Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054342

Identifier: 89054342

GI number: 89054342

Start: 1837997

End: 1838929

Strand: Reverse

Name: 89054342

Synonym: Jann_1851

Alternate gene names: NA

Gene position: 1838929-1837997 (Counterclockwise)

Preceding gene: 89054343

Following gene: 89054341

Centisome position: 42.59

GC content: 64.84

Gene sequence:

>933_bases
ATGCGCGCCCCGGCCCTGATCTCTTTGGCGGCGGCGCTGGCCCTTTCGGCCTGCGTCACGATGCCTGTGGAGACCTCCCC
CCGGCCTGCGCCTAGGGCGGAGGTGCCGGACGTGTCTGCGACCCCGTCGGAACTCAGCCAAAGCCTCGCGCGCTATTATC
GCAGCACCGAGGCGCGCCTGGTGGGACGTGGGCTGTTGCGCACCGATGGCGGCGGGCCTGACACTCCGTTCAGCGCCGAA
CAGCTGGCCGCGAACTTTGAACGCATCGCGCTTTATGATGAATACCAACTGGTGGGCGGGCGTTTCGTGGCGCGCCAGAC
GCCCTCCACCCTGCGCCGCTGGCGCGCGCCTGTACGCGTTCAGCCCCATTTTGGCGCGTCGGTGGAAGCAGGCCAACAGG
CCGAGGACCGGTCCGCCCTTGCGACCTACACAAATCGGCTGTCTCGCGTGACCGGACACCCGATCCGAACGGTGGATGCG
GGCGGCAATTACCATGTATTGTTCATGAATGCCGACGCGCTGGCCGCCTCGGCCCCGGTGTTGCGAGAGCTTGTGCCAAG
CATCAACGACGCCACGATCCGGGAAATCCAGAACATGGGCCGCCTGACCTATTGTTCGATCTTCGCTTTCTCGCCGAGCG
GCACCTCTGAGTATATCACCGCGATCGCAGTGATCCGCGATGAGCATCCCGATCTGATGCGCCGCTCGTGCATCCATGAG
GAAATTGCGCAAGGCCTGGGCCTGCCCAATGACAGTGCCGCCGCGCGACCCTCTATCTTCAATGACGACGAGGAATTCGC
GCTGCTGACGCGCCACGATGAGCTTTTGCTGCGGATCCTGTACGATGACCGCCTAACCATCGGCCTGACGCCCGACGCGG
CACGCGGCATCGTGCGCCAGATTGCGGCTGAACTTGTCGGCGGCCCGTCATAG

Upstream 100 bases:

>100_bases
GAGCTGCGCGACACGCTGTCCTCGGCCTCGGCCAGGCGTCCGGTGGCCGATGCCGATGTCATCGAGGGCACTGCCACGCC
CGCGCAGTCGTAAGGCTCCA

Downstream 100 bases:

>100_bases
CACCCTTCTGAGCGCTGCCCTTCGGGCGCGTCCCTCCTCGCGCGCTGCGCACGCTCCTCGCAGGTCTCACCGCGCCTGCG
GCGGGCTTACACCAGATTTG

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MRAPALISLAAALALSACVTMPVETSPRPAPRAEVPDVSATPSELSQSLARYYRSTEARLVGRGLLRTDGGGPDTPFSAE
QLAANFERIALYDEYQLVGGRFVARQTPSTLRRWRAPVRVQPHFGASVEAGQQAEDRSALATYTNRLSRVTGHPIRTVDA
GGNYHVLFMNADALAASAPVLRELVPSINDATIREIQNMGRLTYCSIFAFSPSGTSEYITAIAVIRDEHPDLMRRSCIHE
EIAQGLGLPNDSAAARPSIFNDDEEFALLTRHDELLLRILYDDRLTIGLTPDAARGIVRQIAAELVGGPS

Sequences:

>Translated_310_residues
MRAPALISLAAALALSACVTMPVETSPRPAPRAEVPDVSATPSELSQSLARYYRSTEARLVGRGLLRTDGGGPDTPFSAE
QLAANFERIALYDEYQLVGGRFVARQTPSTLRRWRAPVRVQPHFGASVEAGQQAEDRSALATYTNRLSRVTGHPIRTVDA
GGNYHVLFMNADALAASAPVLRELVPSINDATIREIQNMGRLTYCSIFAFSPSGTSEYITAIAVIRDEHPDLMRRSCIHE
EIAQGLGLPNDSAAARPSIFNDDEEFALLTRHDELLLRILYDDRLTIGLTPDAARGIVRQIAAELVGGPS
>Mature_310_residues
MRAPALISLAAALALSACVTMPVETSPRPAPRAEVPDVSATPSELSQSLARYYRSTEARLVGRGLLRTDGGGPDTPFSAE
QLAANFERIALYDEYQLVGGRFVARQTPSTLRRWRAPVRVQPHFGASVEAGQQAEDRSALATYTNRLSRVTGHPIRTVDA
GGNYHVLFMNADALAASAPVLRELVPSINDATIREIQNMGRLTYCSIFAFSPSGTSEYITAIAVIRDEHPDLMRRSCIHE
EIAQGLGLPNDSAAARPSIFNDDEEFALLTRHDELLLRILYDDRLTIGLTPDAARGIVRQIAAELVGGPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33650; Mature: 33650

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAPALISLAAALALSACVTMPVETSPRPAPRAEVPDVSATPSELSQSLARYYRSTEARL
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VGRGLLRTDGGGPDTPFSAEQLAANFERIALYDEYQLVGGRFVARQTPSTLRRWRAPVRV
HHCCCEECCCCCCCCCCCHHHHHHCHHHEEEEHHHHHHCCEEEECCCHHHHHHHCCCCEE
QPHFGASVEAGQQAEDRSALATYTNRLSRVTGHPIRTVDAGGNYHVLFMNADALAASAPV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCHHHHHHHH
LRELVPSINDATIREIQNMGRLTYCSIFAFSPSGTSEYITAIAVIRDEHPDLMRRSCIHE
HHHHHCCCCHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
EIAQGLGLPNDSAAARPSIFNDDEEFALLTRHDELLLRILYDDRLTIGLTPDAARGIVRQ
HHHHHCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHCCCCEEEEECCHHHHHHHHH
IAAELVGGPS
HHHHHHCCCC
>Mature Secondary Structure
MRAPALISLAAALALSACVTMPVETSPRPAPRAEVPDVSATPSELSQSLARYYRSTEARL
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VGRGLLRTDGGGPDTPFSAEQLAANFERIALYDEYQLVGGRFVARQTPSTLRRWRAPVRV
HHCCCEECCCCCCCCCCCHHHHHHCHHHEEEEHHHHHHCCEEEECCCHHHHHHHCCCCEE
QPHFGASVEAGQQAEDRSALATYTNRLSRVTGHPIRTVDAGGNYHVLFMNADALAASAPV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCHHHHHHHH
LRELVPSINDATIREIQNMGRLTYCSIFAFSPSGTSEYITAIAVIRDEHPDLMRRSCIHE
HHHHHCCCCHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
EIAQGLGLPNDSAAARPSIFNDDEEFALLTRHDELLLRILYDDRLTIGLTPDAARGIVRQ
HHHHHCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHCCCCEEEEECCHHHHHHHHH
IAAELVGGPS
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA