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The map label for this gene is ydjI [H]

Identifier: 89054341

GI number: 89054341

Start: 1836588

End: 1837697

Strand: Reverse

Name: ydjI [H]

Synonym: Jann_1850

Alternate gene names: 89054341

Gene position: 1837697-1836588 (Counterclockwise)

Preceding gene: 89054342

Following gene: 89054340

Centisome position: 42.56

GC content: 60.45

Gene sequence:

>1110_bases
ATGGCCATTATGGATTTTCTCAAAGGTCAATTTATTGACGTCATCGAATGGACCGATGATAGCCGGGACACGATGGTCTA
TCGCTTCGAGCGCTATGGCCATGAAATCAAGTACGGTGCCAAGCTGACGGTGCGCGAAGGCCAGGTTGCGGTCTTCATCC
ACGAAGGCCAGCTGGCCGACGTCTTCACCCCCGGTCTCTATATGCTCGAGACCAACAACATGCCGATCATGACGTCCCTT
CAGCATTGGGACCATGGCTTCAGCTCTCCGTTCAAGTCCGAGATCTACTTCGTGAACACGTCGCGGTTCACGGACCTCAA
GTGGGGCACGAAAAACCCCATCATGATCCGCGACAGCGATTTCGGCCCCACGCGCATCCGCGCCTTTGGCACCTACACCG
TGAAGGTGAAGGATGCGGGCCTGTTCATGACGGAAATCGTGGGCACGGACGGCGAGTTCACCACCGACGAGGTGACGCAC
CAGATCCGCAACATAATCGTGCAGCAGTTCAGCCAGGCCGTCGCGGGCTCGGGCATTCCGGTCCTTGATATGGCGGCGAA
TACCGGCCAGATGGGCGAGGTCGTGGCCGAGAAGATCTCTGCCACTATCGGCTCCTACGGTCTGACCTTGCCGGAGCTGT
ATATCGAAAACATCTCCCTGCCGCCCGCGGTGGAAGAGGCGTTGGATAAGCGGACATCCATGGGTGTTGTGGGTGACCTG
AACAAATACACCCAGTTCCAGACGGCAGAGGCGATGCGCGCGGCCGCCGAAAACCCCGGCGGCGGTGGCGGCATGGGCGA
AGGTCTTGGCATGGGTATGGGTATGGCGATGGCCAACCAGATGGCCAATAACATGCATCAACCGCACCAGGCCGCGCACG
CAGCCCCTCCGCCGCCCCCGGTGGAGCATGTCTGGCACACGGCCGAGAACGGGGCCACGAAAGGCCCGTTCTCCAAGGCG
TCGCTCGGTCAGATGGCAAACGACGGCTCCCTCACCCGTGATACGATGGTCTGGACCGCAGGCCAGGACGGTTGGAAAAA
GGCCGGTGATGTGGATGAGCTGGCGCAGCTGTTTACCGTCATGCCGCCCCCTCCACCGCCGCCGATGTAA

Upstream 100 bases:

>100_bases
CAGATCAGGTTTCCCTCCCCCACTTCCCTGTAGATTGGCACGCGCCATACCTATATCATCTGGGAAAACAGACACCTTTC
AGCGTGGGAGTAGCCGCCAC

Downstream 100 bases:

>100_bases
GTCCGACAACTTGACCGAAATGACCGCTCCGGTGCCAAACGCGCCGGGGCGGTTTTCCGTTGTGACTGTTTCACAAAAAA
TAAACGAAACGGCCCTATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 368

Protein sequence:

>369_residues
MAIMDFLKGQFIDVIEWTDDSRDTMVYRFERYGHEIKYGAKLTVREGQVAVFIHEGQLADVFTPGLYMLETNNMPIMTSL
QHWDHGFSSPFKSEIYFVNTSRFTDLKWGTKNPIMIRDSDFGPTRIRAFGTYTVKVKDAGLFMTEIVGTDGEFTTDEVTH
QIRNIIVQQFSQAVAGSGIPVLDMAANTGQMGEVVAEKISATIGSYGLTLPELYIENISLPPAVEEALDKRTSMGVVGDL
NKYTQFQTAEAMRAAAENPGGGGGMGEGLGMGMGMAMANQMANNMHQPHQAAHAAPPPPPVEHVWHTAENGATKGPFSKA
SLGQMANDGSLTRDTMVWTAGQDGWKKAGDVDELAQLFTVMPPPPPPPM

Sequences:

>Translated_369_residues
MAIMDFLKGQFIDVIEWTDDSRDTMVYRFERYGHEIKYGAKLTVREGQVAVFIHEGQLADVFTPGLYMLETNNMPIMTSL
QHWDHGFSSPFKSEIYFVNTSRFTDLKWGTKNPIMIRDSDFGPTRIRAFGTYTVKVKDAGLFMTEIVGTDGEFTTDEVTH
QIRNIIVQQFSQAVAGSGIPVLDMAANTGQMGEVVAEKISATIGSYGLTLPELYIENISLPPAVEEALDKRTSMGVVGDL
NKYTQFQTAEAMRAAAENPGGGGGMGEGLGMGMGMAMANQMANNMHQPHQAAHAAPPPPPVEHVWHTAENGATKGPFSKA
SLGQMANDGSLTRDTMVWTAGQDGWKKAGDVDELAQLFTVMPPPPPPPM
>Mature_368_residues
AIMDFLKGQFIDVIEWTDDSRDTMVYRFERYGHEIKYGAKLTVREGQVAVFIHEGQLADVFTPGLYMLETNNMPIMTSLQ
HWDHGFSSPFKSEIYFVNTSRFTDLKWGTKNPIMIRDSDFGPTRIRAFGTYTVKVKDAGLFMTEIVGTDGEFTTDEVTHQ
IRNIIVQQFSQAVAGSGIPVLDMAANTGQMGEVVAEKISATIGSYGLTLPELYIENISLPPAVEEALDKRTSMGVVGDLN
KYTQFQTAEAMRAAAENPGGGGGMGEGLGMGMGMAMANQMANNMHQPHQAAHAAPPPPPVEHVWHTAENGATKGPFSKAS
LGQMANDGSLTRDTMVWTAGQDGWKKAGDVDELAQLFTVMPPPPPPPM

Specific function: Unknown

COG id: COG4260

COG function: function code S; Putative virion core protein (lumpy skin disease virus)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 40287; Mature: 40156

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIMDFLKGQFIDVIEWTDDSRDTMVYRFERYGHEIKYGAKLTVREGQVAVFIHEGQLAD
CCHHHHHCCCEEEEEEECCCCCCCEEEEEHHCCCEEECCCEEEEECCEEEEEEECCCEEE
VFTPGLYMLETNNMPIMTSLQHWDHGFSSPFKSEIYFVNTSRFTDLKWGTKNPIMIRDSD
CCCCCEEEEECCCCCEEEHHHHHCCCCCCCCCCEEEEEECCCEEECCCCCCCCEEEECCC
FGPTRIRAFGTYTVKVKDAGLFMTEIVGTDGEFTTDEVTHQIRNIIVQQFSQAVAGSGIP
CCCCEEEEEEEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
VLDMAANTGQMGEVVAEKISATIGSYGLTLPELYIENISLPPAVEEALDKRTSMGVVGDL
EEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCEECC
NKYTQFQTAEAMRAAAENPGGGGGMGEGLGMGMGMAMANQMANNMHQPHQAAHAAPPPPP
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCC
VEHVWHTAENGATKGPFSKASLGQMANDGSLTRDTMVWTAGQDGWKKAGDVDELAQLFTV
HHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCC
MPPPPPPPM
CCCCCCCCC
>Mature Secondary Structure 
AIMDFLKGQFIDVIEWTDDSRDTMVYRFERYGHEIKYGAKLTVREGQVAVFIHEGQLAD
CHHHHHCCCEEEEEEECCCCCCCEEEEEHHCCCEEECCCEEEEECCEEEEEEECCCEEE
VFTPGLYMLETNNMPIMTSLQHWDHGFSSPFKSEIYFVNTSRFTDLKWGTKNPIMIRDSD
CCCCCEEEEECCCCCEEEHHHHHCCCCCCCCCCEEEEEECCCEEECCCCCCCCEEEECCC
FGPTRIRAFGTYTVKVKDAGLFMTEIVGTDGEFTTDEVTHQIRNIIVQQFSQAVAGSGIP
CCCCEEEEEEEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
VLDMAANTGQMGEVVAEKISATIGSYGLTLPELYIENISLPPAVEEALDKRTSMGVVGDL
EEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCEECC
NKYTQFQTAEAMRAAAENPGGGGGMGEGLGMGMGMAMANQMANNMHQPHQAAHAAPPPPP
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCC
VEHVWHTAENGATKGPFSKASLGQMANDGSLTRDTMVWTAGQDGWKKAGDVDELAQLFTV
HHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCC
MPPPPPPPM
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9455482; 9384377 [H]