Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054427
Identifier: 89054427
GI number: 89054427
Start: 1926667
End: 1927044
Strand: Direct
Name: 89054427
Synonym: Jann_1936
Alternate gene names: NA
Gene position: 1926667-1927044 (Clockwise)
Preceding gene: 89054426
Following gene: 89054428
Centisome position: 44.62
GC content: 64.02
Gene sequence:
>378_bases ATGAAAACTGCCAAGGATTATATGGACGCTGCCAATGCCTCCGTGCCGAAGCTGTCCGCCGAGGAGGCGATCGCCAAACA TGGCGCGGGGCAGGGCACGTTCATCGACGTGCGCGACAGTGGTGATATCGCCGCCTCCGGCACGATTGCGGGTGCGCACC GTGTGCCACGCGGCATGATCGAATTCCGCGCCGATCCGGCCGTGGAGGCGCTCTATGATCCGGTGTTCCAAAAGGACGCG GAGATCTACCTGATCTGCGGCGCGGGCGGGCAGGCGGCTTTGGCGGGCAAGACGTTGCAGGATATGGGCTTTTCCAACGT CACGAATATCGGTGGTTTCCCCGCCTGGAAGGACGCGGGCGGCCCGGTGGAGGCGTGA
Upstream 100 bases:
>100_bases CAGATGGTCGATCACATCGTCGAACAGGTCGAAAAACGCGCCGAGGCCATTGAGGCCCAGGCCAAAGCGGCAGACCAGGC CGCAGAATAGGGAGCACGCG
Downstream 100 bases:
>100_bases GGCGCAGGGTGTGATCCCAGGCGCTCCCGTGCCCGCGAGATGCACAGCATCCCGCGGGCTGTGGGCGTGGCGCGCCGGGC GGGCAAGCCCGCGTCGGCGC
Product: rhodanese-like protein
Products: NA
Alternate protein names: Rhodanese Domain Protein; Rhodanese-Like Protein; Rhodanese-Related Sulfurtransferase; Rhodanese Domain Protein Sulfur Transferase; Rhodanese-Like Domain-Containing Protein; Sulfide Dehydrogenase; Molybdopterin Biosynthesis Protein; Rhodanese-Like Domain Protein; Metallo-Beta-Lactamase Family Protein; Rhodanese-Domain Protein; Rhodanese/Moeb/Thif Domain Protein
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MKTAKDYMDAANASVPKLSAEEAIAKHGAGQGTFIDVRDSGDIAASGTIAGAHRVPRGMIEFRADPAVEALYDPVFQKDA EIYLICGAGGQAALAGKTLQDMGFSNVTNIGGFPAWKDAGGPVEA
Sequences:
>Translated_125_residues MKTAKDYMDAANASVPKLSAEEAIAKHGAGQGTFIDVRDSGDIAASGTIAGAHRVPRGMIEFRADPAVEALYDPVFQKDA EIYLICGAGGQAALAGKTLQDMGFSNVTNIGGFPAWKDAGGPVEA >Mature_125_residues MKTAKDYMDAANASVPKLSAEEAIAKHGAGQGTFIDVRDSGDIAASGTIAGAHRVPRGMIEFRADPAVEALYDPVFQKDA EIYLICGAGGQAALAGKTLQDMGFSNVTNIGGFPAWKDAGGPVEA
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12871; Mature: 12871
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTAKDYMDAANASVPKLSAEEAIAKHGAGQGTFIDVRDSGDIAASGTIAGAHRVPRGMI CCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCEEECCCCCCCHHCCCCCE EFRADPAVEALYDPVFQKDAEIYLICGAGGQAALAGKTLQDMGFSNVTNIGGFPAWKDAG EECCCCHHHHHHHHHHCCCCCEEEEECCCCCCEECCCCHHHCCCCCCCCCCCCCCCCCCC GPVEA CCCCC >Mature Secondary Structure MKTAKDYMDAANASVPKLSAEEAIAKHGAGQGTFIDVRDSGDIAASGTIAGAHRVPRGMI CCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCEEECCCCCCCHHCCCCCE EFRADPAVEALYDPVFQKDAEIYLICGAGGQAALAGKTLQDMGFSNVTNIGGFPAWKDAG EECCCCHHHHHHHHHHCCCCCEEEEECCCCCCEECCCCHHHCCCCCCCCCCCCCCCCCCC GPVEA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA