYQRSREVVEILKQAWTDDEINYHGE VYDFKGLTTDPVRPYQTGGPLLYFGGYSPAALELCGQHCDVYLMWPEPKEALAQRMKDVNQVAEKYGRTLDYGLRVHMIV RDTEAEARDYAEHLTSKLDDEYGKLIRERALDSTSLGVAHQAKARELADKFGYVEPHLWTGIGRARSGCGAALVGSADQV LTQIEEYKKMGIRAFIFSGYPHMDECKHFGRLVMPELKTCSMPEVYGRVPASAPATPLGVGERR >Mature_383_residues TVVPVTSADLDAAEVSWFAALCSDDYEFLGVPDGRLRSSWDHCSGLVREAEAQGFRNILCPSSYQVGQDTLSFVAGCAPI TSKINLLAAVRCGEMQPIMLARTIATLDHMLEGRLTVNIISSDFPGEKADSGYRYQRSREVVEILKQAWTDDEINYHGEV YDFKGLTTDPVRPYQTGGPLLYFGGYSPAALELCGQHCDVYLMWPEPKEALAQRMKDVNQVAEKYGRTLDYGLRVHMIVR DTEAEARDYAEHLTSKLDDEYGKLIRERALDSTSLGVAHQAKARELADKFGYVEPHLWTGIGRARSGCGAALVGSADQVL TQIEEYKKMGIRAFIFSGYPHMDECKHFGRLVMPELKTCSMPEVYGRVPASAPATPLGVGERR
Specific function: Catalyzes the desulfonation of aliphatic sulfonates [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SsuD family [H]
Homologues:
Organism=Escherichia coli, GI1787166, Length=376, Percent_Identity=31.1170212765957, Blast_Score=189, Evalue=3e-49, Organism=Escherichia coli, GI1787247, Length=287, Percent_Identity=24.7386759581882, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019911 - InterPro: IPR011251 - InterPro: IPR016048 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: =1.14.14.5 [H]
Molecular weight: Translated: 42609; Mature: 42478
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVVPVTSADLDAAEVSWFAALCSDDYEFLGVPDGRLRSSWDHCSGLVREAEAQGFRNIL CEEECCCCCCCCHHHHHHHHHHHCCCCEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHCC CPSSYQVGQDTLSFVAGCAPITSKINLLAAVRCGEMQPIMLARTIATLDHMLEGRLTVNI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEE ISSDFPGEKADSGYRYQRSREVVEILKQAWTDDEINYHGEVYDFKGLTTDPVRPYQTGGP ECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC LLYFGGYSPAALELCGQHCDVYLMWPEPKEALAQRMKDVNQVAEKYGRTLDYGLRVHMIV EEEECCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCEECCCEEEEEE RDTEAEARDYAEHLTSKLDDEYGKLIRERALDSTSLGVAHQAKARELADKFGYVEPHLWT ECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHH GIGRARSGCGAALVGSADQVLTQIEEYKKMGIRAFIFSGYPHMDECKHFGRLVMPELKTC HHHHHCCCCCCHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHCCHHHCCCCCCC SMPEVYGRVPASAPATPLGVGERR CCCHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TVVPVTSADLDAAEVSWFAALCSDDYEFLGVPDGRLRSSWDHCSGLVREAEAQGFRNIL EEECCCCCCCCHHHHHHHHHHHCCCCEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHCC CPSSYQVGQDTLSFVAGCAPITSKINLLAAVRCGEMQPIMLARTIATLDHMLEGRLTVNI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEE ISSDFPGEKADSGYRYQRSREVVEILKQAWTDDEINYHGEVYDFKGLTTDPVRPYQTGGP ECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC LLYFGGYSPAALELCGQHCDVYLMWPEPKEALAQRMKDVNQVAEKYGRTLDYGLRVHMIV EEEECCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCEECCCEEEEEE RDTEAEARDYAEHLTSKLDDEYGKLIRERALDSTSLGVAHQAKARELADKFGYVEPHLWT ECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHH GIGRARSGCGAALVGSADQVLTQIEEYKKMGIRAFIFSGYPHMDECKHFGRLVMPELKTC HHHHHCCCCCCHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHCCHHHCCCCCCC SMPEVYGRVPASAPATPLGVGERR CCCHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA